BGIOSGA011238

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Revision as of 09:28, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA011238| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA011238, complete gene.| tag = OsI_104...")
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Gene Name

BGIOSGA011238

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA011238, complete gene.

LocusTag

OsI_10470

Ensembl Transcript ID

BGIOSGA011238-TA

Ensembl Protein ID

BGIOSGA011238-PA

Length

4002

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:6154994..6158995

Sequence Coding Region

6158837..6158995,6158583..6158643),complement(6158429..6158475,6158128..6158214),complement(6157944..6158036
,6157702..6157792),complement(6157229..6157277,6156189..6156305),complement(6155964..6156111
,6155710..6155802),complement(6155208..6155250,6154994..6155094

Genome Context

<gbrowseImage1> name=IndicaChromosome03:6154994..6158995 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:6154994..6158995 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGTTCAATTCAGGAGCATTTGGGGGTTTGTTGGGTGTCATAACAGTGGCATTGATGGCTTTGCTGTGACAATTTCTAGGTACCTGAGGGAGGATAAGCCCCATGGATCAGCTGGAGGGCTCTACAGCTTCAGGGATTACATCATGGAGGACAGTCCGTCGCACATTGTTTTGTTGAACTGTGATGTATGCTCGAGCTTCCCCCTGCCAGACATGCTCGAGGCCCACAAAAAGTATGGTGGAATGGGTACTTTATTAGTCAATAAGATTCTGATCACTAATTGTTATCACCATCTAATCATTGTAGAGGCCCACAAAAAGTATGGTGGAATGGGTACTTTATTAGTCAATAAGGTCTCCGCAGAGTCTGCAAACCAATTTGGTGAGCTCGTAGCTGACCCTGAAACAAATGAACTGTTACACTACACAGAAAAGCCAGAGACTTTTGTGAGTGATCTCATAAATTGTGGGGTCTATATATTTACACCCAATATCTTTAATGCCATCGAGGATGTCTTAAAACAGAAGAAAGACAGAGCTAACCTGCGCCGTGTCTCTAGTTTTGAAGCTCTTCACTCGGCAACAAAAGCACTTCCAGCAGACTATGTTAGGTTAGATCAAGATATTTTATCCCCTCTAGCAGGAAAGAAGGAACTTTACACATACCAGACTCTCGACTTTTGGGAACAGATCAAGACCCCAGGGATGTCTTTGAGATGCTCTGGCCTATATCTTTCTCAGTTCCGCCATACCTCTCCTCATCTTTTAGCCTCAGGAGATGGCAAAAGGAGTGCCACTATTATAGGTGATGTGTACATTCATCCGTCTGCAAAGGTTCATCCAACAGCAAAGATCGGTCCTAATGTCTCAATATCAGCAAATGCACGTATTGGAGCTGGAGCCAGGCTTATTCATTGCATTATTCTGGATGATGTTGAAATTATGGGTGAAGGTGACCATAACGCCAAACTCGGTATCACAATTCTTGGTGAAGCCGTTGATGTTGAAGATGAAGTGGTTGTAGTTAACAGCATTGTGCTCCCCAATAAAACTCTCAATGTCAGTGTGCAAGAGGAGATCATATTATGA</cdnaseq>

Protein Sequence

<aaseq>MVQFRSIWGFVGCHNSGIDGFAVTISRYLREDKPHGSAGGLYSFRDYIMEDSPSHIVLLNCDVCSSFPLPDMLEAHKKYGGMGTLLVNKILITNCYHHLIIVEAHKKYGGMGTLLVNKVSAESANQFGELVADPETNELLHYTEKPETFVSDLINCGVYIFTPNIFNAIEDVLKQKKDRANLRRVSSFEALHSATKALPADYVRLDQDILSPLAGKKELYTYQTLDFWEQIKTPGMSLRCSGLYLSQFRHTSPHLLASGDGKRSATIIGDVYIHPSAKVHPTAKIGPNVSISANARIGAGARLIHCIILDDVEIMGEGDHNAKLGITILGEAVDVEDEVVVVNSIVLPNKTLNVSVQEEIIL</aaseq>

