BGIOSGA011071

From RiceWiki
Revision as of 09:25, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA011071| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA011071, complete gene.| tag = OS03G02...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA011071

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA011071, complete gene.

LocusTag

OS03G0260100

Ensembl Transcript ID

BGIOSGA011071-TA

Ensembl Protein ID

BGIOSGA011071-PA

Length

5131

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:8972535..8977665

Sequence Coding Region

8977395..8977665,8975180..8975421),complement(8972737..8974257,8972535..8972657

Genome Context

<gbrowseImage1> name=IndicaChromosome03:8972535..8977665 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:8972535..8977665 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCCTCGCACCTCCGCTCCCCGCTGGTGCTTCTGCTGCTGCTCGCCCTCCACCGGCTGTGTGCCCCGTGGCTGGTGGTCGCCGACGACGGCGCCTCGGTGGCGAGGTCGGCCTTCTCCATGGACGGCGACGTGGCGTGGGTGGTGCAGGTAAGCGACCTCCACATCAGCGCCTACCACCCCGACCGCGCCGACGACCTCGCGAGCATCCTCGGCCCCGCCCTGCGCGCCATCCGCCCCCACCTGCTCCTCGTCACCGGCGACATCACAGATGCAAAGAATAGGAGAAAAACTACGTCAAGACAAGATGAGAGGGAATGGATTACATACAAAAAAGCTATTGATGCAATTGTTGGAATAGGTGGTATTGATAAGAGCAGGATATTTGATATTAGAGGTAATCATGATACATATGGAGTTCCCTATAGGGGAGGAAAATTGGATTTCTTCTCAACTTACAGTGTGAACTCACAGCTTGACCGATTAAGCACCATCAGTAGCATTTTGCTTCAGGGACGCAGGAATTATCTCTTCCTTGGCATAGATGATACAATGAGTATTGGCATTCGATATCCAGCTAATTTATTTGGCCATCCTACTGATAAGAGGATAGACGCTGTTAATTCAGAACTTCAATACTGGTCCAATCATTCCAATGTTCCAATAACAAAAGTAGTTTTTGGACATTACCCTATGTCATTCACTACTTCATCTCAAAAAGGACAACGTTATGAAAGTATATTTGCAAAGCAGTCAATTTCAGCATACCTATGTGGCCATCTGCACGCGAAAATTAGTAAGCAGCTTTGGCAGTTTCATGAAATGAGTGCAACAACACAAGAGCAGAAATCAAGCTATTGGGAATGGGAACTTGGAGACTGGAAAGAGTCAAGACTGATGAGGATTTTAGCAATTGATGGAGGTGCAATCTCTTTCATAGACCACACACTAAAACAGGCATTCCAAACTTCCATCTTGATCACATACCCAACAGATTCAAGAAGTATGAATACATTGGAATCAATGAATTGGTCAACGAGAAATGATATAAATGTTCTTGTTTTCTCTAATCAGGTGATCCGCAATGTGAGTGCAAGAGTTTTTGACTCTCATAATGAGTTTAAGATAGTTGAAGAAATACCACTGCAGCTTGTTGCCACACCATCTGTTCACAAACCTTTGTTCCATGCGGAATGGAATGCTGAAAACTACAAAAGTCCATCCCCTACTCGCTACTGGTTGCAAGTTTTTGCTCAGGATTCTCAGGGTGGGAAGACATCAAGCGAGCGACGACCATTTTCAGTTGAGGGTAAAGTGCAAATTCAATCACGTCCATGTCTGAACTACTTGATTTTTGAAGTCCAATGGGAAGACATGTATCAAGTTCTTCTGTGGAGTAATTTTGCCTTCATAATTGTACTATTGTTTGCTCCCAAATTGCTGTATCATTTTATGAAAAAAAGTTTGACATACCAAAGATGGACCGTGTCAGTTATGCTATCCCCTATCCAGCCGAGGAAAGCTTACTTTTGGTTGGTCTGGTTTCTAATGGAGGGTGCAAGGAGTAGACCCATCTGGTTTTCTTTGCTCATATATGTTATTTGGCTTATTGAAATGCCATGGTTTTGGGGTCATGCGACATCTGAGAAAGGAGAAATTGCTCAAATGTACTTATCCGGATGGAGCATCCCATCTCTTGGTGAAGACTTGACCTGGAACAAATCGAGCAACCCAGATGTGCTGGTTATTACACTGCCTTTCCTATACCTGGTGGTTGTCCCTGTTGTAGTTGTAATATATAGTTTGTTTGCAGAGAAGGCTGTTGCTTGTTTGCGGCACAGCAGAAGAACAGAAAACACGGTCAACCCAACAAATTCAAACCCTGAGTCAAGATATCTACTGCCAAGTGCTTCAGTGTCTTTAGCGAACCTCTCAGACAAGAAAATTCTCTCAATGGTAATGAAATTCTGTGGCGGCTGGACAAGGAGGGTGCTCCTATTGTTGTGCTGTATCATTGCGGTGATACATTTGAAGCTTTCCTCAAGGCTAATGTCAGCTTATGGAGCCAAACCAGTAGCCTTTTCTCCTCCAGTAACGTGGATGCCGTTGTTATTATTAAGTGCTACTGCCTATTGTACAATGCCCAACACATATTAG</cdnaseq>

