BGIOSGA011206

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Revision as of 09:27, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA011206| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA011206, complete gene.| tag = OsI_105...")
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Gene Name

BGIOSGA011206

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA011206, complete gene.

LocusTag

OsI_10544

Ensembl Transcript ID

BGIOSGA011206-TA

Ensembl Protein ID

BGIOSGA011206-PA

Length

5558

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:6695554..6701111

Sequence Coding Region

6701000..6701111,6700308..6700411),complement(6699524..6699737,6696162..6696463),complement(6695920..6696072
,6695554..6695829

Genome Context

<gbrowseImage1> name=IndicaChromosome03:6695554..6701111 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:6695554..6701111 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCCTCCGATTTCTCGACTAGATCCGAGATATCATCGCGCCAGGGGACTACATGAGCTGAATCGGTTAATGTCCCTAAGGCGGGAGCAGCGCCGTCTCCAAATCGAAACCTATCAATTTCTTGCTCAATGTGCTAAAAGAAAGGAATCTCCCTGCCAACAAGATAATTCTCAATGTGTGAAGAGAATGAGATATTCAGGTCCGGACCTTCCAGAGGACATATGGCACCATATACATTCCTTGTTGCCACTGCAAGATGCTGCCCGTGCTGCTTGCGTGTCTCAGGCTTTTCTACGTTTCTGGAGGTGTCATCCCAACCTCATTTTCAGTTGGAAAACGATGGGTTTGAATAAAGTGCCACATAAAAAGGGTGGGATAGTTAGAGATTACAACAACAAAGTTGACCGCATAATGAAAAATCACTCAGGAGCTTTGGAGAGGTTGGAAATCAAGCGTTGTGGCGAGATTAATCGCCTGACAATACCTTGTCTGCTACAGCGGCTTAGCTTCCTGGGGGTATTTGGATGTTTCGGGCTACAAATGCTAGAAAGCAAAGCTCCAAATCTATGCAGTTTTCACTTTGAAGGTAAACAAGCGCAATTCTCACTAGAGGAACCTGTGCGATTGAAGAATCTGGAAGTGGTTTTCCCCAACAGTGTCTGTTATGCTCGTGTTGAGCTTCCGTTTAGTATGCCAGATATTGAAATTCTTAATGTCATTTTGTCTTGTGAGATGGTGGATACACCAACTGGCCCTGGCAAATTCCTCCACCTTAGATACTTGAGGATTACTTTTGCAACATGGAGATTTTCCTGGGCTTATGATTATTTTTCTCTTGCATCTTTTCTTGATGCTTGTCCTTCCTTGGAGACTTTCATCCTATGTATTTCACAGAAAGAGAAGCATGACTTGACATTTAAGGATGCCATATGTCTAAGGCAAATCCCCGAACACCGGCACGACAAGCTTAAGAATGTGAAGATCACTGGTTTCAGTGCCACAAGAAGCTTGGTTGAGCTAATATGTCATATTATGGAAAATACAACGTCCCTTGAGTGCCTTACATTGGACACTCTTTGCACTCAACTTCGGTGTTCTGACGGCAACATCGATGTCTGCCTCCCACCCATTGGATCAGGATGTTATCAAGGGAGTGCATAA</cdnaseq>

Protein Sequence

<aaseq>MPPISRLDPRYHRARGLHELNRLMSLRREQRRLQIETYQFLAQCAKRKESPCQQDNSQCVKRMRYSGPDLPEDIWHHIHSLLPLQDAARAACVSQAFLRFWRCHPNLIFSWKTMGLNKVPHKKGGIVRDYNNKVDRIMKNHSGALERLEIKRCGEINRLTIPCLLQRLSFLGVFGCFGLQMLESKAPNLCSFHFEGKQAQFSLEEPVRLKNLEVVFPNSVCYARVELPFSMPDIEILNVILSCEMVDTPTGPGKFLHLRYLRITFATWRFSWAYDYFSLASFLDACPSLETFILCISQKEKHDLTFKDAICLRQIPEHRHDKLKNVKITGFSATRSLVELICHIMENTTSLECLTLDTLCTQLRCSDGNIDVCLPPIGSGCYQGSA</aaseq>

