BGIOSGA011080

From RiceWiki
Revision as of 09:25, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA011080| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA011080, complete gene.| tag = OS03G02...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA011080

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA011080, complete gene.

LocusTag

OS03G0256400

Ensembl Transcript ID

BGIOSGA011080-TA

Ensembl Protein ID

BGIOSGA011080-PA

Length

5010

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:8814037..8819046

Sequence Coding Region

8818932..8819046,8818520..8818801),complement(8818183..8818352,8817986..8818100),complement(8817724..8817779
,8817598..8817636),complement(8817421..8817519,8817127..8817189),complement(8816986..8817048
,8816822..8816904),complement(8816353..8816461,8816231..8816284),complement(8815720..8815807
,8815611..8815648),complement(8815209..8815314,8814381..8814547),complement(8814037..8814096

Genome Context

<gbrowseImage1> name=IndicaChromosome03:8814037..8819046 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:8814037..8819046 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCCGCCGCCACCTCCATCAACGCTGTCCCCTGCTCCGCTGGTCGGCCGAAGCGGAGGAGCCAGCGCCGCGGCGCCTCTACGGTCTCCGTGCGCGCGTCCGGCGACGCTAGCACCGTGACGCTGCTGGACTACGGCGCGGGCAACGTGCGCAGCGTGCGCAACGCCATCCGCCACCTCGGCTTCGGCATCCGCGACGTGCGCAGCCCGGAGGACATCCTCGCCGCCGACCGCCTCGTCTTCCCGGGGGTCGGCGCCTTCGGCTCAGCCATGGACGTCCTCACCCGCTCCGGGATGGCCGACGCGCTCCGCGAGTACATCCGCAGGGACCGCCCCTTCCTCGGCATCTGCCTCGGCCTCCAGCTGCTCTTCGACTCTAGCGAGGAGAATGGCCCGATAAGCGGCCTTGGTGTGATACCTGGAGTTGTCAGGCGATTTGACTCTTCGAAGGGTCTCATTGTGCCTCACATTGGCTGGAATGCTTTGGAGATCACCAAAGACACGCAGCTGCTCAAGGGAGCTGAAGGCCACCATGTGTACTTTGTTCACTCCTATCATGCTCTGCCTTCAGATGAAAACAAAGAGTGGATTTCTTCTGTATGCAACTATGGCGAGAGTTTCATATCATCCATCTCAATGGGCAACATTCAGGCAGTTCAGTTTCACCCAGAAAAGAGCGGAGCTACTGGGCTTTCAATTTTGAAAAATTTTCTCAGTCCAAACTCTTCAGGATCAAAGGTCCCATCTCGTAGGAAAGCATCGAACCTTGCAAAGAGAGTCATTGCATGTCTTGATGTTCGGTCAAATGATAGTGGGGATCTTGTGGTAACAAAAGGTGACCAGTATGATGTAAGAGACCATAGTAGTAGCAAAGAGGTAAGAAACCTCGGGAAGCCAGTGGATTTAGCAAGCCAGTACTACATAGATGGTGCTGATGAGGTTAGCTTCTTGAATATAACTGGTTTCCGTGACTTTCCGTTGGGAGATTTGCCAATGCTAGAGGTATTACGTTGTGCATCTGAGAAAGTATTTGTGCCACTTACAGTTGGTGGAGGTATAAGAGACTTCACAGATGCAAATGGGAGATACTACTCAAGTTTGGAAGTAGCGTCAGAGTACTTCAGGTCTGGTGCTGACAAGATTTCAATTGGTAGTGATGCCGTTTTTGCTGCTGAAGCCTATTTGCAGACTGGTGTAAAGACAGGAAAAAGCAGCTTGGAGCAAATCTCTAGAGTATATGGCAACCAGGCAGTTGTTGTAAGTATTGACCCTCGAAGAGTATATGTCAAGAATCCGGAAGAGGTGCAATTCAAAACTGTAAAGGTGTCCAATAAAGGTCCATTAGGAGAAGAATATGCATGGTACCAGTGCACAGTAAGTGGTGGGCGTGACAGCCGTCCTATAGGAGCATATGAACTAGCCAAAGCAGTTGAAGAATTGGGTGCTGGAGAAATACTTCTTAATTGCATTGATTGTGATGGCCAGGGCTGCGGATTTGACATAGATCTGGTAAAAATGGTGTCAGATGCTGTGACTATCCCTGTCATTGCAAGCAGTGGTGCTGGTACTGTCGAACATTTTTCTGAGGTCTTTGAGAAAACAAATGCTTCTGCTGCCCTTGCTGCTGGCATTTTCCATCGGAAAGAGGTTCCGATTTCAGCAGTGAAAGAGCATCTGGTAGATGCTGGCGTGGAGGTCAGAGTGTAG</cdnaseq>

