BGIOSGA011240

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Revision as of 09:28, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA011240| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA011240, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA011240

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA011240, complete gene.

LocusTag

OSJNBA0014O06.12

Ensembl Transcript ID

BGIOSGA011240-TA

Ensembl Protein ID

BGIOSGA011240-PA

Length

3383

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:6123252..6126634

Sequence Coding Region

6126616..6126634,6125919..6126017),complement(6124331..6125424,6123970..6124243),complement(6123252..6123478

Genome Context

<gbrowseImage1> name=IndicaChromosome03:6123252..6126634 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:6123252..6126634 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGAACGTCCCTATAGTCGATCCTTTGCAGGGGGATTTCCCTGAGACGATTGAGGAGTTCTTGCAGTATGGGAGTATGAAATGCATAGCATTCAACCGCAGAGGAACTCTCCTTGCTGCTGGATGTGCAAATGGTAACTGTGTTATCTGGGACTTTGAAACAAGGGGGATTGCAAGAGAACTGCATGATAAAGATTGTACTGCACCTATAACAAGTGTGGCCTGGTCTAAATATGGTCACCATTTGCTCGCCTCTGCTACTGACAAGTCATTGACACTTTGGCATGTGGTAAATGAGAAAAAAATTGCCCGCATTACTCTTCAGCAGACTCCGTTAAGTGTCCGTCTTCATCCTGGTGGTCCATCTACCCCATCTATTTGTTTGGCATGCCCTCTCTCGTCTGCACCTATTCTTGTTGATTTAAACACTGGAAGTACTACAGTTCTCCCAGCTTTTCTGTCTGATAATGGTAACCTCCCTGCTCCTAATACTCGCAATAAATTTTCTGATGGTTCTCCACCTTTTACACCAACTGCTGCAACATTTGACAAGTATGGGGATCTGATATATGTGGGCAATTCCAAGGGAGAGATATTAATTATAGATTCAAAAAGCATCAAGGTACATGCTGTGATTCCCATCCCAGGTGGAACAGTAGTTAAGGATATTGTTTTCAGCAGGGATGGCCGATATCTACTCACAAACTCTAATGATCGGGTGATTAGAGTCTATGATAATCTTCTGCCTGTTAAAGGTTCTGGAGAGGAGATAGAAAAAATAAGCAGTAACAACATTAGCTATGAGAGTCACTACGAGAAGCTAAAAGCAAATGGTGCAAGCTGCCTAGCTATTTCTTGTGAACTTTTGGATGCTATCGCAAAGATACCGTGGAAGGCACCATGCTTTAGTGGTGATAGTGAGTGGATTGTTGGTGCTTCAGCAAGCAAAGGAGAGCACAGATTGTGCATATGGAACCGATCAGGACGTCTTGTAAAAATCCTTGAAGGTCCAAAGGAAGCTCTTATTGATATTGCTTGGCATCCAGTAGATCCTACAATTGTTTCAGTGTCTGTAGCAGGCTTAGCATACATTTGGGCCAAGGAACATGTAGAGAATTGGAGTGCATTTGCTCCTGATTTTGTAGAATTAGAAGAAAACGAAGAGTATGTTGAACGAGAGGATGAGTTTGACTTAAATGCATATGTAGAAAAGGCTGAAGAACAACTGGTAAACGAGGATGAGTATGTCGATATTGAGACATATGATAAAAACTCAACGTTCAGTGATTTGGATGATAGCAGTAGCACAACGATGGAGCTCATCTACTTGGCAGCTATTCCTATCCCAGACACTCCCGATGAGCAGCCCGACAAATGCCTTGGAAGTTCATCGAAGTTGGAGGACAGCAATCATTCTGATTCCCCATCCTCATTGGATGCTGTACAGAATGGACAAGCGATTCCTCCAGCATCTAGTCCAATGGAAGTGGATAATTCTACTGCTGAAGAACCAGCTGAAGCCGTGAACTCAAAGAGGAGGCGGAGGCTGTCGGCTAAGGGCCTCGAGCTGCAGCAAGCCGAGAAGGGCAAAAAACCAACAACAAAGAATAAGTCCAACGGCAAGTCCCCAGGGTCCAATGGCAAGCAATTGGAGCCTGCTAACGGGAACAGCTCTGCTGTTGATGATGAAGCCACCGAAGACGATGAGATCTGA</cdnaseq>

