BGIOSGA011113

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Revision as of 09:26, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA011113| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA011113, complete gene.| tag = OS03G02...")
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Gene Name

BGIOSGA011113

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA011113, complete gene.

LocusTag

OS03G0248000

Ensembl Transcript ID

BGIOSGA011113-TA

Ensembl Protein ID

BGIOSGA011113-PA

Length

6727

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:8372686..8379412

Sequence Coding Region

8378841..8379412,8378436..8378756),complement(8377551..8377773,8377169..8377348),complement(8376868..8377074
,8375886..8375963),complement(8375741..8375811,8375531..8375641),complement(8373235..8374141
,8372686..8372826

Genome Context

<gbrowseImage1> name=IndicaChromosome03:8372686..8379412 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:8372686..8379412 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTCCTTCCGTTCGAAGGACAGAAATGTGCAACCACGATTTAATTGGCCATGGAGAAGCGAATCACCATTATCAGCACAACTGCTCATTGATATTCCACCTGAAATAGAGTTATCGGACTACAGAAGGTTGCCAGGTTCAGGAAGCGAGAGCCCATCTGGACTTCTCCATGGTGAAGGCTTCAAGGACGAACCAATTGCTGACTTGGATATTTTCTTTGAAAGGCTTTATGAATATTTCTGTGCAAAAGGGCTACGATGCATTGTTACCAAATGGATAATTGAGATGCTTAACGTACTTTTTATGGTATGCTGTATTGGGTTCTTTTTCTTAATTGTTGATTGGAATGCCCTCGGCCATTTGAAATGTGGTGTAGAGGCACTCGAATCTGGGGAAAAACCATGTGATCTAATGCAAGTCGTTAAGCATAATCCATTAGTTCCATTCACATTTCCTAAAATGATCACTATTGGATCAATGGTTATATTGACAACTTACGGTCTTATCAACTTCCTCAAGTTTTTCGTGCAACTCAGAAGTACATTGAATATTCGTGACTTCTACTGTAACAGTCTGAAAATTACAGATCTTGAGATCCAAACCATCTCATGGCCCAAAATAATTGAGAAGGTTGTCCTGCTACAGAAATCTCAGAAACTTTGTGTTGTAAGGGACCTCTCGGAGCATGATATTATCATGAGAATAATGAGGAAAGAAAATTACTTGATTGGGATGGTCAATAAAGGCATTATCTCATTTCCAATTCGTCCTTGGGTACCTGGAGCTGGACCAACTGTCAAATCCCATTTGCAAAACAGGAGAAACCATCTGATACTCCCGAAAGCCCTAGAATGGACATTAAATTGGTGCATCTTCCAAAGTATGTTTGATAGTAAATTCTGTGTTCGGAAAGATTTTCTAACAAGCCCAGCTGTGTTAAAGAAGCGACTTGTATTTGTGGGCATTTCAATGCTTATCCTTTCACCCTGCCTTGTAATATTCCCATTAGTGTACCTCATTCTGAGACATGCTGAAGAAATTTATAATCACCCCAGTACAGCTTCATCTAGAAGATGGTCAAACTTATCAAGGTGGATTTTTAGAGAGTATAATGAGGTAGATCATTTCTTCAGACATAGGATGAACAACAGCGCTGTGCACTCTTTAAATTACCTGAAGCAATTTCCAACTCCACTGATTTCTATAATGGCAAAATTCATATCTTTTGTTTCTGGTGGTTTGGCTGGTGCTCTTATAATCATTGGATTTCTGGGTGAATCTGTTCTTGAGGGCCATATCTTTGGAAGAAATCTATTCTGGTATACTATTGTTTTTGGAACAATAGCTGCCATAAGTCGAAAAGTAGTGGCTGATGAACTTCAAGTAATTGACCCAGAAGGCGCTATGTGCAATGTTGTCCAACAAACGCATTATATGCCTAAGAGGTGGCGTGGTAAAGAGGACAGTGAAGTGGTGCGAAGAGAATTCGAAACACTATTTCAGTTTACCATAGTAATGCTGCTTGAAGAGATGGCCTCCATTTTCATCTCTCCTTACTTGCTCATCTTTGAGGTACCAAAGCGTGTTGATGATATTCTGCAATTCATCTCAGACTTCACGATTTATGTAGATGGGGTGGGAGATGTGTGCAGCCTAAGCTTGTTTGACTTCAGAAGACATGGAAATAGAAACTATGCTTCACCATTTGATGCACTTAAAACGCTTAGGAGCTCCCAAGGGAAAATGGAGAAATCATTTTTAAGTTTTCAAAGTGTGTATCCATCATGGGAACCAAATGCAGAAGGCAAACAATTCTTAACTAACCTCCAAAAGTTCAAGGAAAAGCAAATACGGCAGCAGGCTCTTGCACAATATCAAGCAATGGAAGCATCAGGCTTTGTGGCAAGCACCAGAGGTCACAGGGATGATATCTTCCACCAACTACTCCCTAGTGATATCCATAACCGTGCTGAGGCCGTCTCACCTGCTGTTTACAATTTGGGCCCGTTAGGATTGCTTGACACAGATCAAAGAAGTCATCCATATATTCTGGATTGGTACTACGTCTGCCATCCACCTCACTTGGATAGAACCGAGGCTCCTTATTTCAACGAAGTGTTCCCTGAGACCAGTGAGAACACAGGTTCAGCAGCATTTAAAGCATCTGAAATTGAAGAAGCAAGGGGCTGGGACTCTGATACGGTTCCCCCGCCTCGAGCAGATCGCGATGAGTGGAACTTTAACCATGAAAGGGTTCGAAGCCATATGGATGCATCGACATCAAGCAATTTGTTTCATCATGCTCCAGTAGAACACCGTGATACCAAAGGAAATATTATCGATTGGTGGGATCAAGCACCTGAACATTCTACTGGTCAACAAGGAAGTTTTCTGGAGCCTCCGGAATTTGGAAATCGATATGTTGCTGGTAACCGTTCCAGTTATCACTCTGGTGATGTGTCTGATGGAAGTGTGGAAGAGCTTGAGCGAAGCTATAACAGAAGTAGCAGCAGCTGGAGAAGACCTCAAGATTTGTCCACTACAAGGTATATGGACGACTCTGACATTGAGGAAGGGTTGAATCTTCCTTTTGCTGATCTCCCGCAGAAGGATGAAGATGCTCGACATGGCACATCTGATACTAATGACCCCACGCCAGTCGGCCTTCCTGAGTACAGCATAAAGCAATCAGGACATGCAGTTGATCCAGTGATTGATCAGCAACCCAAGCTGTATGAAGGAATCCGATGCTGGGGGCCATTACCTTGGTCGTCCAGACGGGCAAGGGTCGAGGCAGAGGGAAGCGTCTAG</cdnaseq>

