Os12g0284000

From RiceWiki
Revision as of 10:27, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0284000| Description = Regulator of chromosome condensation/beta-lactamase-inhibitor protein II domain containing protein| Version = NM_0010...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os12g0284000

Description

Regulator of chromosome condensation/beta-lactamase-inhibitor protein II domain containing protein

Version

NM_001073114.1 GI:115488189 GeneID:4351991

Length

4287 bp

Definition

Oryza sativa Japonica Group Os12g0284000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:10770109..10774395

Sequence Coding Region

10771409..10771634,10771708..10772059,10772149..10772550,10772982..10773360,10773843..10774088

Expression

GEO Profiles:Os12g0284000

Genome Context

<gbrowseImage1> name=NC_008405:10770109..10774395 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:10770109..10774395 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggacgccacgacgagcagtggagcttcctcctctctacccctccaccttatcatagatgatgctcttgcccttgtttctccgttgcagcagtcgtttcagaggtcacagcgccattgctttggtggctctgctcctggagaattccccttggctgcaaacccatcaattgtcctccatgtcctcacatcatgcaatctggaacctgatgacctcgctcacttggaggcaacatgctcgtttttccggaagcctgccaatttccctcccgattttcagttgtcaatgtcagaactcgcagcgttggatatgtgccagaaacgggcgatatttaaacctatgactcaacaagaaagagaaatgtttaagcaacgttgcggcgggagttggaagctggttcttaggtttataatggcaggtgaagcatgttgccggagggaaaaatctcaggcaatcgctggacctggtcacagcatcgctgtgacaacaagcggtgcagtgtatacttttgggtccaacagctctggtcaacttggccatggtagtttagaagaggagtggaggccacggattatcagatcattgcagggtattagaattattcaagcggcagcaggagcaggacgcacaatgcttgttagtgatgctggtagggtctatgcatttggaaaggattcatttggagaagtggaatatgcagcccaaggttctagggttgtcaccacaccacagctggtggaatcattgaaggacatatacattgtccaggcagcaatcgggaacttctttactgcagttttatctcgggaaggtcatgtgtatacattttcttgggggaatgacatgaaacttggtcatcagacagagccaaatgatgttcagcctcatcttctagcaggccctcttgagaacattccagttgtgcagattgccgcaggctactgctatctcctggctctggcatgccaaccaagtggcatgtctgtttattctgttggttgtgggttaggtgggaaacttggccatggttctcgaaccgatgagaaataccctaggttaatcgagcagttccaagctttgaatatacaaccagtagtggttgctgctggtgcttggcatgctgctgttgtaggcaaggatgggcgtgtttgcacttggggatgggggcggtatggctgcttgggtcacggtaatgaggaatgtgagtctgttcctaaggttgttgagtccttagtcaatgtgagggctgtccatgtagcaactggagattacaccacatttgttgtatctgataaaggtgatgtttactcgtttggatgtggtgaatcatcaagtcttggccacaacactataactgagggtaataataggcacactaatgtccttagcccggagttggtgacttctttgaaaagaacaaatgaaagggttgctcagatcagcctcactaactccatttactggaatgcacatacatttgcactgacagattcaggaaaactctatgcgtttggtgcaggggacaaagggcagctaggtaccgaactcgtcgcgcaggaaagcgagagggggacaccggagcgtgttgaaattgacctcagttag</cdnaseq>

Protein Sequence

<aaseq>MDATTSSGASSSLPLHLIIDDALALVSPLQQSFQRSQRHCFGGS APGEFPLAANPSIVLHVLTSCNLEPDDLAHLEATCSFFRKPANFPPDFQLSMSELAAL DMCQKRAIFKPMTQQEREMFKQRCGGSWKLVLRFIMAGEACCRREKSQAIAGPGHSIA VTTSGAVYTFGSNSSGQLGHGSLEEEWRPRIIRSLQGIRIIQAAAGAGRTMLVSDAGR VYAFGKDSFGEVEYAAQGSRVVTTPQLVESLKDIYIVQAAIGNFFTAVLSREGHVYTF SWGNDMKLGHQTEPNDVQPHLLAGPLENIPVVQIAAGYCYLLALACQPSGMSVYSVGC GLGGKLGHGSRTDEKYPRLIEQFQALNIQPVVVAAGAWHAAVVGKDGRVCTWGWGRYG CLGHGNEECESVPKVVESLVNVRAVHVATGDYTTFVVSDKGDVYSFGCGESSSLGHNT ITEGNNRHTNVLSPELVTSLKRTNERVAQISLTNSIYWNAHTFALTDSGKLYAFGAGD KGQLGTELVAQESERGTPERVEIDLS</aaseq>