Protein Sequence

<aaseq>MASHLRSPLVLLLLLALHRLCAPWLVVADDGASVARSAFSMDGDVAWVVQVSDLHISAYHPDRADDLASILGPALRAIRPHLLLVTGDITDAKNRRKTTSRQDEREWITYKKAIDAIVGIGGIDKSRIFDIRGNHDTYGVPYRGGKLDFFSTYSVNSQLDRLSTISSILLQGRRNYLFLGIDDTMSIGIRYPANLFGHPTDKRIDAVNSELQYWSNHSNVPITKVVFGHYPMSFTTSSQKGQRYESIFAKQSISAYLCGHLHAKISKQLWQFHEMSATTQEQKSSYWEWELGDWKESRLMRILAIDGGAISFIDHTLKQAFQTSILITYPTDSRSMNTLESMNWSTRNDINVLVFSNQVIRNVSARVFDSHNEFKIVEEIPLQLVATPSVHKPLFHAEWNAENYKSPSPTRYWLQVFAQDSQGGKTSSERRPFSVEGKVQIQSRPCLNYLIFEVQWEDMYQVLLWSNFAFIIVLLFAPKLLYHFMKKSLTYQRWTVSVMLSPIQPRKAYFWLVWFLMEGARSRPIWFSLLIYVIWLIEMPWFWGHATSEKGEIAQMYLSGWSIPSLGEDLTWNKSSNPDVLVITLPFLYLVVVPVVVVIYSLFAEKAVACLRHSRRTENTVNPTNSNPESRYLLPSASVSLANLSDKKILSMVMKFCGGWTRRVLLLLCCIIAVIHLKLSSRLMSAYGAKPVAFSPPVTWMPLLLLSATAYCTMPNTY</aaseq>

