BGIOSGA011220

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Revision as of 09:28, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA011220| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA011220, complete gene.| tag = OsI_105...")
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Gene Name

BGIOSGA011220

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA011220, complete gene.

LocusTag

OsI_10514

Ensembl Transcript ID

BGIOSGA011220-TA

Ensembl Protein ID

BGIOSGA011220-PA

Length

4716

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:6456635..6461350

Sequence Coding Region

6461190..6461350,6461049..6461106),complement(6460642..6460701,6460484..6460522),complement(6460317..6460379
,6459891..6460031),complement(6459769..6459832,6459409..6459492),complement(6459236..6459318
,6459015..6459144),complement(6458402..6458494,6457788..6457926),complement(6457664..6457701
,6457399..6457586),complement(6456635..6456733

Genome Context

<gbrowseImage1> name=IndicaChromosome03:6456635..6461350 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:6456635..6461350 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGACTCCTCCCGCTTCCGGAGTGCGGCGGCCACGGAGGCGGCGGAGGCGGAGGCGGCGGGGTGGGTGACGGTCGAGGAGTGGGCGGGCTCCTCCGCCGCCGCGCTCTCCCGCACCGCCGTCCTCACCGCCTCCCCCTCCTCCTCCCTCGCCTCTCGCAGGTTCGGAAGCCGGTGGGGGCGGGTCGGCGGCCGGCTGCTCGGCGCCTTCGTGCCCGAGGGCTTTCCTGGGAGCGTCACTCCGGATTACGTCCCGTTCCAGATGTGGGATACCTTGCAGGGTCTCTCGACTTACATCCGTGCAATGCTGTCTACTCAAGCTCTTTTAGGCGCTATTGGAGTAGGTGAGAAATCTGCCACGGTTATAGGTGCCACTTTTCAGTGGTTTCTCAGGGATTTGACAGGAATGCTCGGTGGTATACTGTTCACTTTTTATCAGGTGTCAAATTCTCTTGCTAACTCGAATAGGCAATGCCATCGTATTGCCATTGATAGTTTGTTTACTGATGAGATAACTTGCTTGGGATCTAACCTTGATAGCAATGCTAAAATGTGGCGCCTAGTTGCAGACTTTATGAATGACCTTGGGATGTTGATGGATCTCTTAAGCCCTCTGTTTCCTTCATCATTGATTGTTATAATGTGTTTAGGCAGCCTATCTCGATCCTTCACTGGTGTTGCTAGTGGAGCAACTAGAGCAGCGTTAACCCAGCATTTTGCACTTGCCAATAATGCAGCTGATATATCTGCAAAGGAGGGCAGTCAGGAGACACTTGCAACAATGTTAGGAATGGGACTGGGAATGCTTCTTGCCCATGTTACCAGAGGGCATGCTTTGGGTGTATGGGTTTCATTCCTTTCTCTAACGATATTCCATATGTATGCAAATTACAAGGCAGTGCAGTCACTTTCACTTACAACACTAAATTATGAGAGAAGTTCCATCATGCTGCAGTACTTCATGGACAATGGTGAAGTCCTCACACCACAACAGGTTTCCAAGCAAGAGCATATTCTTCCATTTTGGTCAAGCTGGCGGAAATTTCTTAGAATTAAACTGCCACATGAGCATGTACATTTAGGTGCTAAAGCCTCAAGGCTTACACACCCTGATTTGCTGCAGATTGCAAAAACAAGGCCCTACTATAGAAATGAGAACTATTTCTTGCTGGATAAGGAAGGCAGTGTTCACATTTTCATCCACAAGCAGGCAGCGGCAACAGATATTTTGATGTCCTTCATACATGGACTCGTGTTAGCACATTTGATGCAGAAGAGCAAATCTGGGCATGCGGAGGCTCGCCAATGGATTGATGAGAAATATAACACTTTTATCTCAAAGTTGCAAGTTGAAGGTTACTCAACAGAGCGACTTCTTTCACACTCGATCGTGTGGAGGGCACATTGGGTTCATGGTCCCTCTGAAGAGAAGCTCGAGTAG</cdnaseq>

