BGIOSGA011154

From RiceWiki
Revision as of 09:27, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA011154| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA011154, complete gene.| tag = OsI_106...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA011154

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA011154, complete gene.

LocusTag

OsI_10672

Ensembl Transcript ID

BGIOSGA011154-TA

Ensembl Protein ID

BGIOSGA011154-PA

Length

5615

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:7704628..7710242

Sequence Coding Region

7709812..7710242,7705067..7705385),complement(7704628..7705011

Genome Context

<gbrowseImage1> name=IndicaChromosome03:7704628..7710242 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:7704628..7710242 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCAAATAACCTCGTACGCCATGCATCCCGACGGGCGCACCGTCTTCGTGTCCGCCACGAGTGGCAAGCACCACGGCACGTTCTCCTCCTCCCTCGACGACGACAACGAGTGGACGCGCCGCGGCGACTGGCTGCTGCCGTTCCATGGCCAGGGCCACTACGACGCCAAGCTGCGCGCATGGGTCGGCCTCCACTCGCCAGGGCACGTGTGCACCTGCGACGTCCCGTCCACCACCTTCAGTAGTGTGGCGGCGGCGACGTCGCAGCCGCCGGCGTGGCAGCTGGTGAACGCGGAGCACCTCTTCCAGGAGGATCATCCGGAGCGCGGCGGCACGTCGCTGGTGTCCACGGGCGACGCCGAGTTCTGCATCGTGGAGTCCGTGACGCCGAAATGGATGGATCCGGTGTGGGATCGCGACGAGATCGACAGGTGGTCTATAATCGCGTCGCAGCTCCCCGGCAGAACGGACAACGACATCAAAAACTACTGGAACACCAAGCTCAAGAAGAAGCTCCTCGGCTCGAGCGCCGTCGCCGCCGCCGCGCCGCCACGGATACAGCGTCATCAGCAGAGCCACCACCGGTCGTCTCTCCTCCTGCCGAACTCGCCGTCGCTCAATCCCGGCGGCGGCTACCCAGGCTTCTTCTCCGGCGCCGGCGGCTTCCATCCTCAGGAACCAGCTATGCCGTTAACCCTACCGATCGACACCCAGGAATTCATGCTGGGCACTCACTCTGGCCTTCCAATGCTGCTTGTGAAGGAGGAGATCAGCAGCAACATGATCGTGTTCGGCTCCGACCAGCAGAGCTGCAGCTCGTCAGATGGGCTGGCGGCGCCACACAGCCACAACCACCATGGCAACAGGGAGTTCATCCTTGATGGCTACAGCTATGGCGTCGGCTACGGCAGCAGCTGCATCGATCAGGTCGACAACGACAAGCTGTTCCAGCATCATCATCAGCAGGATCAGGCACAAGAACAGCAGCAGCAGCTGGTGTACAACTACGACGAGATCAAGCAGCTGCTGATGAACACATCAACCACAAGTAATAGTATTAATGCTGGTCAGGATCATGGCGGCAGCATGGAAGCAGGGTTGATCGGCTCACAAGGGAAGGTAACCATGATGTAA</cdnaseq>

Protein Sequence

<aaseq>MQITSYAMHPDGRTVFVSATSGKHHGTFSSSLDDDNEWTRRGDWLLPFHGQGHYDAKLRAWVGLHSPGHVCTCDVPSTTFSSVAAATSQPPAWQLVNAEHLFQEDHPERGGTSLVSTGDAEFCIVESVTPKWMDPVWDRDEIDRWSIIASQLPGRTDNDIKNYWNTKLKKKLLGSSAVAAAAPPRIQRHQQSHHRSSLLLPNSPSLNPGGGYPGFFSGAGGFHPQEPAMPLTLPIDTQEFMLGTHSGLPMLLVKEEISSNMIVFGSDQQSCSSSDGLAAPHSHNHHGNREFILDGYSYGVGYGSSCIDQVDNDKLFQHHHQQDQAQEQQQQLVYNYDEIKQLLMNTSTTSNSINAGQDHGGSMEAGLIGSQGKVTMM</aaseq>

