BGIOSGA011098

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Revision as of 09:26, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA011098| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA011098, complete gene.| tag = OS03G02...")
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Gene Name

BGIOSGA011098

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA011098, complete gene.

LocusTag

OS03G0252800

Ensembl Transcript ID

BGIOSGA011098-TA

Ensembl Protein ID

BGIOSGA011098-PA

Length

3978

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:8602845..8606822

Sequence Coding Region

8606711..8606822,8606535..8606629),complement(8606335..8606426,8605252..8605345),complement(8605106..8605178
,8604888..8605020),complement(8604303..8604477,8604018..8604158),complement(8603747..8603842
,8603519..8603660),complement(8603107..8603234,8602845..8603021

Genome Context

<gbrowseImage1> name=IndicaChromosome03:8602845..8606822 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:8602845..8606822 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGACATGGCATTGCCAATAGTGAATGCCACCGCAGCGGTGCTTGCTCGTGTCTCAGCTGCATTCAATGCCCCTTTTGCCCGCGCAGTTGTCTTTGGGGTTCATATCGATGGGCACCTGGTTGTTGAAGGGCTCCTTATAGCGGTCATAGTGTTTCAGCTTTCTAGGAAGAGCTACAAACCGCCCAAGAAGCCACTCAGTGAAAAGGAGATTGACGAGCTATGTGATGAATGGGAGCCAGAACCTCTGTGTCCTCCGATCAAGGATGGGGCCCGAATTGACACACCAATGTTGGAAAGTGCTGCTGCTCCACATACAACCATTGATGGGAAAGAAGTTATAAACTTTGCATCAGCAAATTATCTTGGTTTGATTGGCAATGAGAAGATTATTGATTCTTGTGTTGGTTCACTGGAGAAATATGGTGTTGGTTCTTGTGGTCCACGTGGCTTTTATGGAACGATTGATGTCCACCTTGACTGTGAGGCAAAAATAGCGAAGTTTCTTGGAACTCCAGACTCAATTCTGTATTCATATGGGATTTCTACAATATTTAGTGTGATACCTGCCTTTTGTAAGAAAGGAGACATCATAGTTGCTGATGAAGGTGTGCACTGGGCAGTGCAAAATGGTCTTCATCTGTCAAGAAGCACTGTTGTTTATTTTAAACACAATGATATGGCTTCACTTGCAAACACTTTGGAAAAACTTACACGTGGAAATAAACGAGCAGAAAAGATCAGACGATACATTGTTGTAGAATCTATCTACCAGAATTCTGGTCAAATTGCTCCCTTGGATGAGATTGTCAGATTGAAGGAGAAATATCGATTCCGTGTTATTCTGGAGGAAAGCCATTCTTTTGGTGTGCTTGGCCAGTCTGGACGAGGCCTTGCTGAACATTATGGAGTTCCAATTGACAAAATTGATATTATCACTGCTGGAATGGGGAATGCATTAGCTACTGATGGTGGCTTTTGTACAGGAAGTGTTAGAGTTGTTGATCATCAGCGTCTAAGCAGTTCTGGCTATGTTTTCTCGGCTTCTCTGCCACCTTATCTTGCCAGCGCTGCGGTTTCTGCTGTCAGCTACCTGGAGGGGAACCCGTCAGTTCTTGCAGACCTGAGGAGCAACATTTCTTTCCTGCATAAAGAACTGTCAGGTACTCCAGGACTTGAAATTTCCAGCCATGTTCTGTCACCTATCGTTTTCCTCAAACTGAAGAAATCGACGGGTTCATCAAACACCGATATAGATCTTCTTGAAACTATTGCTGAGAGGGTATTGAAGGAAGATTCAGTTTTTATCGTGGCGTCAAAGCGGTCACCTTTGGATAGGTGCAAACTTCCCGTCGGAATACGCCTCTTCATGTCAGCCGGCCACACCGATTCAGACATCTCCAAAGTGTCCTCATCCTTGAAGCGGGTCTCAGCATCAGTTCTGTCAGATTACATCTGA</cdnaseq>

Protein Sequence

<aaseq>MDMALPIVNATAAVLARVSAAFNAPFARAVVFGVHIDGHLVVEGLLIAVIVFQLSRKSYKPPKKPLSEKEIDELCDEWEPEPLCPPIKDGARIDTPMLESAAAPHTTIDGKEVINFASANYLGLIGNEKIIDSCVGSLEKYGVGSCGPRGFYGTIDVHLDCEAKIAKFLGTPDSILYSYGISTIFSVIPAFCKKGDIIVADEGVHWAVQNGLHLSRSTVVYFKHNDMASLANTLEKLTRGNKRAEKIRRYIVVESIYQNSGQIAPLDEIVRLKEKYRFRVILEESHSFGVLGQSGRGLAEHYGVPIDKIDIITAGMGNALATDGGFCTGSVRVVDHQRLSSSGYVFSASLPPYLASAAVSAVSYLEGNPSVLADLRSNISFLHKELSGTPGLEISSHVLSPIVFLKLKKSTGSSNTDIDLLETIAERVLKEDSVFIVASKRSPLDRCKLPVGIRLFMSAGHTDSDISKVSSSLKRVSASVLSDYI</aaseq>