Gene Sequence

<dnaseqindica>1..271#2245..2486#3409..4929#5009..5131#ATGGCCTCGCACCTCCGCTCCCCGCTGGTGCTTCTGCTGCTGCTCGCCCTCCACCGGCTGTGTGCCCCGTGGCTGGTGGTCGCCGACGACGGCGCCTCGGTGGCGAGGTCGGCCTTCTCCATGGACGGCGACGTGGCGTGGGTGGTGCAGGTAAGCGACCTCCACATCAGCGCCTACCACCCCGACCGCGCCGACGACCTCGCGAGCATCCTCGGCCCCGCCCTGCGCGCCATCCGCCCCCACCTGCTCCTCGTCACCGGCGACATCACAGGTGAGGGGCGAGCCCCCTTCTCATGTATCGTCAAATTTGATTAAAAAAAAGTCACGAATTGTTCCTTCATGCATCCATTTTGTACAGTTGTTTGGTAAGGAGCATGGCAACTGCCGAGAAATAGACCGTATCTACTCTGGTTTTGACATATTGCAAGTGATCGGTGTTGAGTGGTATTGTTATATGTGGGAAATAGCAGTATATAAACTCGATTAGCTATGCTGTGAACGTAGAATCAACTTCCGTATAAGCTGTGAACTCGATTAGCTATGTGGGAAATTATGCTCACAGCATGAGCTTTTTGTTACAGTTGTGCGGTTAAATGCGCATGTACTTCTGAACTAATCCCATCTAGTACATGATGGCACTGACTACGAAGGAATATCATGTTCTGTTAATGAGAATCTGCAGAAAATTCTGATTCATTTCCATGTAGCGTAGGCAGGTTGAATTTGTATTTGTGGTTGCCAAGTATTGCCTAAAAAGATCAAATGATACAGTAACTCAGAGTCCATGGCTCCATGCCATGAAACTTCAGAATAGCTTCATTAGTTAATGCAAGGTAAAGCATACAACTTACAAACTACCATAAGGTTAGTAGATCATTTTTCTAATAAACTCAGCTAGCGTAACATCCATAAACATATTCTGGAAATATCCTGGAGTTATTGGCCTAACATTCATTTCAACTATTTGCATGAAGAATATGACTCTGAATTTGTTGTATAAACCATTAAATTCTCCAATATCGTATCTAATGGCGACATACATGAAAGCTGCTTTGTTACAACAAATGGAGATAAATCCCAAATCACTTGAAAACATTACTAACTGTATTTTTTTTTTTAGATAATGGAAATGTGTTACATCTCCGGCCTCTGCCTGTACGCACGCAGCCAAAAAATTCAGACGTGAACAGAAAAGTTAAAAAAGGCAAGATGGGACAAACCCCCAACTTCTGCCGATGATATGATCTACTAAAATAATATTTTTTTTCAAAATCACGTAAATTCTATCACGAAATTCTGTAGGTACTACGCCATCCAAAATAGAATAAAAGTTCCTTGGCTACTAATTCCAATCGTGTAGCACCATTGCGCATAGTATCCTGTTGTTTCTGTGAAAGCATCATACACCAAGAGTGGAGCCAATTGGAACACATGAAGATAACCTGCATGATGTTAGGCATTTTTTTATGGTTAAAAACTATATCATTACGGCAACGCCAAATTGACCAACATAAAGCACTAGCTCCAAACAAAATCATTTTTTTTGTGGGTCTAGGCACTCCCCTTAGCCAGTCACCAAAAATATCTTTTGCATTGTGGGGAGGGGGGATGTTGAAGGCAAAGAAGACACATCGCCAAGCAAAACGTGCAACATGACAGTCAAAGAAAAGATGTTGGATGGTCTCTTGTGTATTACAAAAACAACATTGCTTGTTTCCCCTCCAATTTCTCTTTATGAGATTATCTTTTGTCAAGATTACTTTTTTGTGAAGAAACCACATAAATACTTTGATTTTTAGTGGTACCTTTACCTCCCATAAGATCCTCTTGTGGATTCTTATATTGGAATTGATGATCGCATTATACATGGATTTGACCGAAAAATGGCCATTTTTATGTAGCGACCAAATAAAGCAATCCTTTTCATTTGACAGGGTTATGTTAGCTAGTCGAGAGATCAGATCGGAAAATATTTATTTGTATGTGGAAGGTCAAATATTGGAAAGTTGATTTGGTAGTAAATTTGGATAACTTCAATTTTCGTCCCTTGCTATAATGCATTTCCTTTTTTCACCTTGAGTGTACATGTTAATTTGTTAGACAGAAAGCCCTTGCTAGAATAATAAGGAAATGAAACAAGCACATATATGGTTGATGCAATTGAATGTATATGTTGTTCTTGTAGTTTTATATATTCCTATGACTGTATAATAATTTCCAGTTTTTTCGTGGGATGTTAACAAGATGCAAAGAATAGGAGAAAAACTACGTCAAGACAAGATGAGAGGGAATGGATTACATACAAAAAAGCTATTGATGCAATTGTTGGAATAGGTGGTATTGATAAGAGCAGGATATTTGATATTAGAGGTAATCATGATACATATGGAGTTCCCTATAGGGGAGGAAAATTGGATTTCTTCTCAACTTACAGTGTGAACTCACAGCTTGACCGATTAAGCACCATCAGTAGCATTTTGCTTCAGGTACTCCTTATCTTCTTGTCTGATCTCCTTGTTAGGCACAATTAATTTTGTTCATAGTCGTTTATCATGACTTATTATTCGTCATGCGCATAATCCAGTGTACAGTTATCTTTCAATTAATCCAGTTCTATATTCTGCTTCTTTGAAGATGTAAAGCATACTATAACATATTTGCTGTCAGAGCTTCAGTTGAACATTGACCTGCACTTTATACCGCTGATTACTGTGCACAGAATTAATGCTCCTCTGCCTTGATTATTGAACGTCCTCTTTGGTTAGCTGGTAGAACAATATCTATTGGTCCATAATAAATATTACTCTCGTGTGATACTGGGCATGTAGTACTACAAATACATCATGCTTCAATATCATGCTTGAACATAGCACTAAACCATCTTACTCAATGGAGAACAGCTCTTGCTAACTAGACTTGACCATCAATTATAATTTACTAATAATTGCATTTATATGTAACAATAATGATGTAGTGTGCTATACTGATGTCAACGCACCTTCAGACTCGCTTAATGTACACTCAATAGCAGGACAGATGAAGGTGGCTATACATTCAGCACTTAAACCATAACTGGCCTGTGTCAACCTACAATGGTAGTTAAATTTACTAAACTATAACTCTATTTATCTTTGGCAGCTATTACGAATCAAATTATGTCTTATCTGTGCCTTATAATTTCCGTAACCCACTTTGTCTCTAGCACTTATATAGATTTCTAATGGTGTCATAACAGTACTAGAGGAGATTTTTTTTTTATGTTGGGCTATCTGTGCATAACACATTGTCTATGTTGGATTATCTGTGCATAATACATTGTCAAAATTCTTGTACCATTTATATGCCATGCATCTCTGCTAATTCTGCTTACAATGCTGGGCCTGAATTTTATCCTAAAAGGTACTGTAGGGACGCAGGAATTATCTCTTCCTTGGCATAGATGATACAATGAGTATTGGCATTCGATATCCAGCTAATTTATTTGGCCATCCTACTGATAAGAGGATAGACGCTGTTAATTCAGAACTTCAATACTGGTCCAATCATTCCAATGTTCCAATAACAAAAGTAGTTTTTGGACATTACCCTATGTCATTCACTACTTCATCTCAAAAAGGACAACGTTATGAAAGTATATTTGCAAAGCAGTCAATTTCAGCATACCTATGTGGCCATCTGCACGCGAAAATTAGTAAGCAGCTTTGGCAGTTTCATGAAATGAGTGCAACAACACAAGAGCAGAAATCAAGCTATTGGGAATGGGAACTTGGAGACTGGAAAGAGTCAAGACTGATGAGGATTTTAGCAATTGATGGAGGTGCAATCTCTTTCATAGACCACACACTAAAACAGGCATTCCAAACTTCCATCTTGATCACATACCCAACAGATTCAAGAAGTATGAATACATTGGAATCAATGAATTGGTCAACGAGAAATGATATAAATGTTCTTGTTTTCTCTAATCAGGTGATCCGCAATGTGAGTGCAAGAGTTTTTGACTCTCATAATGAGTTTAAGATAGTTGAAGAAATACCACTGCAGCTTGTTGCCACACCATCTGTTCACAAACCTTTGTTCCATGCGGAATGGAATGCTGAAAACTACAAAAGTCCATCCCCTACTCGCTACTGGTTGCAAGTTTTTGCTCAGGATTCTCAGGGTGGGAAGACATCAAGCGAGCGACGACCATTTTCAGTTGAGGGTAAAGTGCAAATTCAATCACGTCCATGTCTGAACTACTTGATTTTTGAAGTCCAATGGGAAGACATGTATCAAGTTCTTCTGTGGAGTAATTTTGCCTTCATAATTGTACTATTGTTTGCTCCCAAATTGCTGTATCATTTTATGAAAAAAAGTTTGACATACCAAAGATGGACCGTGTCAGTTATGCTATCCCCTATCCAGCCGAGGAAAGCTTACTTTTGGTTGGTCTGGTTTCTAATGGAGGGTGCAAGGAGTAGACCCATCTGGTTTTCTTTGCTCATATATGTTATTTGGCTTATTGAAATGCCATGGTTTTGGGGTCATGCGACATCTGAGAAAGGAGAAATTGCTCAAATGTACTTATCCGGATGGAGCATCCCATCTCTTGGTGAAGACTTGACCTGGAACAAATCGAGCAACCCAGATGTGCTGGTTATTACACTGCCTTTCCTATACCTGGTGGTTGTCCCTGTTGTAGTTGTAATATATAGTTTGTTTGCAGAGAAGGCTGTTGCTTGTTTGCGGCACAGCAGAAGAACAGAAAACACGGTCAACCCAACAAATTCAAACCCTGAGTCAAGATATCTACTGCCAAGTGCTTCAGTGTCTTTAGCGAACCTCTCAGACAAGAAAATTCTCTCAATGGTAATGAAATTCTGTGGCGGCTGGACAAGGAGGGTGCTCCTATTGTTGTGCTGTATCATTGCGGTGATACATTTGAAGGTGCGTACCTATCTAAAACACCATCTGCAGACTGTACCATCAATTTCATGTCTTAAATGTTGAATTGCATATCTTGCAGCTTTCCTCAAGGCTAATGTCAGCTTATGGAGCCAAACCAGTAGCCTTTTCTCCTCCAGTAACGTGGATGCCGTTGTTATTATTAAGTGCTACTGCCTATTGTACAATGCCCAACACATATTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA011071