Gene Sequence

<dnaseqindica>1..431#4858..5176#5232..5615#ATGCAAATAACCTCGTACGCCATGCATCCCGACGGGCGCACCGTCTTCGTGTCCGCCACGAGTGGCAAGCACCACGGCACGTTCTCCTCCTCCCTCGACGACGACAACGAGTGGACGCGCCGCGGCGACTGGCTGCTGCCGTTCCATGGCCAGGGCCACTACGACGCCAAGCTGCGCGCATGGGTCGGCCTCCACTCGCCAGGGCACGTGTGCACCTGCGACGTCCCGTCCACCACCTTCAGTAGTGTGGCGGCGGCGACGTCGCAGCCGCCGGCGTGGCAGCTGGTGAACGCGGAGCACCTCTTCCAGGAGGATCATCCGGAGCGCGGCGGCACGTCGCTGGTGTCCACGGGCGACGCCGAGTTCTGCATCGTGGAGTCCGTGACGCCGAAATGGATGGATCCGGTGTGGGATCGCGACGAGATCGACAGGTACGTGCTCCGTGCAGGGTTCACTTTCTCGCCGGTAACCGCGCCGCGGTTACCGGGCTTACCGTGGGGGGTCGGTAACGAAAACCGGCGGTAGGGTTTGGGCAAATTTTGCTCAAATTCAAAAATTTGAAAAATAATCGAAAAAAATCAAAAAAAATCATGGATGTAAAGCTTGTTTTGTATGTTGTTATGGTGAAAAAATTTCATCAAAAAGATGCAGGTAAATTCAAATTTGAGCGCAAAACCTATTGTGAATTATAAAAAAGAAAAAAGATTAAATGGAATGGGCCAAGTATGCACTGTTCACGAGGCCCAATAAGGCCCACAATGGGAGGAAAATATCTTTGGAAGCCTCTGCTTCGTTTCTCTGGCGAATCCTACCGTTTTTCCCCTCTCTCGCGTAGCTGCGCTCAGGACCGAAGGGGCGACGGCGTGCGCCCGCGCCAGATCCGCCCCCTCCGCGCCGGCGAGGCCGGTTCCCGCGCGGTAAGCGGCGGTAACCGCGCGGTACGCGACGGTAACCGTCTGGGTCGACGGGCAAGAGGTAATCCCTCCGTTTTGAAGGTTTTCGCGCGGTTAGGAGCGGTAACCGTGCGGTTTTGTACGGTTACCGTCGACTTCGTAATCTATGAGACGATATACGTATGTGCGGTAATCATGTGAAAACCGTGGTAACCGTCCACCCTACCGTGGTTACCGTGGCTTGAACCGTAGTATGGTATTTTTTACTGTGATATGCATGGACATATTAATAGAACATATTTTTACCAATATGCATGTGAAATACATTGGGAATATGAGTTTATTTCGGCATTTGGTTGCCCGTGCTTGGCTAAAACCATGCATGTGAAGTATATTTGATTGCTTTGGTCTATGTACATATAGGTTAAATTAAATACGTCATAGTATGGAAGAATTTGGATGCATGCTTACCAGTGTACATATAATTACGTCGTATTATTGCATAATGGGAGGTATGTTTATAATTAGCAGTGATAATTTCTCATGCATTTGATACAGGGTGGAGATGTCAGATAGTAGGGACCCTGTGTGGGAGCACGGGGAGAATATCCCACCTGGATGGCGTTGTAAGTATTGCCATACAAGAGGGGCGGTGGTGGGGCAACATGACTAAAGCACACTTAGCTGCAGAGGGAAGGGGGTTACATATTGCATTCAGTGCCTCCGGATGTCCGTGAGTTCTTCTGCCGTGAGTTGGACAGGATAAGATGCAGTGACCAGCGTAAGAGCGATAGCGGAAGAAGGGTTGAAGCAGCAAGGGTCAACTATTATGACCTAACAGTAGATGCCGACGAGGAGGAACAAATGGAAGCAGCCATTGCAGCCTCACGACAAGACGAAAACTTTAGGAGGGATGTTGAGGAGCGTGGTGGCACTTATGAGCATGTCGGTGGGAGTGGATCCGCTCAGCCGGAGGCACGAAAAGGTAGAAGTAACCCAATTACCAATATGCTACGAAGGGCTACGTCTCATAGGGAGTCACCTGCTGTGAGAGATTACAACCTAGCATCTGCCAAGGCCCCTATGCAGCCACGCATTGACATAGGATTCTTCACAAAGAAGGGGAAGCAAGCTAGGCAAGCCATTGGTGAGTCATGGGCAAGGTTCTTCTTTACCGCCGGCATTCCTGGTAGAAACGCCGATAATCCATACTTTGTGAGCGCCGTTCGGGAGACACAAAAGTGGGGTACGTATGCATCTATTAAGGAACTTCTTTTTTTCTAACTCATTGCGCACTACTTATTTCATACGTCAATTGTAGGTGAAAGTGTACCTTCTCCATCTGGTAACGAGATAGATGGAAAATATCTTGATTCTACAGAGAAGGATGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGAGATTACCGAAAGATAATGCACAACCCCAACCTCGAATACAACAACTCTAGCGCTGCTAGGTTGTACTAACATCTCTCCCAATAGTCGATCTATTGACAAGACAAGACAATCCTGATGAAAGTAGAGCATATATTTATAACATGTTTCAGTAGCTATAGCCTAGCTAGCCCAGGAAGAAAGGAACGGTGTACTGTACATTTTGGAATTAAAGAAATGGTCAAGCTTTACACACCACATAGGCTCACACCAATGCTTGCATTGGCACATGCATTCATCTGCACACACTGAGATTGGGTCTCTGAAATATGCAGCAAATCTGCTGCATTCAGCAGCTGCATCGATCTAGCACCTGCTCCAGTGGCTGCCTGCTTGCTCGTCTTGCTCATCGTGCTAGCTACTAGCTGCTTGCTGCTGCTTGCCTGCCCTCATATTTGGCCAGTTCCAGTCTGTAGCTTTCCTAGTACAAAGATGCATGTTATTTTTACACACGACAAATACACGAACCTGGCGAGCTATCGCTTTCAGTCCTCCACCTACATGTTGTTGAGCTAGAACTTGTCAATCTGTCATACGCGTGACCAAGGGTTAAATATTTGAGAAATCAAAAAATAAACATTTGGGGCACCTAAATTCCGAAATCGATCTCCTGATGAATAGCTTGAAATTCTGAATAATTTTGCTAAAAACTTAGTACAAATTCTCTGCCGAATAGCCACCTGTAAACTGGAAATTGTTAGACGGAAATACTGAATCGAGAGGCAGAGAAATTAAGCCATTAATTTGTCTAGGTTCTCTTATTAAAAGAACATTTGTCTAGTGATCAGAAGTTGCTTCGGTTATGTATGTATTCGGCCCTCCATGGAAGAAAAAAATACACAAGAGAGGCAGTGATTTCAAAGGTTGGCACCTACCCTGCGTCCCTGGCCAATAATAGGATAGCCAGGTCTTATTGTTGATCAAAGGACTCCGGCCGGCTAGCTATAGACTTTCAGCGTAGTAAAACTCTCTTTTTGCAGTAATTTAATTGGCAATTTGCCATGGGACAACTCATTCAAGGTGCAACAGTACGTTAGGGTCCACGTATAATTGATTGGTTTTATTCTTAATTAATGTGAACATATTTTAATTGCTTGCTATATATGTATAATTTAACTTAGCAATGGACTTATATTCTTTTTTGGCAACGAAATGACTATGCAAATTATTAACGCTCTCAAAATTCATAAAATCGCATATATGGTTGAATGGATGAACAAAAGCTAGCTTTAATTAAAACACAATTTGGAAATAGTTATTCCTAAATTTTTAGACAATGTACAAGTGTTTATATTTCTGGCCATAAAACAAAAAAGAAAATATTCTAAAACTCTCTAGAGAATAGAGAAAAGGCTAACGGATCTAGGTCATGTTAAATAGAATTCTGATTTATTTTATTCTCGTTTCTCATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGATCATTTTTCTCTTCGCGGATACTTTGTTAAGACGATAATTTGTTCTATAGTTTATTTAGCACTAATAGTCGTACATCCCTTAATTTGTTAACTGGTCAAGAGTGTAATAGATCTCTGACATAGACACAAACAATGTTATGTCAGGCTTGCCGGCTGCCGCATGCAATTATAGGTCTTGATGTGACTACCCCGCTTGTTAGAAAAACGCAATGCAGATCAAGATCCTAGAACTCGTTTGTTTGAAAAAAAGATCCTATAATCCTAGTTGAATCTTCCTTATAGGAGCTTTTTCATACATTTAATTTTATGCTAGCACTGAGCAATATTTGGCTGTTTATAAGTTATACATCATTAATTCTCATCCCCCTATAGTTTTTACGCAATATTTGAGCTATTTGGTCCTGAATTTCTGACCTTATTTATTCTATAATTATAGGATTGAGGAGATGTGGCAAAAGTTGTAGGCTTAGATGGCTAAATTACCTGAGGCCCAATATTAAGCATGGAGAGTTCACAGAGCATGAAGACAGGATCATCTGCAACATGTTTGCCAGTATTGGGAGCAGGTATATACATATATCACAATGCATATATAGAGTTTTCTAGATTAAGATGTACATTTAACCTTCCTTTTATTTCGATCTACTTAATTTCATCCCAAACATGCATAAGTATGACCTGTTTCTTCTCCCTAGCTAGAAGAATCCTTAGAAGTTATAATTATTTACTAGTAATATGTAGGTAGGAGTATGTCTAATCATCAGCAAATGAAGAGATACCTAACTATATATATGCTCTGATACAATTTCAAGTACACATTTGAGAAACTTTGGCATCTGTAGTAGCTAGATAGCTACCTACCCCAAGTCTTGTCTTGTAGAACAGTACAAAGATGACATGAGAAAACCTAACAAACAAGGAAAAAAGAAGAATGCATGCAAATCACTCATTTCTACTTGTCATCCATTTTAGGTGGTCTATAATCGCGTCGCAGCTCCCCGGCAGAACGGACAACGACATCAAAAACTACTGGAACACCAAGCTCAAGAAGAAGCTCCTCGGCTCGAGCGCCGTCGCCGCCGCCGCGCCGCCACGGATACAGCGTCATCAGCAGAGCCACCACCGGTCGTCTCTCCTCCTGCCGAACTCGCCGTCGCTCAATCCCGGCGGCGGCTACCCAGGCTTCTTCTCCGGCGCCGGCGGCTTCCATCCTCAGGAACCAGCTATGCCGTTAACCCTACCGATCGACACCCAGGAATTCATGCTGGGCACTCACTCTGGCCTTCCAATGGTGAAGCGCCTCTGCGCTGCTCAAACATCTGCACGGCGCATCACATCATCATCAGCTGCTTGTGAAGGAGGAGATCAGCAGCAACATGATCGTGTTCGGCTCCGACCAGCAGAGCTGCAGCTCGTCAGATGGGCTGGCGGCGCCACACAGCCACAACCACCATGGCAACAGGGAGTTCATCCTTGATGGCTACAGCTATGGCGTCGGCTACGGCAGCAGCTGCATCGATCAGGTCGACAACGACAAGCTGTTCCAGCATCATCATCAGCAGGATCAGGCACAAGAACAGCAGCAGCAGCTGGTGTACAACTACGACGAGATCAAGCAGCTGCTGATGAACACATCAACCACAAGTAATAGTATTAATGCTGGTCAGGATCATGGCGGCAGCATGGAAGCAGGGTTGATCGGCTCACAAGGGAAGGTAACCATGATGTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA011154