Protein Sequence

<aaseq>MAAATSINAVPCSAGRPKRRSQRRGASTVSVRASGDASTVTLLDYGAGNVRSVRNAIRHLGFGIRDVRSPEDILAADRLVFPGVGAFGSAMDVLTRSGMADALREYIRRDRPFLGICLGLQLLFDSSEENGPISGLGVIPGVVRRFDSSKGLIVPHIGWNALEITKDTQLLKGAEGHHVYFVHSYHALPSDENKEWISSVCNYGESFISSISMGNIQAVQFHPEKSGATGLSILKNFLSPNSSGSKVPSRRKASNLAKRVIACLDVRSNDSGDLVVTKGDQYDVRDHSSSKEVRNLGKPVDLASQYYIDGADEVSFLNITGFRDFPLGDLPMLEVLRCASEKVFVPLTVGGGIRDFTDANGRYYSSLEVASEYFRSGADKISIGSDAVFAAEAYLQTGVKTGKSSLEQISRVYGNQAVVVSIDPRRVYVKNPEEVQFKTVKVSNKGPLGEEYAWYQCTVSGGRDSRPIGAYELAKAVEELGAGEILLNCIDCDGQGCGFDIDLVKMVSDAVTIPVIASSGAGTVEHFSEVFEKTNASAALAAGIFHRKEVPISAVKEHLVDAGVEVRV</aaseq>