Gene Sequence

<dnaseqindica>1..159#353..413#521..567#782..868#960..1052#1204..1294#1719..1767#2691..2807#2885..3032#3194..3286#3746..3788#3902..4002#ATGGTTCAATTCAGGAGCATTTGGGGGTTTGTTGGGTGTCATAACAGTGGCATTGATGGCTTTGCTGTGACAATTTCTAGGTACCTGAGGGAGGATAAGCCCCATGGATCAGCTGGAGGGCTCTACAGCTTCAGGGATTACATCATGGAGGACAGTCCGGTCTGCTCGTGTTCCCGATTATCAGCTTGAATTTCGGAATTCAATTAACATGAACTTGCTGGGATTAATTGTAGTGGGTTTCTTCACACTGGGCTGTTTGACTAGTGTTGGCTAATTTGGGTGATATGCAAAGCGTTGGGTTGGATTACAGGAAGTTTTATCTTCTAAAACAACTCTCCTTTTGGTTTTGCAGTCGCACATTGTTTTGTTGAACTGTGATGTATGCTCGAGCTTCCCCCTGCCAGACATGCTCGGTAGGTTGCTAAGTTACTGAACTTGGGATAGTTCATTGTGTCTCTCAGCTGTGTTTGTTTATGTTAGATTCTGATCACTAATTGTTATCACCATCTAATCATTGTAGAGGCCCACAAAAAGTATGGTGGAATGGGTACTTTATTAGTCAATAAGGTGCGAGGACACTACAACAGACCTTTCTGTCTGTGTTTCTAAAGTCCTGATATTTCATACATAACGTTACTGCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTGTAGAGCTTCCCCTGCCAGACATGCTCGGTAGTGCTAGTACTGAACTGGGATAGTCATGTGTCTCTCAGCTGTGTTTGTTTATGTTAGATTCTGATCACTAATTGTTATCACCATCTAATCATTGTAGAGGCCCACAAAAAGTATGGTGGAATGGGTACTTTATTAGTCAATAAGGTGCGAGGACACTACAACAGAACCTTCTGTCTGTGTTTCTAAAGTCCTGATATTTTCATACATAACGTTACCTGCTTACAATTTTTGTCAGGTCTCCGCAGAGTCTGCAAACCAATTTGGTGAGCTCGTAGCTGACCCTGAAACAAATGAACTGTTACACTACACAGAAAAGCCAGAGACTTTTGTAAGTACAAGTTCTGATCATGCCTTGTTTTCCTTGCTATTCTATTTCTCCTCTTCGGATGATGCTTGTGCTTTTTGGTTTTGAATTGCATCAGCACTTTAGCATTTTGATGGTTCTCTAATTCGTTATTAACAATGCTCTTTATGTGTAGGTGAGTGATCTCATAAATTGTGGGGTCTATATATTTACACCCAATATCTTTAATGCCATCGAGGATGTCTTAAAACAGAAGAAAGACAGAGGTAATATGTTTAGCTATATCTTGACTTTTGCCTTGTAAACTGATGTTATGATTCAAAAAGTAGCCCACAATTATTCAATCACGTTGCATGGAAACTTTCTGGTATACTCAGCTTATAACATCTAAGTTCTCTGGTGTTTTAAATTTTTTCATATAAGAAAATAATAATCATTAGAAACAATTATTATTCGGATCAGGTGTGACATGTCCTGTTCACTATAATGCACGTCCATTGGAAACTTCCGTTCCTAAAACTATGCTAATAATTATGCTAGTAACTGTTCCTGGGATCCTCCCTTTCCTTAAATGGGAGAAACTACATTCCCTCAATTCAGTTAACATTTCTGCATTGCTCCTTTTTTGTCCAGTATTGGTTCTTCTTATTCACAACATAAAACTTATTCCTTTCCAATGCTAAATTTCAGCTAACCTGCGCCGTGTCTCTAGTTTTGAAGCTCTTCACTCGGCAACAAAGTACGTGTATGATGTATTCTTCTATTCATTGTCCTGCATATTTAACACTATTTCAAATTAAGTTTTTCTCAGTTATGGAAAAGTTTTAGATGCATTGCAAAGAATAAGCACACTGTAATCTATAAGTGCATCACCAGGAAGTTGAAAACAAACTGAGAAACCTAGGGAAATATTCTATTTCCTTTATAACTTATGATATCAATGATCTCTAGTAGATTAATTTCTCGTTAGATATATGTACTATCCAGGAATGAGGAATCAACACTTTTGACTTCTGAATATTAAATGTAACAGCACACTAATGAAAGCTGCCACTGGAATTTGGTCGTATCAAAGTTTTATGTCTTGTATTATTGTACGTACAACTCAATAATCAAGTACTCAACATGTATTTTTCCTGTCGGCTTTTGCTTGTCATTTGTGGCATCTCCAGTGTTTTTTTTTTTTTGGATAACTTTAGTAAAGTTGGTTTGGTACCATGAACCTGGCATGATAATGATAATGACTATCACACTTTTGTGAAGCTGTATTCTTCCCTTATCCCTTCTATATATCCCAGGAGGAACAGTGCACTGCCTAGAACACTTACATTTTGTTTTAATCCAGTTTAACAGCCATCAAAGCATGCAACAGAGAGAAACGAGGAAATGAGTAGACTAAACCTAGCTTACGCCTTGCTGGTTTTGTAGAAGATATATATATTTTTTGTTAGTGTTAACTTAATTAAGCGGCTATGTGTAGCAACACAATGTGGATTGTGGAAACCAGAATCATAGCCTCCACTTTATTTGTAATGTATAGTTACTGTTGGCACTAGTCATCCCTGGTTATAATTTTTGCCATTCAGGACTTGTTAGACTAAGTACAATAGAGCTGCCATTTATTTGTTGCAATACTGACCATCTTGTTGTAATTGTCAACAGAGCACTTCCAGCAGACTATGTTAGGTTAGATCAAGATATTTTATCCCCTCTAGCAGGAAAGAAGGAACTTTACACATACCAGACTCTCGACTTTTGGGAACAGATCAAGACCCCAGGGTAATAGTTGTTCCTAACTGCACTCTTTCTAACTTTGGAATTGTTAAGTAATAATGAGAGACTGCACCTATGCATAGGATGTCTTTGAGATGCTCTGGCCTATATCTTTCTCAGTTCCGCCATACCTCTCCTCATCTTTTAGCCTCAGGAGATGGCAAAAGGAGTGCCACTATTATAGGTGATGTGTACATTCATCCGTCTGCAAAGGTTCATCCAACAGCAAAGGTGGAGTCTGGTTCTCTATTTTGATTAGATTGTGTTTCATCCTGCTATCTCATATACTTCTCTGTTTGATTAGTTTTAGTTTTATGAAGTGATGAGGGACATTGTCTTCTAATATGAATTTTCGCTAAAGCTAACCCAGTTTAGTAATGCTCCATTAACAGATCGGTCCTAATGTCTCAATATCAGCAAATGCACGTATTGGAGCTGGAGCCAGGCTTATTCATTGCATTATTCTGGATGATGTTGAAATTATGGTTAGTTTTCTACGTACCATATGATAAACCTAATCTCGCTAACATGTATCTCATGCAGTTTCTTTGGTGGCAGGAGAATGCAGTTGTTATACACTCAATTGTGGGGTGGAAGTCAACCGTAGGAAAATGGTCACGTGTACAGGCAAGTATTATATTGTTGCTCATTTTAAATGTTTTGCATTCCAAGTGTTTTGGAATAGTTCATCATATCCAATTCAAGAGGCAAGAAGAATATCGTAATGCTTTAATGCAAATTCCTTTGCTGTCTAATTTTGTTCCCTAACATTTTTAGCATATAAATTTGGGTTTTCTGTAGTTCCATCTACAAGATTTATACATTTTTCTCAGAAAATACTTCTGCACGTATTTAGTTTGCTTAATTTCAAGTCTGGCGTGATTGCTCAACCCAGTGAAATGCATCTTTAGGCTCATTTAATGAAAGTTTTATTTTTCATTCAGGGTGAAGGTGACCATAACGCCAAACTCGGTATCACAATTCTTGGTAAGACCCAGTCTGCACATGGCCTCCCACAAGAATCTTGTGATAATATGCTTTGTGCGTGTGGGTTAGTTCCTATGATTGAGTTGACACATTATCTCTATTTCTAAATGCAGGTGAAGCCGTTGATGTTGAAGATGAAGTGGTTGTAGTTAACAGCATTGTGCTCCCCAATAAAACTCTCAATGTCAGTGTGCAAGAGGAGATCATATTATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA011238

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA011238&oldid=56061"