Os09g0380000

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Revision as of 07:24, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0380000| Description = Similar to Acetyl-CoA synthetase-like protein| Version = NM_001188882.1 GI:297726894 GeneID:9271425| Length = 3435 b...")
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Gene Name

Os09g0380000

Description

Similar to Acetyl-CoA synthetase-like protein

Version

NM_001188882.1 GI:297726894 GeneID:9271425

Length

3435 bp

Definition

Oryza sativa Japonica Group Os09g0380000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:13421936..13425370

Sequence Coding Region

13424665..13424807,13424925..13425141,13425243..13425370

Expression

GEO Profiles:Os09g0380000

Genome Context

<gbrowseImage1> name=NC_008402:13421936..13425370 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:13421936..13425370 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>attacaatattttcttatactattttctcattactgaataacttccaggatgcaaaggtgactatgcttgggttggtacccagcattgctcgttcatggaaaagtacagattgtacagctgggtttgattggtcaaccattagatgttttagctcatccggggaggcatccagtgtggatgattatttatggttgatgggaagagtttgctacaaaccagttatagagtactgtggaggcacagaaattggtggtggatttgttgctggatcattgctgcaacctcaagcattatctgcattcagtacacctgcaatgggttgtaacctgtttattcttgacaacaatggaaatccattaccacaagattctgttggtactggagaacttgcgcttgatccaaccttcctgggagcttcaacaacattgctgaatgctgatcatcatgaggtgtacttcagtggaatgccagaatggaacgggaaagt</cdnaseq>

Protein Sequence

<aaseq>ITIFSYTIFSLLNNFQDAKVTMLGLVPSIARSWKSTDCTAGFDW STIRCFSSSGEASSVDDYLWLMGRVCYKPVIEYCGGTEIGGGFVAGSLLQPQALSAFS TPAMGCNLFILDNNGNPLPQDSVGTGELALDPTFLGASTTLLNADHHEVYFSGMPEWN GKV</aaseq>

Gene Sequence

<dnaseqindica>2730..2872#2990..3206#3308..3435#ggtgcacctgtccgcgacgcatctgccgcagcttcgcagcagcagcagcatcatgggccacgccgccgcagccgccgcggcggcgcacgtgccgctgggcgcgatcaccgtcgacgacctcctcgccgcgggggtggcgggtggtgcggcggcggagctgcacgaggcggtccggcgcgcggtgggcgcgcgcggcggggacggggatgcggcggcggtgtggggggagctctgcagggccgcgctccgcccgggcgtgccgttcgcggtgcaccggatgctctactacggatgcttcgccgggttcccctccgccacgccgccggcctggacccccgacccgtaagccttcctccttttctctctcgatcctccaatccgctgattgagatgaggtcgctcgccgacgccgaagctgttctactaatctgctgtggtttttggtggtgggaaaattgttgcagggaggaggccgtattgaccaatgtcggccgcgtcctcgaggcgcgagggagggagttcctcggcgacaagtacaaggatccaatcgctagcttcaccgacttccacaagttctccattgagaatccagaggttgtggaagatgcaaaaatcttgccctcattgatccattgtttgcgattattgctgttttactgttgttagaggtgagcttacagtgtcagtttggccactgtttttcaagggcaggcgtactggaagatggtgtttgaggagatggggattactttcagtgtggagccatcttgcatcctgagggagaacgatgcttaccccggcggcgagtggttgcccggcgccgtgctgaatgctgctgcgaattgcctgaccgcgaagcccggaaggagttccgacgacgttgctatcgtgtggagggatgaggggaaggattctgagcccctcaactttgttactcttgaggaactgaggaaaaaagtttggtaatgactaatggcatttatatctctagagagggcaagtcgggtgtatataaatatgttttgtggcaatctgattccggaatcgattcttcttgttttgtttggagcagcctggtggcaaatgcgcttgatgcactcaacctggctaagggatccgcgattgccattgacatgcccatgaatgtgaatgctgttgtgatctacctggcaattgtgttggcaggctatgtggttgtctcaatcgcggacagctttgctgctcccgcaatatcaatgaggctaaagatatcagaagcaaaagcaattttcacccaggtatttgcttaattcacatttctcctgaaaccattgatgaacatgttgctcctttgctcaatagtttcagcttctatagggcaaagttttggtcatgcggactgacagctttaatttttcatgctaggattacatccttcgagatgacaaggaattgcctttgtacaggtgccttaacctttaaatgcacaggcttatagatcagtgttcgtattattagaatttgtctctaacatcatagctttcattctacagtagagttgtggaagctaaggcccctatgacaattgtgatccctgtaaggggatcaacaccaataaaaggactgcgtgctgatgatctgtcctgggaagattttcttgcaaaagttaaccatgccaagtaagtttgctacattctgatcatggtttcctttttttggtaaaatggccggtggctgcacgtggaatgactggtgtatctgcaaatttttgtcacattggatatgccgttactgcctaaattgtggagcagtcgccaaaattttccagtgcagcacgttcataatgtgtggtgtgcaaactccagaaaatttctgggtagttagcttggaaataatttacactacctctcagaaatacatgtttcttgaattaagtatgtattactatattatgcaataatgtgacaaaattgcagggctgataattataccgctgttgagcaacctgcctatgccttcaccaatatcttgttttcgtcagggactacaggtgagcactagtctagataacatgtctgttttgtgacttttgtgtgctctaccttaaccattcacaaatatttgttgtaatattgtgcatcacaatcatgtcatagtagatcctccttatgattatgagttccaatattgttcaaaatctgatagttgtcatattcaggggagccaaaagcaattccatggacacacttaacacctctgaagtcagctgctgatggatggtgtcacatggatattcgcagaggtgatgttgttgcatggcctactaacctcggttggatgatgggcccatggcttgtttatgcctctttactgaatggagcttccatggctctttataatggctccctgaatagttcaggctttgcaaagtttgtacaggtatggatgcttcatggtagaatgttcaacctcatgaaaatcagtatcagaaactgtgcactatcttttgattttgttcaaatacataataagaattctcctaagtatcagtgtcaaaatgtttccaaaataatttagaatgtgtgaatagctcctgtgtaggcctatgcttttccagttaagttcttttggtagtaataatacagatggatgatgttccttaactttgttagtaggaacaatgaacagcgtagccatgaaatttctgatactctctttttctgtatatattctacaatttttcagtttgaattacaatattttcttatactattttctcattactgaataacttccaggatgcaaaggtgactatgcttgggttggtacccagcattgctcgttcatggaaaagtacagattgtacagctgggtttgattggtcaaccattaggtaatttcttgagtggtttggactttacctcttttgttttagcttgtgtaagggaaatattgtgtatctctttggatgatatggtttgtgactgattatattgttccttatatatagatgttttagctcatccggggaggcatccagtgtggatgattatttatggttgatgggaagagtttgctacaaaccagttatagagtactgtggaggcacagaaattggtggtggatttgttgctggatcattgctgcaacctcaagcattatctgcattcagtacacctgcaatgggttgtaacctgtttattcttgacaacaatggaaatccattagtaagtattctggaatagaaaattagaaaaatttcttgcatgagtaacatagaattagtttctattgtgtgtatctccgcttaagcttgcaaactatgcagccacaagattctgttggtactggagaacttgcgcttgatccaaccttcctgggagcttcaacaacattgctgaatgctgatcatcatgaggtgtacttcagtggaatgccagaatggaacgggaaagt</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0380000, RefSeq:Os09g0380000