Protein Sequence

<aaseq>MSFRSKDRNVQPRFNWPWRSESPLSAQLLIDIPPEIELSDYRRLPGSGSESPSGLLHGEGFKDEPIADLDIFFERLYEYFCAKGLRCIVTKWIIEMLNVLFMVCCIGFFFLIVDWNALGHLKCGVEALESGEKPCDLMQVVKHNPLVPFTFPKMITIGSMVILTTYGLINFLKFFVQLRSTLNIRDFYCNSLKITDLEIQTISWPKIIEKVVLLQKSQKLCVVRDLSEHDIIMRIMRKENYLIGMVNKGIISFPIRPWVPGAGPTVKSHLQNRRNHLILPKALEWTLNWCIFQSMFDSKFCVRKDFLTSPAVLKKRLVFVGISMLILSPCLVIFPLVYLILRHAEEIYNHPSTASSRRWSNLSRWIFREYNEVDHFFRHRMNNSAVHSLNYLKQFPTPLISIMAKFISFVSGGLAGALIIIGFLGESVLEGHIFGRNLFWYTIVFGTIAAISRKVVADELQVIDPEGAMCNVVQQTHYMPKRWRGKEDSEVVRREFETLFQFTIVMLLEEMASIFISPYLLIFEVPKRVDDILQFISDFTIYVDGVGDVCSLSLFDFRRHGNRNYASPFDALKTLRSSQGKMEKSFLSFQSVYPSWEPNAEGKQFLTNLQKFKEKQIRQQALAQYQAMEASGFVASTRGHRDDIFHQLLPSDIHNRAEAVSPAVYNLGPLGLLDTDQRSHPYILDWYYVCHPPHLDRTEAPYFNEVFPETSENTGSAAFKASEIEEARGWDSDTVPPPRADRDEWNFNHERVRSHMDASTSSNLFHHAPVEHRDTKGNIIDWWDQAPEHSTGQQGSFLEPPEFGNRYVAGNRSSYHSGDVSDGSVEELERSYNRSSSSWRRPQDLSTTRYMDDSDIEEGLNLPFADLPQKDEDARHGTSDTNDPTPVGLPEYSIKQSGHAVDPVIDQQPKLYEGIRCWGPLPWSSRRARVEAEGSV</aaseq>

