Os12g0278900

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Revision as of 10:27, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0278900| Description = Peptidase C1A, papain family protein| Version = NM_001073102.1 GI:115488165 GeneID:4351979| Length = 4079 bp| Defin...")
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Gene Name

Os12g0278900

Description

Peptidase C1A, papain family protein

Version

NM_001073102.1 GI:115488165 GeneID:4351979

Length

4079 bp

Definition

Oryza sativa Japonica Group Os12g0278900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:10453533..10457611

Sequence Coding Region

10456308..10456616

Expression

GEO Profiles:Os12g0278900

Genome Context

<gbrowseImage1> name=NC_008405:10453533..10457611 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:10453533..10457611 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgacattatcacttttttttttgtatttaccgatagatgatccagccacctgcttcgctcacgacgagaaggactttgagtcgaatgaaaccgtttgggcactgtacgagcggtggtgcagcttccatagtgcggagcacgaccacgatgacatggtccggtggttcggatgtttcaaggacagagcgcgcagaattatcgagttcaacaagtctagcaagccttataagtggggggttggggcctgggggctcaacatatttgatgatatgaccccggaggagctcttcgaatttgggaataattaa</cdnaseq>

Protein Sequence

<aaseq>MTLSLFFLYLPIDDPATCFAHDEKDFESNETVWALYERWCSFHS AEHDHDDMVRWFGCFKDRARRIIEFNKSSKPYKWGVGAWGLNIFDDMTPEELFEFGNN </aaseq>

Gene Sequence

<dnaseqindica>996..1304#ggaatcgcctcgcatccggcacttgctatggccgccgccgccgggactccgccgccgccgccgccgcacgccccgtcgggcccactcgtcatactccggtgacgccgcgcgatgatccccggcgaccactcctccggacccgcggaattatcccccgattgctttgaccctgaagctccaggtaacctaatcgatctcgcgctaaattgcaactttttttctccaattaaggacattgtcatcatgatgatcatactccttcaattcttttgtactccctccgtccccaaaaaactcaaccagtattggttttgatgttttctgtgtccatattcgttgtactataaaacgtcccatctaatattaggttgagtttttttaggacggatagaaaacgtcccatccaatattagtttgagttttttttttgggacggagggagtaattgtcacgattatcaggtaatatcgtcaataatatgacatctcttttaaggacctaattttttcttttaacacaagacgaatgatcaatatttaaatatcagtaacgtttggtgacaagtaatggagggagcatctgttaaactgagttcgtgagagatcagagcacaccaactgacccaaactcaattttgtttgtgagatataaaactaacaaaatttcgaccaattttgtttcctgatttgaaatttgcttctttttttaatatatctcacaaagtaagttgagtttggataatattttttacatgattttgtaccattatctcatctacgcaggtgtgatttttttctttttgaatttagacaaatttttgtatcaatgtttacataaattttcatctggttggcttctggctacgtatttatcatgaaacctcattatatggcactgacaggtggatccgtggccattgtatctgacggttgaagatatatttatccatttaaccccacacgcgctatgtactttgcgctctctctctcctctacatgacattatcacttttttttttgtatttaccgatagatgatccagccacctgcttcgctcacgacgagaaggactttgagtcgaatgaaaccgtttgggcactgtacgagcggtggtgcagcttccatagtgcggagcacgaccacgatgacatggtccggtggttcggatgtttcaaggacagagcgcgcagaattatcgagttcaacaagtctagcaagccttataagtggggggttggggcctgggggctcaacatatttgatgatatgaccccggaggagctcttcgaatttgggaataattaactatttgccacttttacaagtagttctaaaggatttgccattgaacccacacgtcatagacacatgagggcccacatacatgtcatagatagcgagtggcaaattcttaattgttatatcttaaaagtgacaaatagttaaatgtcccccgaattcaagtgtccactgctcctgcaaaggacttactaatttaccaagaagcacttcagtgataatataatgttatactgattgatcatctgctagctactttaggttcagcctgagtaatctctactatacttaaaaagaagcctagtggtggtcttgaatccttaccaggcagacctgcgaagtgtgaaccattcgatctccaaatccaacggctcagatcgagttaccccttgttcgcacgcccaccacatccccgtcgttcgcacgcccctattcccccgtttctcttcccctcggccacctttaacgccgcaccctaatcgccactcgcgccatctcccacctcgttggtaccctccggcgcccccaatctctggttcgtcaaccacctccgcgagcgctgcccccaacttccggctcgtcaaccacctccgtgcgcgccgcgggaacaccaacgaccacgccgccaccgattcggagtcgccttgacgacatctcatcagatactaactgttatccagtgaaagttatccttagcaaaggtatattgttacacacttctgcttccatatttttcgcttttctctgaggaatatctggcattatattgtcatttctatgctttttgcatcaacattgtatcctacaacaaaatttactgtttagactggactatatgagattcctttcaaatgtagtttgcactctgaattacagaattctgttcagtaagccaaacataaagttcaagatgatattgtgtgtatagccatgtattcttaatacataatcaggaccaacatcaatgccaagctcagttgtatttctacgtgatatcgcatttctttagcatgcaccgaacatttgtcaagtcctcttttgacaatctgtgatggatgggtaaaactgtaaatgtagtttacctactgtatgttgaaccatttgacttatttggaatttggacataggagtatcatgtccatcacagtattagatccatatggttattctggatggttatagacctacagaatgatagtattgcagatttgcagtgatgtgtccactggatttttcgctattagttggttttgtaatgttttgcagcttagtactgatttttcgctattagttggtttgtatttgtaatgttttgcagcttagtactgatgttagcagatttctgaggttctgctttagttcagatttccaattgcagtttagaattttttgtaatcatgtagttgcagtccagtttccagtggggtactgaatttccacttgagtggagatcgtctgaactgaaagccaacatttgagctcatgctattagcctattactgtatcaaataaaactttgttctttatcaaagaagccttatcagattggtggatcaccaccaccgacggtaggtaagctccatcccttttgttctatccaaaattccacgaagatcaggttatggaatgagatgaactaatacatctggattggtgagatcagggtgaatggggatgttttttttttcagttttgggatgtttctcatttaagtgtgatggttatattgaactataatgcaggcaacactggcccttgatgtttttttctgaaacaaaaactgtcagattatatcgatcaatcagtattaactttggcaacataataggctcacggggaaaggaaactccctcacggattcttcaattaggagggactgcatattcaggtactgtatattgtgcctgtatgtttttattacattttgctaaagggatactcattaaattgaagtacatgattgtgggaggagaacatgtgaaatgcacattgctgccttttttttatcagataaccgttcatatgtaggtttcagatatgctttgatggtatcatatccttcttatatacttcatctcataaggttccaacgtacacttctatactttaacagaaaaggtttttataactgccatgctgctgcttgaaattaaaaaacttgacaaaatattttgtatcatttaacagaagaaacaagagatttccaatatactctcaacctgcctgcaagttattttctattatttatcttattggcaaattactctgacaaactcatttttagttatagaatggaaatttttgtacttttggtcctcttattttaaatcatgtcaaacgttcaaaggtttatgttaagtggtgacttgatgggatttttttttttcttcagccgctctctgctgcttagtggatactggatttgatttatgcaatgatcacatcagagagaaatattatctgatagacaatcaagaggttttaggttttcagataaaatttagatcattgctcaaaaagaaaacaacatagtgcttggttactatgcagtcccttctgtagcaaaactagcaatacatcatgccaaataatcaacttggaattcaatgttgtgccttctataagagagttaaatagtttagaagaatatgggtcagaattattattattgatttgcttctgttgtttgctactgtaccatcctattctgttaatgtacagtaaattgtgtaattttatgtaacaattaaatctgaatactattataacaatggtatcttg</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0278900, RefSeq:Os12g0278900