Protein Sequence

<aaseq>MDSSRFRSAAATEAAEAEAAGWVTVEEWAGSSAAALSRTAVLTASPSSSLASRRFGSRWGRVGGRLLGAFVPEGFPGSVTPDYVPFQMWDTLQGLSTYIRAMLSTQALLGAIGVGEKSATVIGATFQWFLRDLTGMLGGILFTFYQVSNSLANSNRQCHRIAIDSLFTDEITCLGSNLDSNAKMWRLVADFMNDLGMLMDLLSPLFPSSLIVIMCLGSLSRSFTGVASGATRAALTQHFALANNAADISAKEGSQETLATMLGMGLGMLLAHVTRGHALGVWVSFLSLTIFHMYANYKAVQSLSLTTLNYERSSIMLQYFMDNGEVLTPQQVSKQEHILPFWSSWRKFLRIKLPHEHVHLGAKASRLTHPDLLQIAKTRPYYRNENYFLLDKEGSVHIFIHKQAAATDILMSFIHGLVLAHLMQKSKSGHAEARQWIDEKYNTFISKLQVEGYSTERLLSHSIVWRAHWVHGPSEEKLE</aaseq>

Gene Sequence

<dnaseqindica>1..161#245..302#650..709#829..867#972..1034#1320..1460#1519..1582#1859..1942#2033..2115#2207..2336#2857..2949#3425..3563#3650..3687#3765..3952#4618..4716#ATGGACTCCTCCCGCTTCCGGAGTGCGGCGGCCACGGAGGCGGCGGAGGCGGAGGCGGCGGGGTGGGTGACGGTCGAGGAGTGGGCGGGCTCCTCCGCCGCCGCGCTCTCCCGCACCGCCGTCCTCACCGCCTCCCCCTCCTCCTCCCTCGCCTCTCGCAGGTGAACCCCCGTTCCTCCTCCCTCGGATCCGCTTTGCCCCCGCTCACCCATCTCACCCCGCGACGCGGCGGCGGCGCGCGCAGGTTCGGAAGCCGGTGGGGGCGGGTCGGCGGCCGGCTGCTCGGCGCCTTCGTGCCCGAGGTGAGTGAGTCGCCGTGGTTGTGCGCATCGCCTCGCACGCGGAATCGTTGCTCTCGTTTCTCGCCCTGCTATAACACTCGCACAGATGCAATGCAATGCAAACACCCTCGAGGAATTGATCATGTTCAACTACTACTACTACTACTACTACTACTACTACTACTACTACTACTACCAACACGCGACTTGATTGATTGCTTTGCCCTCTTCGTGTCAATGGCGACCATGGGCAAAGCATGTGATTAAGGCCGGTGTCTGATGGAATTTACTGCCGTGGAGTCTTCTCCATTTTCACACTTTGAAAATTGTTGGTAACTCACGAGCGAGAGCTGCCTCTCTGTCTGCAGGGCTTTCCTGGGAGCGTCACTCCGGATTACGTCCCGTTCCAGATGTGGGATACCTTGCAGGTGAATTTTTTTTCTTGTGGCAATGAACTGTGTGTCACAATGTCTATTACCTTCGTTTTTAATAACTGCTTTGGGCTAAGTTCTTAGCCAAGTTGGTATTATGCTTTGCTTATTTGCAGGGTCTCTCGACTTACATCCGTGCAATGCTGTCTACTCAAGTAAGCTTGACGCTGCCCAATCTTCGCTCATCTTGCACTCATGTCCTGTCATATTTTGCACTGTTCTAGATGGAATGCCATATTAATTTTTGAATGGACTCCAGGCTCTTTTAGGCGCTATTGGAGTAGGTGAGAAATCTGCCACGGTTATAGGTGCCACTTTTCAGGTAAATTTCGATTTCATGTCATGGTTTAGCCTTCTGCAGTTTTTCTTACGAGCTAGGCATAACGTAAATGGTTTCTGATGAGCATACGTTAACTTCTTTTTGTGTCTTAAATTTGTGCATATATGAAATAGATTGCTTAGGTTGTTGTTTTCATTGCCCTGAGCTGCAGTCAGCTGGTAGTAACTTGCTCTGCAGTCTAGTATGTGTTTTCCCTCCTCAATTTTCTTCTTTTATGGGCTTAGTTTCAATTTCCTCATCATCTTTAATTACATGCTATTCTTGCAGTGGTTTCTCAGGGATTTGACAGGAATGCTCGGTGGTATACTGTTCACTTTTTATCAGGTGTCAAATTCTCTTGCTAACTCGAATAGGCAATGCCATCGTATTGCCATTGATAGTTTGTTTACTGATGAGATAACTTGCTTGGTCAGTATTTTATTTGTCTATAGGGTGTACTAATTCTTTGTGCTTTCACTTTTCCCAGGGATCTAACCTTGATAGCAATGCTAAAATGTGGCGCCTAGTTGCAGACTTTATGAATGACCTTGGTAATATAGTCTATATCAGTAATCGCTGTATTAATTCTTTGAATGCGGGCGTCTAATTTAAAGGTCCTGCAATCGTTTGGTATTTATATTCAAGACTAAGCATTCATTTTTCTTTTGAGGTATTCTGCTATAGTAGGTGAATATTAAATAGCATATGTGTCACATGCCCCTGCAAATGCATTTCACATGGAATCTGGATTTAAAAAATCCTTTGTTTAATGCGAATTCCTTGTAGTATCAAAGTATGCTAGCAGAGTTTGTTTGTTGGTTTTGCAGGGATGTTGATGGATCTCTTAAGCCCTCTGTTTCCTTCATCATTGATTGTTATAATGTGTTTAGGCAGCCTATCTCGATCCTTCAGTAAGCGGATTTACGTGATGAATTTCATAACCTTTTAAATTTTCTTTTAAAATGTTTGTTCGTTAACTAATTATTTGACTATCTGTATAGCTGGTGTTGCTAGTGGAGCAACTAGAGCAGCGTTAACCCAGCATTTTGCACTTGCCAATAATGCAGCTGATATATCTGCAAAGGTAACTTTGCATTATCTTGTAACATCCTAAATGCCAATTAGATGGTAAATTTCTCTAAACTGTAGCTGCAGAAGCATACTCAACTTTTCAGGAGGGCAGTCAGGAGACACTTGCAACAATGTTAGGAATGGGACTGGGAATGCTTCTTGCCCATGTTACCAGAGGGCATGCTTTGGGTGTATGGGTTTCATTCCTTTCTCTAACGATATTCCATATGTATGGTGAGTGCATCATTCCAATATTTATTTATTTTTTTTTGTAAGAAGGCCTTTATAATTGAAGAATATTATTCAATTATGAGGTCAGAGGAATATGAACAAAAGGTGTGTAGATAAGTTTTTCCATCAGGACACTGCCACAAAAACACAAATGAATAGTGAAACAAATATGGTACACTTGAATAACATGAAGAAAGCAGTTATAACAAGAATGCTGCATACATGGATTTCCTATCGAAATTTTCTATGGATTCTGGCAGTTTAAGGTATCCAGAGATTCAGACGTGGCACTAATCTGGATTTAGCTAAACTAGATAATTTTTATCTGGATCCCGAGTCCTAACCTCCTTTCTGGTCCATACCAACTTTTCACTAAATAAGTTTTGTTCTTTTCCTACTTTGTTCTTAGGAATAGGTTAGTTTGAAACCTCATTTTTCTACTTTGTACTAGATAATTTGAAGCACCACCGAGTATTTGCAGGAACTCTTCTATTTACATCTTGTTTTATTTGGGACTATTCAGCAAATTACAAGGCAGTGCAGTCACTTTCACTTACAACACTAAATTATGAGAGAAGTTCCATCATGCTGCAGTACTTCATGGACAATGGTGAAGGTGAGTACACTATTTTCCTTTTCATGGTATCATGAAATTCATGCTCTTGCGATCACTATTGCATGCGAAAAAAGCTAATGAGCCCTGGAAAGTGTTAGTAGCTTGAAGAGGATGTAAATATATTTTACTGTAGTAGTGTTTGTATATCATCAGCGGCTTAATGCTATGTGCTTTGTGCCCATTATTTTCTTCTATATCAATAAAAGCCCAAGCTTGGTCAGCTTGTGGTTAGCAGGCCATTACTAGATGCACCTAACATATTGTAACAAATTTCAAGTATAATGTGTACTGCACTCTGAAAACGTCCTGCTTCTCTATTTTATCATGAATTCATGTGTTGATGTTGAACTATTCACGGCATATGAAATCATTTCCTTAACAATAGCTTTTGCTGCTTCATCTGTGTGAATAAAAATTCCATGGCAAGCCATTACATTATTTAATCATCAAAATTTCTTGGGTGGAATTTTCCTAGTCCTCACACCACAACAGGTTTCCAAGCAAGAGCATATTCTTCCATTTTGGTCAAGCTGGCGGAAATTTCTTAGAATTAAACTGCCACATGAGCATGTACATTTAGGTGCTAAAGCCTCAAGGCTTACACACCCTGATTTGTAAGTACTAAGTTTTGAGTTATGCTTTTATGTGTTTATCACTCTATGGGGGAAGAAACATTTACTCTGTTTGTCAAATTTGATAGGCTGCAGATTGCAAAAACAAGGCCCTACTATAGAAATGGTATAACTCGTCTCTTGGTTAATGTAACACTAAACTAACTGTTGCTGACTTTTCTTTTACTTCACAAATCTATTCAGAGAACTATTTCTTGCTGGATAAGGAAGGCAGTGTTCACATTTTCATCCACAAGCAGGCAGCGGCAACAGATATTTTGATGTCCTTCATACATGGACTCGTGTTAGCACATTTGATGCAGAAGAGCAAATCTGGGCATGCGGAGGCTCGCCAATGGATTGATGAGAAATATAACACTTTTATCTCAAAGGTAAAGCCCTATACCATAGAATATAGATGTTCATGTTGCGTTTGACTTGCTACGACATTAACTGATGTTAGTTTATCCTTTAACTGATGTTAGTTTATCCTCTCAGCGTTTCTTAATTTGTGTTCACATACAATTGGTGGTAATTCATGCAAGGCCAAATCTTTAAAGAACCATCTCTCTGAGCTCTGAGCTTATATTCGTAGAATGAACACACAGTTGTAAATGCCTTCTTCTATATCATTAATGGTAGGGTTGTGGAGATGTACTATACTCCCTGACTGTCTGTTACAGCTAATGAAAAATGAGGATTCCACGCATTTGCCTGTTGTATATGACACCAAACTGCGGTGGGAGAAGTCAGATCCATAAAGTTAAGGAATGCTCTATTTTGGGTATGTCAAAAACCAAAAGCTGAGTCATCGTAACACTGGTTTTCGCCTTAGCATGGCTACCCCAAAATGGCGTATATCCCCATCGCAGATAGCAGTATAGCACCATCTTATGCACGTGTGCTGGAGTACATTCAGGTCTCTTAGTAGCCTGGTCCTTGTACTTTGTCAAAGGGTGGATTTAGGTCTGGTAACATTTTATGATATAAATGTGAATTTCAACGTTTTTGCAGTTGTCTTCTACTGATGATGATTAATTTTCTCCCCTTTGCGCAGTTGCAAGTTGAAGGTTACTCAACAGAGCGACTTCTTTCACACTCGATCGTGTGGAGGGCACATTGGGTTCATGGTCCCTCTGAAGAGAAGCTCGAGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA011220