Gene Sequence

<dnaseqindica>1301..1526#1600..1951#2041..2442#2874..3252#3735..3980#gcttttctctctctcctctcctctctctctctctctctctctcccttctccacgcacgcacatcatcattattgggaggctcgtccctgtccgtcgctcgcctgctctcatcctctccctctctctctcctcccccgtttctcggttagattcacgcctctccaacctcctcccccaaccccaagaattcccgatcgattgattgactggccgacccgcccgttggtgcgtgttcgttgatcctttttttgcctctggtgaggaggagggggtttgattcttttgtgttcttggtccaagaaccaaggggggaattagcgggtgaggatttcttggtttcttgtgggtggtgtgccgatcaattagatgtcaggttggatgattggagccgatcatggcgatgatcgcggtcctgatgatcgtctgttcggattggtgttctctgcttaaagatgatgttctcggttttggtgatcctttcatcagaatcggggcgattagcgtggatccttcgttgtttactcgaattggggtctttctttactggtaggatgttagtgggtgtgatcttttgccgccgatgatgcagttggaatcttgcttgtttgtgtgtgtactggttaactgtggatattgttgataattgttggataggataagaaaggtagacttttgtggggggtggagttgggaggaatatgctttgttttgtgagggggtggaagtggctctttgtcctttaccattttacatgttcctgttctgcatcaatcatttcttggtgcaagcctcacaaccgtctaatggtgttcttgactgggtttgggggcactgttttgagatttcagttgttttcttcctttgtttccttgatttttggaggttgttttgcatctgatttagtgtctgtttgccatccagaagaatatggcatctctatatgtttggtcagggtgatatgctctgtttgattgcattgactttgggaatgctttcaattattgatatgctctgattgtttgtttacaagtgttggatggattctttctcatccacttttctgattcggatgaataatataacatattattgtttaattgtgttaaactaaggtgtgctgatgagcttgttagagaagttacttaacaattaatgattgtagttacatgtcttgattacattaatgcattgcacattacagaatggtcctgtacttaattcactctggacttctggagagccaggaacaccacaagtttgagataaaagcataaggcagtgcaagtcgcagccgtggcagatggacgccacgacgagcagtggagcttcctcctctctacccctccaccttatcatagatgatgctcttgcccttgtttctccgttgcagcagtcgtttcagaggtcacagcgccattgctttggtggctctgctcctggagaattccccttggctgcaaacccatcaattgtcctccatgtcctcacatcatgcaatctggaacctgatgacctcgctcacttggaggcaagtagtgttttgttcttcctctccaatgtagaattgatattgccactgatgaaatttgtgcttgcgataggcaacatgctcgtttttccggaagcctgccaatttccctcccgattttcagttgtcaatgtcagaactcgcagcgttggatatgtgccagaaacgggcgatatttaaacctatgactcaacaagaaagagaaatgtttaagcaacgttgcggcgggagttggaagctggttcttaggtttataatggcaggtgaagcatgttgccggagggaaaaatctcaggcaatcgctggacctggtcacagcatcgctgtgacaacaagcggtgcagtgtatacttttgggtccaacagctctggtcaacttggccatggtagtttagaagaggagtggaggccacggattatcaggtgcttctagaatatacagttatcataactttagtcatgacacaaatgtagattaaaagagtgctaaatgtctgttggtgctcgtatagatcattgcagggtattagaattattcaagcggcagcaggagcaggacgcacaatgcttgttagtgatgctggtagggtctatgcatttggaaaggattcatttggagaagtggaatatgcagcccaaggttctagggttgtcaccacaccacagctggtggaatcattgaaggacatatacattgtccaggcagcaatcgggaacttctttactgcagttttatctcgggaaggtcatgtgtatacattttcttgggggaatgacatgaaacttggtcatcagacagagccaaatgatgttcagcctcatcttctagcaggccctcttgagaacattccagttgtgcagattgccgcaggctactgctatctcctggctctggcatgccaaccaagtggcatgtaagatttttcacccaaacatgcaactttttgtcaatgctgtgaagtatggcttagtgatatactattttttttaataaacaaaccacacgttatttgcatttagcctcactcttcactattcagccttggttaatttgacaacaattagctaataggtgaactaatgtcaagtaagtattacatttgcatgtagtatagctactgtattattttaatgttttgtatgatcagataaaataataaaaaaaactaatgtctcttattccgttataacatatgaaaaattgttttaacattttcaatgaatttgtcttttgctttgatagacaggtgaaccagtatgcaagttttgaatatttttacctatacaccagctgttatagatatgataaaactattaaaatgcttttgtcctatttttgttgcaggtctgtttattctgttggttgtgggttaggtgggaaacttggccatggttctcgaaccgatgagaaataccctaggttaatcgagcagttccaagctttgaatatacaaccagtagtggttgctgctggtgcttggcatgctgctgttgtaggcaaggatgggcgtgtttgcacttggggatgggggcggtatggctgcttgggtcacggtaatgaggaatgtgagtctgttcctaaggttgttgagtccttagtcaatgtgagggctgtccatgtagcaactggagattacaccacatttgttgtatctgataaaggtgatgtttactcgtttggatgtggtgaatcatcaagtcttggccacaacactataactgaggttaggcactagttttcatgttttgaatacttgaagttatttaacaaaaacatggagttatattttcattctgtctgcatattcacaataggctgtcaaagctcaatgctctatgattctctacacagttccataatttttgttaaatgctacactaaatgcaatttaccaattaaatcacacagtatgtatttcaatctactattgttattttctaagagtattggtcagtaatgtctgtcttccgttttgtcaaaagattgagggtctattaaccctctactgtgaatttcattttcttttagctcttcacctatctgctcatccttactcacaatgataatcttcagtgaaaagataaacacatttgctcatataccttttataactttgcatttctctctgcgaattagaatcagtataataaaccttttctttactctctgcttctgaacttgatgtatatttttttctttttccagggtaataataggcacactaatgtccttagcccggagttggtgacttctttgaaaagaacaaatgaaagggttgctcagatcagcctcactaactccatttactggaatgcacatacatttgcactgacagattcaggaaaactctatgcgtttggtgcaggggacaaagggcagctaggtaccgaactcgtcgcgcaggaaagcgagagggggacaccggagcgtgttgaaattgacctcagttaggtccaaattgcaacgccacttcatctccttttctctccagatgcactcttctaacgttaactttcaaattgattgcattgcgcgccctttagcttgttggctgttcatcagcctcatcctgctctgcagctaatccttgtgaaaatagttaccatcaattaaacagtctgttgttcatatgattggttcggtttagaaactttgtatatatgattatcatgtaaatataacagtcaggtctcattgccagttcctttaaaacatgagtagctggcttttaacatcctgtgaaatttaccttaactct</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0284000, RefSeq:Os12g0284000