Protein Sequence

<aaseq>MNVPIVDPLQGDFPETIEEFLQYGSMKCIAFNRRGTLLAAGCANGNCVIWDFETRGIARELHDKDCTAPITSVAWSKYGHHLLASATDKSLTLWHVVNEKKIARITLQQTPLSVRLHPGGPSTPSICLACPLSSAPILVDLNTGSTTVLPAFLSDNGNLPAPNTRNKFSDGSPPFTPTAATFDKYGDLIYVGNSKGEILIIDSKSIKVHAVIPIPGGTVVKDIVFSRDGRYLLTNSNDRVIRVYDNLLPVKGSGEEIEKISSNNISYESHYEKLKANGASCLAISCELLDAIAKIPWKAPCFSGDSEWIVGASASKGEHRLCIWNRSGRLVKILEGPKEALIDIAWHPVDPTIVSVSVAGLAYIWAKEHVENWSAFAPDFVELEENEEYVEREDEFDLNAYVEKAEEQLVNEDEYVDIETYDKNSTFSDLDDSSSTTMELIYLAAIPIPDTPDEQPDKCLGSSSKLEDSNHSDSPSSLDAVQNGQAIPPASSPMEVDNSTAEEPAEAVNSKRRRRLSAKGLELQQAEKGKKPTTKNKSNGKSPGSNGKQLEPANGNSSAVDDEATEDDEI</aaseq>

Gene Sequence

<dnaseqindica>1..19#618..716#1211..2304#2392..2665#3157..3383#ATGAACGTCCCTATAGTCGGTGAGTTTCGTCTCTCTCTCGCATTCTGCGTGGGGGCGGCGGGATGGGTCGGGGACGCGGTGATTGGAGCGATTCGGGGGTGGGTAGGTCGAGAGTTTGGGGGATTTGTGCGGTACTTCCGCCGATTTGGGTGGGATTTTAGGTTTTTAGGGCGGATTTGCGCGAATTAGGGCTGCGCTGTTTGGCCCTAGTTTCCGCCCTCTTTTGGTGATTTTGGGACTTGTGGGTAACATTAGCGTGTATTTGTGCTATAGTGAACGCTTTTGCTGGTTTCTGTCTCCTGGATGCATTGAAATGACGTGGTATTCAAGATTTAGGCTCAGATTTTCGATTGTTTTGCTTATCTAGGAGTAGGATTTGAGAAGATTTGCAGTATTGGCCTATTGGTTAAATTTGGGAATGCACTGGTGCCTTTACTAGTGGCGCTGCATTTTCTACGTGCATCAAATTCTGAAATTTTCTGTTCAGATAACTGGTTCTTTTGCAATTACGGATGTTGTGCTAAGAGTCAATGAGCATTGTCTTGTGTTTTTTTATGATAAAACTACAGTGAATTTTGCAGCAATATACTGACCTCTGCTATGTTATGTTGGTTTAGATCCTTTGCAGGGGGATTTCCCTGAGACGATTGAGGAGTTCTTGCAGTATGGGAGTATGAAATGCATAGCATTCAACCGCAGAGGAACTCTCCTTGCTGGTAATTATCCCATTTTATATTCCTGTAACAGTACACTTAAATTGTGCTCATATGTAATTATCTTCTTATTTCACACAGACTGTTTATTTTACACTGTGCGCTTGTGAAGCATGCCTGCACGATTAATGTTAGTTTTAATCTGTTTGAAGTTTCTTTAGCTGTTAACACTTAACAGTAACCAAAGCCATTTCTTGTAGCCTGAAGTAGTTCCTTTTCTTCTTTTGTGTTGTCACCGCATCTCTATTTATCTTGGCATTGCCACATATAAGTATAACATGATGATATGATAAGGGATCTGTTTACTTTAATGCATCCTTTTGTTCTTTTCTAAGACTAACCTGTGCACACCTGTAAGGCCTTGTGATATATCTATACACAGATGTAAAAACATCATTCATGTGGAGTGCCATAAATTTTGGTGGACTGCTGCTTTGTACTTGAACCCTGAAAGCAAATTTATCCGACAATTTATGTCAGTTGATTTTTTTTTTCAGCTGGATGTGCAAATGGTAACTGTGTTATCTGGGACTTTGAAACAAGGGGGATTGCAAGAGAACTGCATGATAAAGATTGTACTGCACCTATAACAAGTGTGGCCTGGTCTAAATATGGTCACCATTTGCTCGCCTCTGCTACTGACAAGTCATTGACACTTTGGCATGTGGTAAATGAGAAAAAAATTGCCCGCATTACTCTTCAGCAGACTCCGTTAAGTGTCCGTCTTCATCCTGGTGGTCCATCTACCCCATCTATTTGTTTGGCATGCCCTCTCTCGTCTGCACCTATTCTTGTTGATTTAAACACTGGAAGTACTACAGTTCTCCCAGCTTTTCTGTCTGATAATGGTAACCTCCCTGCTCCTAATACTCGCAATAAATTTTCTGATGGTTCTCCACCTTTTACACCAACTGCTGCAACATTTGACAAGTATGGGGATCTGATATATGTGGGCAATTCCAAGGGAGAGATATTAATTATAGATTCAAAAAGCATCAAGGTACATGCTGTGATTCCCATCCCAGGTGGAACAGTAGTTAAGGATATTGTTTTCAGCAGGGATGGCCGATATCTACTCACAAACTCTAATGATCGGGTGATTAGAGTCTATGATAATCTTCTGCCTGTTAAAGGTTCTGGAGAGGAGATAGAAAAAATAAGCAGTAACAACATTAGCTATGAGAGTCACTACGAGAAGCTAAAAGCAAATGGTGCAAGCTGCCTAGCTATTTCTTGTGAACTTTTGGATGCTATCGCAAAGATACCGTGGAAGGCACCATGCTTTAGTGGTGATAGTGAGTGGATTGTTGGTGCTTCAGCAAGCAAAGGAGAGCACAGATTGTGCATATGGAACCGATCAGGACGTCTTGTAAAAATCCTTGAAGGTCCAAAGGAAGCTCTTATTGATATTGCTTGGCATCCAGTAGATCCTACAATTGTTTCAGTGTCTGTAGCAGGCTTAGCATACATTTGGGCCAAGGAACATGTAGAGAATTGGAGTGCATTTGCTCCTGATTTTGTAGAATTAGAAGAAAACGAAGAGTATGTTGAACGAGAGGATGAGTTTGACTTAAATGCATATGTAGAAAAGGTGAATGACAATTCTTTACCTGTCTTTAAGACTTTTAGCTGTTACTCGTGCCATAAAAATGTGTTTTATCTAAATCTTTCTGTATAGGCTGAAGAACAACTGGTAAACGAGGATGAGTATGTCGATATTGAGACATATGATAAAAACTCAACGTTCAGTGATTTGGATGATAGCAGTAGCACAACGATGGAGCTCATCTACTTGGCAGCTATTCCTATCCCAGACACTCCCGATGAGCAGCCCGACAAATGCCTTGGAAGTTCATCGAAGTTGGAGGACAGCAATCATTCTGATTCCCCATCCTCATTGGATGCTGTACAGAATGGACAAGCGATTCCTCCAGCATCTAGTCCAATGGAAGGTAAAGTGCTAGACTATGGTAGTATTTCATTTCAGTTCTTATTATTATGCAATAATATGTGGTATGATAGTATCACTTTTATTTGTTTTTCAATTGAAATCTACTAGCAGTGTGGTACATTTTGTATTGATCTAAAGAATTGCACAATTTCTTCACACAAGGGAACACTGTAGTGCAGTCATTATGGTGAGATATAAATTGAACCTGGTCCTTAGTTTAATTGAACAAAATTGTAGCAGTTTACTCATTTCATATATATGTATAATATAAATGCACAGTTGGGAAACCATGTTATTCAAAGAAAACTACAGGTCATCATATGCAAAGTTGCAAACTAGAATAAGTTGAAAGTATTGGCAATAAATGACAATGTATTTCTAGGCAGAAAGAGGATCTTGTTTCAAGTATTCATTCAAGATAATTCCACCGTCAATTATACTGCTATTTTCTCTGAAACATGGGCATCATTCTTAGTTTTATTTCTCTGGCAGTGGATAATTCTACTGCTGAAGAACCAGCTGAAGCCGTGAACTCAAAGAGGAGGCGGAGGCTGTCGGCTAAGGGCCTCGAGCTGCAGCAAGCCGAGAAGGGCAAAAAACCAACAACAAAGAATAAGTCCAACGGCAAGTCCCCAGGGTCCAATGGCAAGCAATTGGAGCCTGCTAACGGGAACAGCTCTGCTGTTGATGATGAAGCCACCGAAGACGATGAGATCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA011240