Gene Sequence

<dnaseqindica>1..112#701..804#1375..1588#4649..4950#5040..5192#5283..5558#ATGCCTCCGATTTCTCGACTAGATCCGAGATATCATCGCGCCAGGGGACTACATGAGCTGAATCGGTTAATGTCCCTAAGGCGGGAGCAGCGCCGTCTCCAAATCGAAACCTGTAAGCCACCTATTTGGCTCCTAGGTCCATATAATTCATCTAGTCCTATATTGTGCTATCCGCATGACATGCTTTTTCTTATTCGATTCATGACGTGCTGTGCTATACCACTTCTAAACTGTTAAAGCCGATTCCTAAGCTTATATACGTTACAGAACGTTGAAGAAAAATCCTCTTTTTAATGTGTTTTGCTGTTTGTCCATTTTTTATGTGACCTTCAAAACATACCTAGTTGGATATATAGCACGCTTCTTCCTTTCCATGGTGGAGGCTATCATGGTTAAGAGGAGCAAGAATTATTCAGCCAAACACAACAGTGAGCAGGGTTAGATGTTATAACTACGAGGTTGGAGATTCCAACTCATTGCCTGATGGTCTTTTGGGACGGTTGCATCATTTTTCAATAATACCTCAAATGCTCAATTGACGTTTTTTTTTTATATACTGTAACAAGTTCCCTCTACTGAAATTCTTGTCTGTAACTAATGGATCCAATTTGGTTCTCTGCGTGTTTCATTGTGACTGGTATCAACCTTGGTCTTGTTGTTTTCTTCCTGTATGTAATATCATGAGCATAACATGTTGCAGATCAATTTCTTGCTCAATGTGCTAAAAGAAAGGAATCTCCCTGCCAACAAGATAATTCTCAATGTGTGAAGAGAATGAGATATTCAGGTCCGGACCTTCCAGAGGTACGCCGTAAATGCCAGAATCATATATTTGGATGTCTCAGAAAGTAATTTTATATTATCATAATCTTATCAGGCTAACAATAGATTATAATGTAAATTATTAGTCAATGTTCTGTTTTGGAGACCGTGTCAATGTCCAAAAGACTTTTTGTAAGCAGAGGGAGCTAATGTCACCGTTATTGCTCTAACCACAAACCGTTGGGTTGATCGTTAGCAAAATATTGAGTTGTGAACAAATCCTGCAATACTGCAATCTTGTACGGTCCTACATAGGGATGGCAACGGACCATTCCCTAGTGAGGGTGGTTGCACCAAAATTTGGTTTGTCAAACAAACTGGTTCTACTACAACTTAAAAAATAATCACATCGTGCACAATACACAAACACAAACTGAAAAATGAGCTCAGACTCCATTCGAATGCCATATGCATTTTATACAACCATGTGTAGAGCAACATTATAGAATGCCACTATATATGTATCTTTTTTTTTTTTGCTTTCTCTAATTGTGTTAATTATTTACTCTTGAATTCCAATATTGAGATTTTTCTAAATGCTTGTGGATGCAGGACATATGGCACCATATACATTCCTTGTTGCCACTGCAAGATGCTGCCCGTGCTGCTTGCGTGTCTCAGGCTTTTCTACGTTTCTGGAGGTGTCATCCCAACCTCATTTTCAGTTGGAAAACGATGGGTTTGAATAAAGTGCCACATAAAAAGGGTGGGATAGTTAGAGATTACAACAACAAAGTTGACCGCATAATGAAAAATCACTCAGGAGGTATAAATACATTTAGCCTTGAATTACATCCTTTTTCCAATGCCAACACCTATTATCATCTCAATAGTTGGCTTGAGATTGCTATTACATCTGGGATTAAAGAACTCACTCTCGTGTTGACTTCAAATGAGGAAAAGTACAATTTCCCATGCTCACTTTTATCTAATGAGAGTGGCGACTCTATTCAGTCTCTTCGACTTGTTCATTGTTCCTTCTGTCCAACAGTTGGCCTTGTTAGCTTGAGAAGCCTGACAAGATTGCATCTATCTTGTCACGTCCCGAACTAGACCCGAACGGAACTAGCCCGTGACGCTCCAAATTAACCTGTTAATCGATACCAGTCCCAGGAAACAGTGCTGGTATCACGGGAAGATAGAATATCACAGCAACAGTGGTCTCTTTATTACAGAGTAGGAGTACAGTCATGTTGGGCTGCGGACAGATCCCGAGCTCACAACTGCATTACAAAAGGGAAAGCGGAAGCCGAGACTTGGACCAATCATCACAGGCGCGACTTGGGAACTAAGCCGAAACCCTAAAACTCGTCGTAACCGACTTGCTCCTAGAAGAACTCCTCATCAGCGGGATCCACATCATCTTCTTCAGCAACTGGGGGGGGGGGGGAGATTATTTATATAGAGCAAGGGTGAGTACAGGAGTACTCAGCAAGCCATGGGAAATAAGTGTTTAATGCAGGCTTCAACGGGAAGGCTGTTGTTTTTGCAAATGATTTTATTCAAACTCCTTTTTGAAACATCTAAGTGAGTGCTTCTCAAACGGCACGGATGAGGCAGTGCGTCTCGTCCGGTCGGAGTATGTGCAATGTATCAGTCTTTGAATTGGTTTCAAGGTTGGCACCCGGCCAACAACTTTCAAACGGCCACCCGGGCCTGGTTGATCCCATCAGCCGCTGCAGATTTTCCAAACGTCGAACCCAATCCCCAACAGCAATTTCACAAAGCAGTAGTCAAACAAAACTACGCTATGAATCACCTCACATCCGCCCATGACCGTGGGCACAGCTGTTCGAACAGTTTGATAACCTCTGCAGAGGGGGTACACTTTACCCACACGACATTACTAACCCGAATCACCCAGCCCGTGCAGAACGGCCACGTCTGGTGACCTAAAGGTTTTCATGACAAGGCATTTCGAGAGCAGACACAGGGTTGCCATATGCCGACGAGAGGGGTCCCAGACCAACAACAGGTTAGGTCCCAGACCATACTGTGCCAGGAAGCCCGGGGGTTCTCCCCGACACCACCCCGTTGAATCCACATGTCTCTCGGCATCAAGGCTCCCCCGATTAGCTAGTTACTCAGTCGGGGTGTCCCATTCCACCCATGTGGTTGCACTTGTCTTATGTTCGGATGAAATTCCAAGGAAACGGTTCTTAAGTGCGAGAGCGGGAAACCGTGCACCCGGTACGTTCCCCGGTCCGCGATTTTGGAAATTTATTTAGTTCGCAAGCACCAACCCAGATGTCGGGTTTTCCAAGTCTTTTGTAAAACCCAAGTTTTACCCATCGTTGGATATTTTATATTTTGAGGGGGGGGGGGGAAGGGTGTTCCGGTACACGTACCTGAGGGCCCGTGCATCGAAGCACAACAGTTGACAAAGGAGGTTTAAGTGTTCAATAATTCAAGGAGGGTAATTGCAGCAATTAGGATTGGGGGGCCGGCATGCTATCTCGCAAGCCGCGGCCGAATTACTTGTGTAAATCCTATTCATGCAATATTTGCGAAAAAGAAATACTTAGATTTACATTATAGGTGCAAGATGTTCAAAGGTGACTTGCCTTGCTCGAGATCTTGAGCTTGATCCTCGAAATCCTCGCACTGCGGGTCTTCGGGCTCCGAAACTACACGCGAAACGGGACAGCTCAACAAATGGCGAAAATAAAGCCCTATTATTGACCTCTAGGCATGCCATTAGATAGATCTCGAGATTTGAGGAATTTTGGAAGTTGAACGGAGTCAAACGGATTTACGGTTGGGAAGATATTGAGTTTCTAAGATTATTGGATTTTTGGTCTAAAGGAAAAGGATTTATTTAAATCCTTTTTGAAAAAGAAAAGAAAAGAAAAGAAAGAGGGACGGGAATTAGACTTCGCGGGCGGCTTGAGCGCGGCCCGAGAGGGGTTGGCGCGGCCCGGCCTTGCCATTGGGCCGGCCGGCCTGAGGGACGGCCCAAGGGGCTCGCGGGGAGGAGAGGAGAGAGGGAGCGGGTGGGCCGGGTTCACCTTGCGTGGTCCCGGGTGGGACCCGCTTGTCGGCGGCTCGGCTCACCGTGAGCGAGGTGCACGCGGGGCGTGCTAGGGTTTGGGGAGGGGAGGCGCGGCGCATGCGCGCGGTTTGCGGAGGACACGGTGCGGCGGGCCCACGCGCAGCCTCACGGCCCGCGGTGGACCGCGCGCGCAAGCAGGGCCGGAGGGAGCGGCCGACCGAGGTCGGCTCGACCCGGTCGCGGCTGAGGTGGCATCGACGTGGCGCCTACGTGGCTGCCACGCGGGCCGGCTGGAGGAAGACGAAGGCGCCGGCCGCGAATGGACGGCGGGCGGCGGCGGTTTCTCCGGGACGCCGTGCGACGACGAGGGGCGACGGGGTGTACACCGGAATGACGAGGGAGAACGAGAGGGAGCGAGCCAACGGCTTGGATTCGCCGGAGGGAGCTCGACGGCGGCGGATTGCGGCGGCGGCAACCGGTGGCGAGGGAAGGGGGAAACGGCGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGAGAGGAATTCGGCCCATCGAACCTGAGGGAGGCNAAATAGACTTTTGCGGGGGGATTTGATTTGGGAAGGATTTGGATTCGGGATTGAACTTGACCATAGATCGGGGATTTGAGATCCGGAATGGCACGGAGACTGACTGCAAGCAAAGAAACAATTTTCGCAATTAGGGTTTTTAGGAATTACATTTTCCCGCTAGGCGCCACGACGGAACGGGCGCTACATATCTTGTGTGCGTATTATTGATACCGACATAGAATATCTTCTTTCCAATGCTTTAGCTTTGGAGAGGTTGGAAATCAAGCGTTGTGGCGAGATTAATCGCCTGACAATACCTTGTCTGCTACAGCGGCTTAGCTTCCTGGGGGTATTTGGATGTTTCGGGCTACAAATGCTAGAAAGCAAAGCTCCAAATCTATGCAGTTTTCACTTTGAAGGTAAACAAGCGCAATTCTCACTAGAGGAACCTGTGCGATTGAAGAATCTGGAAGTGGTTTTCCCCAACAGTGTCTGTTATGCTCGTGTTGAGCTTCCGTTTAGTATGCCAGATATTGAAATTCTTAATGTCATTTTGTCTTGTGAGGTATGCACCGCACTTTAGGTGATACATTGTTGGCGTGTAATGTAGTACCATGCTCTGAAATATAATTGGTCTGAGCCTTCTTTTTGCAGATGGTGGATACACCAACTGGCCCTGGCAAATTCCTCCACCTTAGATACTTGAGGATTACTTTTGCAACATGGAGATTTTCCTGGGCTTATGATTATTTTTCTCTTGCATCTTTTCTTGATGCTTGTCCTTCCTTGGAGACTTTCATCCTATGTGTAAGTTGCCGTTCATTATGCAATGCTTATCTAATAACTATGGTGGACCATTTATAATTTATTGAAGTATCATTGATTTTTCATCTTCAGATTTCACAGAAAGAGAAGCATGACTTGACATTTAAGGATGCCATATGTCTAAGGCAAATCCCCGAACACCGGCACGACAAGCTTAAGAATGTGAAGATCACTGGTTTCAGTGCCACAAGAAGCTTGGTTGAGCTAATATGTCATATTATGGAAAATACAACGTCCCTTGAGTGCCTTACATTGGACACTCTTTGCACTCAACTTCGGTGTTCTGACGGCAACATCGATGTCTGCCTCCCACCCATTGGATCAGGATGTTATCAAGGGAGTGCATAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA011206