Gene Sequence

<dnaseqindica>1..115#246..527#695..864#947..1061#1268..1323#1411..1449#1528..1626#1858..1920#1999..2061#2143..2225#2586..2694#2763..2816#3240..3327#3399..3436#3733..3838#4500..4666#4951..5010#ATGGCCGCCGCCACCTCCATCAACGCTGTCCCCTGCTCCGCTGGTCGGCCGAAGCGGAGGAGCCAGCGCCGCGGCGCCTCTACGGTCTCCGTGCGCGCGTCCGGCGACGCTAGCAGTAAGCCCCACTCGGACCACTCTCCCCTTCAATTCCGGAGCTCGAAGGCGTTTCACTTCACCCATGGCCTCACCGCCGCGTTCGCTTTGCTTTTGCTGCGCTTCGCTTCGCCGTCGATTCGACGCGACAGCCGTGACGCTGCTGGACTACGGCGCGGGCAACGTGCGCAGCGTGCGCAACGCCATCCGCCACCTCGGCTTCGGCATCCGCGACGTGCGCAGCCCGGAGGACATCCTCGCCGCCGACCGCCTCGTCTTCCCGGGGGTCGGCGCCTTCGGCTCAGCCATGGACGTCCTCACCCGCTCCGGGATGGCCGACGCGCTCCGCGAGTACATCCGCAGGGACCGCCCCTTCCTCGGCATCTGCCTCGGCCTCCAGCTGCTCTTCGACTCTAGCGAGGAGAATGGCCCGAGTAAAGCTCCTTCTCGCTCTCGCCTCATCGTTTGCTTGATTGCTGTTTGTTCCATTGCTAGCCTGCGAATGAACGATGGCCTCATCGTTTGCTGGATTACTAATCTGTTCCATTGCTAACCTGTGATTGAATGAACCGGAATTGATGGTATTTATTGTCCAATGCAGTAAGCGGCCTTGGTGTGATACCTGGAGTTGTCAGGCGATTTGACTCTTCGAAGGGTCTCATTGTGCCTCACATTGGCTGGAATGCTTTGGAGATCACCAAAGACACGCAGCTGCTCAAGGGAGCTGAAGGCCACCATGTGTACTTTGTTCACTCCTATCATGCTCTGCCTGTAAGGAACAGCTCTTTTTTAGATGCTCTTTCGTTAGTGGACTTATGGAATGTGAGTTATTTCTTTCTTTTCACATGCTTAGTCAGATGAAAACAAAGAGTGGATTTCTTCTGTATGCAACTATGGCGAGAGTTTCATATCATCCATCTCAATGGGCAACATTCAGGCAGTTCAGTTTCACCCAGAAAAGAGCGGAGGTAAAATGCAGTTTGATATTGAATGTGTTATGATATGCCATAGCCAAGTATGTACAATGTATTTTAAGACAGGATTGAAACATGTAGATTCTTGAGTTCTGATAACTTGACTGGTCTTGATCACCAAGGTCTGTTAATACTTAATAATGCAGAATATATAGATACTTAAGATTTTTCTAAGCATACCCATTATTGTTTTACTGCAGCTACTGGGCTTTCAATTTTGAAAAATTTTCTCAGTCCAAACTCTTCAGGATCAAAGGTAGCTGCTATATGTATGCTTATTGTTGCTAGTTCCTTTTCATTAACTTCTTCGATGTAAAAGTTCATACTTGCATTTATAACACAGGTCCCATCTCGTAGGAAAGCATCGAACCTTGCAAAGAGAGTAAGCTTTGTATCGCCAAATGTTTTAGCGTCAATGCAACTTCCATTCTCGCCCTTCTTATTGCCTTAAAATTTCCAGGTCATTGCATGTCTTGATGTTCGGTCAAATGATAGTGGGGATCTTGTGGTAACAAAAGGTGACCAGTATGATGTAAGAGACCATAGTAGTAGCAAAGAGGTACCAAGCTCTATTCATTTCCCCTAAGAATTGTTCAACTTTTTACACTTAAGGGTTAGATCTAAGTTCGTGATCTTGAGTAGTTTGTGGTACTTTAGGGATAATTCATCTCCCAAGAATCTGATGAGCCAATGTAATAGTTTTATATTATAAATGCTTGGTATGACTGACTAGTTGTGTAGAAACATTATTTGCCTGGTGCTTGAATATCTTTGCGTTCTATATCTGTAGGTAAGAAACCTCGGGAAGCCAGTGGATTTAGCAAGCCAGTACTACATAGATGGTGCTGATGAGGTATTTCTCTACATAATGCTTTATTGTTTTCTGTATGTGAAATTATGATCTGATGTTGTGAAAAAAATTCTCCTTTAGGTTAGCTTCTTGAATATAACTGGTTTCCGTGACTTTCCGTTGGGAGATTTGCCAATGCTAGAGGTTTGTTCAAGACCTAAAACCTCCAAATGTTTTCATCATTTCCCTTATCCAGCGAGGTGACATGTTGATATTTATTTCTAGGTATTACGTTGTGCATCTGAGAAAGTATTTGTGCCACTTACAGTTGGTGGAGGTATAAGAGACTTCACAGATGCAAATGGGAGGTCAGTTCCATTTATGTTCATGAGTACCATGGATCGAAATGTTTTTCTGCCAAGCAATCCCTTCTCTTACTGACTTGATGAGATAGTTTTTTCTGCAAATGATTCCCAAAGTACCTTTTCCTTCTCTAGGCAGACTTTTTTTTTTTGTATTCGATCTTTCTTAGGAATTAAGATAGCCTGTTATTTTATTTCTTTTTCGTTTTTTTCCCTGCAACTCTGCATATTTATGTTCTGATGTTCAATCTTACAACCTTAAGTGCCTCTCCCCCATCTTTTTGAGGTGTTATTTGTTGTTTGTCAATAGTCAATACTGAGAAGGAAAAGGACAGACAGAGTAATTATGTATTCTTCCCTTGTCAGATACTACTCAAGTTTGGAAGTAGCGTCAGAGTACTTCAGGTCTGGTGCTGACAAGATTTCAATTGGTAGTGATGCCGTTTTTGCTGCTGAAGCCTATTTGCAGACTGGTGTATGTATTTTATTTTTCCATACAATCTTCATCTATTTCCCAATTATACAGTTATTTTTGTGTATCAGGTAAAGACAGGAAAAAGCAGCTTGGAGCAAATCTCTAGAGTATATGGCAACCAGGTTTTCCACGAGAAATCCAGTTACAATTTGTTTATTACCGTATACAACCAAAACATTATTTTTAGTATTCATGTTAGCAGCTAATCTTCATAATATATGGAAAACATTCCTCCTTTTTTTCTTCCTAAAAAATATCACAAAAAAGTTTTTGTTCTTCCATCCATGTGCCACTAATTTCAGAGGTGTATCCATTGTTGGGAACTCTGCTATTTATATTGAATTGGTGACTGATAAGTTTTTTGAATAAAAACATATAATGTATCTTCTGCATTTGCTCAAGATACTTGGTGTGATTACTTATGTTCAACCTTGTTATATAGCATTCACCTTAGTCATTGGTATACCATATATCTATTCATGTCCTACTATTATAGTTATTAACCTGTCAATCACTAATTGCAGTGATGATATTTCTCTTATTAGGCAGTTGTTGTAAGTATTGACCCTCGAAGAGTATATGTCAAGAATCCGGAAGAGGTGCAATTCAAAACTGTAAAGGTGTCCAATAAAGGTGCAATTCAACCACTCATCCTGAATCTCCATTTGCATTTCAAGCATTAAGATCTCATGTACTTTTTTCAGGTCCATTAGGAGAAGAATATGCATGGTACCAGTGCACAGTAAGCCATTTGTTTTCCATTTACTGCTAATTTCGCGTTACTCTCTTATCCATGCACATAAGGGGTATCTTTGTATATTCATATGAAAAGTTTTTCCCAGTATGCAGGAATATTATTACCCAAAACGCCCATACCAAATTTCAGACTGATTAAAACATGTGCTTTCTTCAGATATTTGGTGTACTACCTTTTAGGCAACATTAAATGACTTTATGCTGGCATAATCTACTGTGGCATGCTGTCCTTTAATAAGATTGCTCTTTTGTTCCAACAAGTGTTGTTTATGTCTTTTCCAGGTAAGTGGTGGGCGTGACAGCCGTCCTATAGGAGCATATGAACTAGCCAAAGCAGTTGAAGAATTGGGTGCTGGAGAAATACTTCTTAATTGCATTGATTGTGATGGTATGTTCATGGTTTTGAACAGTTCAATATTATGCTTTGCCTGATTTTTATTTACGCAATATTTGTAGATTTTCTGCTAAGTAATAGCAAAGTGGAACCCACTAACAATAACCAGAACATTCTAGTTATGTTTTTCTTTCAAGAATCCAAGTTTTCCTTTGAGGCGTACAATCACAGTAAACTTTGTCGTCATTAATAGACCAGTGGTAATCACACATGCATTATTGACTATTGGTAGCAGTTTGACCATGTATGTAACACCTTAAAAGTTTCGGTTAGGGTGGTTTTTGCCAGTTGACTTTAATTTTCACTGTCTCCATTACTCATGTTAAGAGGTACTCCCTCCATCCCATAATATAAGGCATGGTCAAACTTGGCACAGTCTTCAAAACTAATTTTTGACTTATAATTTATCATATACTATAACATTTATTGCAGCAACATTATAACCATCTTAAAGTAAATTTAAATGTCAATCCAATGATATTAATTTTAACAAATAAAATTTAATTTATATTATAATAATTGTTGGTCAAATGTTTTTAAAGTTGAATCTTAGAATATGTGCACGTCTTATATTATGGGATAGAGGGAGTATAAAAAACAGGTGAATAAAGACAAGACGAATGCCAATATGCCATGATGTTGTTTTATTTTTCAGGCCAGGGCTGCGGATTTGACATAGATCTGGTAAAAATGGTGTCAGATGCTGTGACTATCCCTGTCATTGCAAGCAGTGGTGCTGGTACTGTCGAACATTTTTCTGAGGTCTTTGAGAAAACAAATGCTTCTGCTGCCCTTGCTGCTGGCATTTTCCATCGGAAAGAGGTATTGTCCCGCCTTGTACTTTTTATTCAGCATGCTATGCCTGGAGCTCTACATGATAATCCTTTATTCCTTTTCTTGCAAGTTCTGGAAAACTTTGACCTAGCTTACGTTATTTGCATTTGCTCAGCAGTGTTAGTCTGTTCTATATGATCAACAGAGCTACGTGCTCAGTTAATAATACTTGCCCACGTTATGTTAGAATCTTTGTTCACGTTCCATAGTACCTGTATAGTAAGATTATTTAGGGTTGTTGGACGTAACTGAGCGCTTCTGCTTTATCACAGGTTCCGATTTCAGCAGTGAAAGAGCATCTGGTAGATGCTGGCGTGGAGGTCAGAGTGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA011080