Gene Sequence

<dnaseqindica>1..572#657..977#1640..1862#2065..2244#2339..2545#3450..3527#3602..3672#3772..3882#5272..6178#6587..6727#ATGTCCTTCCGTTCGAAGGACAGAAATGTGCAACCACGATTTAATTGGCCATGGAGAAGCGAATCACCATTATCAGCACAACTGCTCATTGATATTCCACCTGAAATAGAGTTATCGGACTACAGAAGGTTGCCAGGTTCAGGAAGCGAGAGCCCATCTGGACTTCTCCATGGTGAAGGCTTCAAGGACGAACCAATTGCTGACTTGGATATTTTCTTTGAAAGGCTTTATGAATATTTCTGTGCAAAAGGGCTACGATGCATTGTTACCAAATGGATAATTGAGATGCTTAACGTACTTTTTATGGTATGCTGTATTGGGTTCTTTTTCTTAATTGTTGATTGGAATGCCCTCGGCCATTTGAAATGTGGTGTAGAGGCACTCGAATCTGGGGAAAAACCATGTGATCTAATGCAAGTCGTTAAGCATAATCCATTAGTTCCATTCACATTTCCTAAAATGATCACTATTGGATCAATGGTTATATTGACAACTTACGGTCTTATCAACTTCCTCAAGTTTTTCGTGCAACTCAGAAGTACATTGAATATTCGTGACTTCTACTGTAACAGGTAACATTTCTGATTAATATGTGTGTTTATAGCTCAGTGCAATCATCAATGACTGAATCCACCTTCTCTTTTCTTTTTGTGTAGTCTGAAAATTACAGATCTTGAGATCCAAACCATCTCATGGCCCAAAATAATTGAGAAGGTTGTCCTGCTACAGAAATCTCAGAAACTTTGTGTTGTAAGGGACCTCTCGGAGCATGATATTATCATGAGAATAATGAGGAAAGAAAATTACTTGATTGGGATGGTCAATAAAGGCATTATCTCATTTCCAATTCGTCCTTGGGTACCTGGAGCTGGACCAACTGTCAAATCCCATTTGCAAAACAGGAGAAACCATCTGATACTCCCGAAAGCCCTAGAATGGACATTAAATTGGTGCATCTTCCAAAGTATGTTTGATAGGTAAGGAAGTCTGTAGCTCTGTTACTTTTAACTAGCTAACATTGGATTATTTGGCCAAAGTATTTTGATAACATTTGTTTGGCAAATACTCTGCTGTCAACATAATGAATCTAGGTATCTTTTTCTTCCACATTAATCCTGCGTTTGGGAGAAAGCGGGTGAAGACACCCTTAAGTTTTCATGTAATAACACTTAATTGCACAAGAGAGTGCAAATGTCCCTACCAATCTTTATCATTCTCTTTTGTTATACATTATGTTCAACCTCTGTGGAATACAGAATTGTTGATGTTATGCATAATTGTCTCTAGCTAGCTGGTTACTAAATTCTAAATATCTTAACTCAAGCTTTACTGCTTTACTGATTTTCTGATGACTTCATAGAGATATCGAGTAATTTAGATATTCAATCTGTGTAAAAGCTGGATGCTTTTCTTCACCCCCATCTATTCCCATCAAACAGCTCTTATGTGGATTTTGCACAATAGCACCTAAAGACGTATTTGTGCTAAGATACCCTCCCAGCTTCCAGTTTGTACAACATCCGCTGAAACCTTCTAGCAAGAGCTCGCACATCGCATTGGGATGTTCCACGATTTTTTTTTTGTGTGTAGTTTTAACCTCTAAAACTATACTGAAAGCCAATATCATTTTCTTCTGCAGTAAATTCTGTGTTCGGAAAGATTTTCTAACAAGCCCAGCTGTGTTAAAGAAGCGACTTGTATTTGTGGGCATTTCAATGCTTATCCTTTCACCCTGCCTTGTAATATTCCCATTAGTGTACCTCATTCTGAGACATGCTGAAGAAATTTATAATCACCCCAGTACAGCTTCATCTAGAAGATGGTCAAACTTATCAAGGTGGATTTTTAGAGAGTATAATGAGGTACCTTCTTTTGCAGAGATATTATTACTATTATGATGCAGTCATTGTCCTGTCCAGTATTTCTTCTAAATGCCTGCCATGTGCTTACTGTATTATATTAACTGCAAGCTCTGCCATTTGTTGAGGCCTATAGATACTATCATGCTATGCAATCAGCCTTGTTTTTCTTCGTCTAAAGCTCAGTTGCTTACAATAATTTCAGGTAGATCATTTCTTCAGACATAGGATGAACAACAGCGCTGTGCACTCTTTAAATTACCTGAAGCAATTTCCAACTCCACTGATTTCTATAATGGCAAAATTCATATCTTTTGTTTCTGGTGGTTTGGCTGGTGCTCTTATAATCATTGGATTTCTGGGTGAATCTGTTCTTGAGGGCCATGTAAGTTATTTCTTCCACTTTTTCTCATTTGCTATTACACATTTACACGTCTTATTGACCTACTAAATCTCACATACATTCATATCTTCTGAAGATCTTTGGAAGAAATCTATTCTGGTATACTATTGTTTTTGGAACAATAGCTGCCATAAGTCGAAAAGTAGTGGCTGATGAACTTCAAGTAATTGACCCAGAAGGCGCTATGTGCAATGTTGTCCAACAAACGCATTATATGCCTAAGAGGTGGCGTGGTAAAGAGGACAGTGAAGTGGTGCGAAGAGAATTCGAAACACTATTTCAGGTATTTTATCAGTTCGAGAGAATTTTGCATATACCATATATAATCAATTAGATATTTAGTGTTCTGTATACTGTACTACTTGGCTTTGGAACTTCAACCATCACCATCATCAAATTTTCTAGTTATTTGTGATTCTGCTCTTTATTTTTTTGTCATTGAAAGAACTGCGCAAATGCTCTGGGCTGATGTCCACATAATCTTATTTGAACAAAATTGTACAAATGCAAGGTGCGCACACAAAAGTACACGAAAAAAAGGTGGTTTGGCAAAGAGTTGACTGAGAGAATTGTGCAATGTGCATATACCGTACTGAATCAACTAATCAACATACTTACTTGTCCTATATGCTGTACAATTTGGCTTTGGAATGTCACCAATCACTATCATTCATTTTGTCAGCACTCATCGTCTTTCTTTATTGAGAGAACTATGAAAGGTTGTATGTTGATCTCAACAGAATGTTATTCAACAAAATTGTACAAGTGCAATGCCCACCTTAGAGAAGTACATGAAAAAGTGATGGCCCAACTAAGTTACATCGGAGTAACGCTGACAATCGTAAACTCATTTGATATTAAAGTTGTTCGTGGCCACTGGGTGATTCAGCAGTTGCATTTTTAAATGAGTCTCACTTGCTTATTTTGCTAGGTGAATCTGGAAATAATAGTGTTCAAATTCTCTGATAGAACTAATGACAAAGCTTGGCATTTTCTAGTTGTTTTATATTGCTTTCAGTTAAAGCGCTATATCTGAAGATGAAAAGAAAATGAGTTTCTCTTTGTTTAAGTGCTTTGCAGTCTAGATATCAGTACCTTACATTTGTATCTTGGTTGATTTACGTTTAATACTCTATTGTCCATATCATATTGCTCTGAATTTTAACTAAGTAATTTTACAAATGCAGTTTACCATAGTAATGCTGCTTGAAGAGATGGCCTCCATTTTCATCTCTCCTTACTTGCTCATCTTTGAGGTACCAAAGGTAATGTTCTGAACTTGCTCAACAACAGTGTTTTTTCTAAAGTTCTTTGACAGTGAACTCCTATTATGATACAGCGTGTTGATGATATTCTGCAATTCATCTCAGACTTCACGATTTATGTAGATGGGGTGGGAGATGTGTGCAGGTTCTCTCTTGATGTTTCTTAAGAAATGAATTTTGTTATCATATATTGCCACTGGGTTTTTAAAACATTTAACATCATTTATTCTCTGTGTTTCAATAGCCTAAGCTTGTTTGACTTCAGAAGACATGGAAATAGAAACTATGCTTCACCATTTGATGCACTTAAAACGCTTAGGAGCTCCCAAGGGAAAATGGAGAAATCATTTTTAAGGTACATTTAATTTCAAGTTTGAATTACTTCATGTGTTTCTTACTAGCTATTATATTGTACTCATATTGTTATTAAAAAGATATCTTAAGGGCCATCATTTGTTATTGAAATGGCTTTGGTGTACTTTAGTAGTTCTTGGCTCTGAGGTTGTACTGTGGTATGATTTGCACGCTATTGTTATTTCATACTCTTGTTCAAACTAGGGGGGTATTTTAGTTCTATGAGCATTTTACGAGGAAATGTGTTAGTTTGTCTATGTAGTTTGCCCATGTCAACAGCATAGTGCATATGGTCTAGACTGTACAAGTCAACATTAACTATGGATATATGATGAAAATATTTCTCAGAAAATCACAACAAATGTGTTTCCAGCATTTAATTGAATTTACCAGAGTATTATTTGAGTATACTGTTTTGTCCATAAATATGGCCAAAGCTGAACACTTGACCATGATACTTTTTTGGGTGTCTTCTTGTCAGCACTATAGACTCTGTAGAATATAGGCACTACGGTGCTGCCCTCGTCACATCATATTCCAAGAAAGTGACATCCAGTTTTGGTTTAGTACTTTAGTCCACCATGCACATTGCATTTTCAAGAGTGAATAACAGAATAAGCAAAGTAGTACTCCAAGTTTCACTTAAGGCTTAATTTGGTCCTTGACGTTTCAGTCCGTCCATATTAGACCATTAGTCCTTCATGTTTTCATTTTAGTTCAAACTCATCGTTGGACCCACTTGTGAAGACATATAGCTAAATCTAATTAGCATCTCTCTTGATAAATGACTATTATTCCCTAATTTCACATGTATAAGAAAAAGGAAAAGAAAAAGACAAATATGTCTTACTATTTGGCCAGTGAACCTGTTTCTCAAGACCCCTCCAATACCCAATGGTTGTGTGCTGTTTTTTTTTCTGTTGAAATTTGTGTACAATGAGTTCTCTTAGATAAGGGATATTTTGTAATAGAAATGTTGACTTATTATTGGCTAATCAAGTGGGTGCAAGTATGATTTCGAACCAAAACGAATACTTAGAGGACCTGTGTGGACAAAATAGAACTTAAAGGACCAAATTGAGCCTCTGGTGGAACTTTAGGGACTAGATTAGCTATCCACCCAACTTCCAACTGTATGCAATGTGCCCTGCTGTTGTCCTACAGGCCTAATGGATACTGGCCACTTTGTACTATGTATAGTTAGGAGGTTTTAGTTAGTCACAAGTGTTGCAGCCAAGGGTAGATCCAGGCGTAGGACACAACGCCCTTGTAATTGGTTGTTACCAATTGCAAAATTCGAAGATACAAATGGCCTAGCTTAATACAAGCTAGCTCAGCCCAAGGTTTAATGCTAATAATAGGTCTAATTCTATTATATGATTGTTTACAGTTTTCAAAGTGTGTATCCATCATGGGAACCAAATGCAGAAGGCAAACAATTCTTAACTAACCTCCAAAAGTTCAAGGAAAAGCAAATACGGCAGCAGGCTCTTGCACAATATCAAGCAATGGAAGCATCAGGCTTTGTGGCAAGCACCAGAGGTCACAGGGATGATATCTTCCACCAACTACTCCCTAGTGATATCCATAACCGTGCTGAGGCCGTCTCACCTGCTGTTTACAATTTGGGCCCGTTAGGATTGCTTGACACAGATCAAAGAAGTCATCCATATATTCTGGATTGGTACTACGTCTGCCATCCACCTCACTTGGATAGAACCGAGGCTCCTTATTTCAACGAAGTGTTCCCTGAGACCAGTGAGAACACAGGTTCAGCAGCATTTAAAGCATCTGAAATTGAAGAAGCAAGGGGCTGGGACTCTGATACGGTTCCCCCGCCTCGAGCAGATCGCGATGAGTGGAACTTTAACCATGAAAGGGTTCGAAGCCATATGGATGCATCGACATCAAGCAATTTGTTTCATCATGCTCCAGTAGAACACCGTGATACCAAAGGAAATATTATCGATTGGTGGGATCAAGCACCTGAACATTCTACTGGTCAACAAGGAAGTTTTCTGGAGCCTCCGGAATTTGGAAATCGATATGTTGCTGGTAACCGTTCCAGTTATCACTCTGGTGATGTGTCTGATGGAAGTGTGGAAGAGCTTGAGCGAAGCTATAACAGAAGTAGCAGCAGCTGGAGAAGACCTCAAGATTTGTCCACTACAAGGTATATGGACGACTCTGACATTGAGGAAGGGTTGAATCTTCCTTTTGCTGATCTCCCGCAGAAGGATGAAGATGCTCGACATGGCACATCTGATACTAATGACCCCACGCCAGTCGGCCTTCCTGTAAGAATAATTCCTAGAAGCAGTGACCCTGTTTAGACTGAAAAGCTCTCAGATACGTATGTTTGTGCATGGTTGTAAATATCTGTGTGAACCACGTCACAAACTTCACCAAAACTGGCAAACGCCGCAAATTCATTTGTACAGAACCACATATTACCTCACTGTATAGTCTTCTCCCTGCCCTCCTAGGGATTGTGGAGCAGGGGAAGAACCATTCTTTTGCAGCACGAAATGCATGGATCCAGTTGTTGCCTCGTTTCATTTTTTTTCCTGCACTATGTTAATCAATTTATGCAGTGATTAGCCATTGCCTCATTACAGACCTTGCAACCATGAAAGTACTGTCAACTTCAAGTACTATCGCTGTTCCTGTAGTAACTTGTACAGTTCTACCTGATGGCTCTACAGGAGTACAGCATAAAGCAATCAGGACATGCAGTTGATCCAGTGATTGATCAGCAACCCAAGCTGTATGAAGGAATCCGATGCTGGGGGCCATTACCTTGGTCGTCCAGACGGGCAAGGGTCGAGGCAGAGGGAAGCGTCTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA011113