Gene Sequence

<dnaseqindica>1..112#194..288#397..488#1478..1571#1645..1717#1803..1935#2346..2520#2665..2805#2981..3076#3163..3304#3589..3716#3802..3978#ATGGACATGGCATTGCCAATAGTGAATGCCACCGCAGCGGTGCTTGCTCGTGTCTCAGCTGCATTCAATGCCCCTTTTGCCCGCGCAGTTGTCTTTGGGGTTCATATCGATGGTAAGCCTCTTACGTCCACATCAATGAGGAACTTGTGATGTGATAAGGGCGATCGACATTCGGTAACATTCCATTTTTCAGGGCACCTGGTTGTTGAAGGGCTCCTTATAGCGGTCATAGTGTTTCAGCTTTCTAGGAAGAGCTACAAACCGCCCAAGAAGCCACTCAGTGAAAAGGTAAGTTATTTTCTGCCTGTTCCTCGCTGTTACTTTGTGTTAGAGTATTGGTTTTGGTCATTGCTTTCCAGAACTTGTTGGTGAAAGTTAGCATTTTGATCTTTGCAGGAGATTGACGAGCTATGTGATGAATGGGAGCCAGAACCTCTGTGTCCTCCGATCAAGGATGGGGCCCGAATTGACACACCAATGTTGGAAAGGTTTGTATGATGGTTACATTCTAATTAAAGTTTAAACGGTAGTTGATGCACCATATGGGAGTTCTTTTTTCTTACTTTAAGGAAGTTTTTATGTTTGATAGTGTCTGTTCTGAAGGTAGTTTCTTAAATCTCCTTGCAGGAAATAATTCGTTTTCAGTATTGCTCTATATTATTTCATAAGTAGTGAGTTACTAGATAAACTATGAGAGAAAGCATGACAGGATTGGGGCAGTTGTAAGCTCAAGCATTGGTTAACTTAACTAGGCAGTGCAGCATGTGGGAAGGCAATATTGACTTGAACCTTTATTCTTGACAAATACTGCATGCAAAAGGATGATTTGCATGCCACAAATCTGGTCAAATTTTAGACGAATACAGGGCATCATGAATCACTTGAAGTATCATGTATCCCTTGCTTTCCAAATGCTTACAATCTTCTATTCTTTAGGCAGACTAACTTTTCTTGAAGTTATTATAGTTGATTCGCAATCGCCATCTGCTTTCTGTAACTTGCAGTATCTTCTCAAACATTTTTCCTCTTCTTTTTACGACGTTAATAAGAACATCAAATGACTTAATACATGCTGCCAAATGCATCTTGCTAGTATTTTGTTATAAAAGTTGTCCTCCATCTGTTATAATCTTGTATCTTTATCCAGTTATCAACAATACTCCATTTATGTGCTTGCGTTGCACTAATAATGGACAGCAGCTTTCTGAATAATACAAATTTAGGAGTAACTTCCAGCATCCCTAACATAGCGTGGCCAATCTCAAATAACTCTCACTCATAGAATATTCATTTTGTTGCCCTTCCCTCAGATATTGCAATGCATGATATATCATCTGTTTGATGAGTCCTTGTTTATGGATGTGTAATGCTGGAATTGAGAATGTTTATGTTTGCAGAATACCTGCAATTCTTGGGCATTGCATGTTTTTTCTCCTGAGTTTTGGGGGTCTTAACACTATTACGTTTCTTGCTACAGTGCTGCTGCTCCACATACAACCATTGATGGGAAAGAAGTTATAAACTTTGCATCAGCAAATTATCTTGGTTTGATTGGCAATGAGAAGATTATTGTAAGCCAAAACTCTATTATTTAGGAGTTATTTTGACACTTCTTCCAGGATATTTGACATGGGTGAATTGCAGGATTCTTGTGTTGGTTCACTGGAGAAATATGGTGTTGGTTCTTGTGGTCCACGTGGCTTTTATGGAACGATTGGTTTGTATACTCTCTTTTTGCCACCACTGATCTGTATTGCAAATATGGAAGAGAAACTTATCTTTTCATTGTGGAACACTTGCAGATGTCCACCTTGACTGTGAGGCAAAAATAGCGAAGTTTCTTGGAACTCCAGACTCAATTCTGTATTCATATGGGATTTCTACAATATTTAGTGTGATACCTGCCTTTTGTAAGAAAGGAGACATCATAGTTGCGTAAGTTAACCTTTTGCCCACATAGTAATATGAACAATACCGGCACATATAGAGTTTGTCCTCTCTTTTTTTTTCAGTACAACAGCTTATATAAATGTTTTAGTTATTCACATTTTTTATATACCTGCCTTTTGTAAGAAAGAAATCAAATGAAAACTGCTTCCTTGCCCCCCCCCTCCCCCCCAACCAAAAAAAAAGAGTGAAAATCCTGCACAAACCCTTTAGAAAGTAGTGTATATGTCTGCCTTGTGATCTTCAAAGTTGTCACCTCTTACATGTATCTATTCTTTAGTTGTTATTCTTCCTCATGCAATTAGCTCCATACCTGGATAGTTCTTTTACTAGGTAGCACTTTTCTTTTCTTGATTTTTCATGTTTGAACCTAAGCAAGTTTTCTATATGCATTGCAGTGATGAAGGTGTGCACTGGGCAGTGCAAAATGGTCTTCATCTGTCAAGAAGCACTGTTGTTTATTTTAAACACAATGATATGGCTTCACTTGCAAACACTTTGGAAAAACTTACACGTGGAAATAAACGAGCAGAAAAGATCAGACGATACATTGTTGTAGAATCTATCTACCAGGTGTGGTGCCTTTTATGATAACTCTGATTGGACATGAGTATGGTTTTTTCTCATTTTTCTCATGAATTTTTACGACCTAGAAAATCATGAAATCGTTTAAACATATGACTTTGGATATATCCTCTCTTACTGTGACGATTGCAGAATTCTGGTCAAATTGCTCCCTTGGATGAGATTGTCAGATTGAAGGAGAAATATCGATTCCGTGTTATTCTGGAGGAAAGCCATTCTTTTGGTGTGCTTGGCCAGTCTGGACGAGGCCTTGCTGAACATTATGGAGTTCCAGTGAGTACCCCTGACATTTTTGTTCTCTCATCGCACCAAAGTAGAAGATTAAAAAGAATAGGTATAATCCATGGAGTCCTGGTAGACACCTGTTAATTTATGAAAATTGTGTTACTGACCATTTTAATTGGATATATTGGCACATCTTATTTCTTACATTTTCTTGCATGTGCAGATTGACAAAATTGATATTATCACTGCTGGAATGGGGAATGCATTAGCTACTGATGGTGGCTTTTGTACAGGAAGTGTTAGAGTTGTTGATCATCAGGTAATGCAACTCTAGATTGACGGAAAATCAATTGCAATAGAATGTTGTTAAATATCTTGACCTATTAAGTTATTGTGCTTTTGCAGCGTCTAAGCAGTTCTGGCTATGTTTTCTCGGCTTCTCTGCCACCTTATCTTGCCAGCGCTGCGGTTTCTGCTGTCAGCTACCTGGAGGGGAACCCGTCAGTTCTTGCAGACCTGAGGAGCAACATTTCTTTCCTGCATAAAGGTTAAGAAGATTATCTTGTTATTTATATACTTATTTGACCAACATTTACTTACTTTTTAATGTGATTAATGTAGATGTAAAGTTTTTAATGCTTTAATACCTAGCATGTAATGTTGTGGCATCACTTTTATCATGTATTTTTCCCATTAGTGGTAGTTTCAAAACAGCTGCATTGAAATTGTGAAACACATTATGGGATTCAATAGTTGAATTTGTTCAGGCATAATATGTCGTTACTGGTGCCTGCTGATCACCTTGATGCCTTCGATGTTTTTTATCTGCAGAACTGTCAGGTACTCCAGGACTTGAAATTTCCAGCCATGTTCTGTCACCTATCGTTTTCCTCAAACTGAAGAAATCGACGGGTTCATCAAACACCGATATAGATCTTCTTGAAACTATTGCTGAGAGGGTAAGTCCATGTCGACACAACAGAACCTTTCCAGCTGCAAATGAACTTTCACTTGCATATATTTACAGCATCCTATTTCCAACAGGTATTGAAGGAAGATTCAGTTTTTATCGTGGCGTCAAAGCGGTCACCTTTGGATAGGTGCAAACTTCCCGTCGGAATACGCCTCTTCATGTCAGCCGGCCACACCGATTCAGACATCTCCAAAGTGTCCTCATCCTTGAAGCGGGTCTCAGCATCAGTTCTGTCAGATTACATCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA011098