BGIOSGA011286

From RiceWiki
Revision as of 09:29, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA011286| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA011286, complete gene.| tag = OSJNBA0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA011286

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA011286, complete gene.

LocusTag

OSJNBA0064E16.6

Ensembl Transcript ID

BGIOSGA011286-TA

Ensembl Protein ID

BGIOSGA011286-PA

Length

4665

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:5408213..5412877

Sequence Coding Region

5412548..5412877,5412184..5412232),complement(5411862..5412069,5411599..5411773),complement(5410270..5410335
,5409874..5410104),complement(5409507..5409633,5409117..5409403),complement(5408815..5409008
,5408648..5408733),complement(5408464..5408540,5408213..5408365

Genome Context

<gbrowseImage1> name=IndicaChromosome03:5408213..5412877 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:5408213..5412877 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGGACACGGCGGCGGCGGTCGAGACGCCGGTGACGGTGTCCACATTCGGTGTATCCAGGCACCCGGACACGGCCAGGCTCGTGCTGAGCAGCCCCAAGCCGCCAGGCGTGCGCGAGGAGTTCGTCGGCGTCGTCCGCAAGGCGTTCCGGCCGCGGGCGAGCGGCGGCGGAGGAGCAGGCCGTACGCCGCCGGCGCGGTGGGGGTGGGCCCTCACGGCGCTGCAGACCGTGTTCCCCGTGCTGCAGTGGGGGAGGACCTACAACTTCAAGTTGTTCAGGAGTGACGTCATGGCAGGCCTCACTCTTGCCAGCCTTGGAATTCCTCAGAGCATTGGATACGCCAATTTGGCCAAGCTGGACCCTCAGTATGGTCTTTACACGAGCGTGGTGCCGCCGCTGATCTACGCCGTCATGGGGACGTCGCGGGAGATCGCCATCGGCCCCGTCGCCGTCGTCTCGCTGCTGCTGTCGTCCATGGTCTCCAAGATCGTCGACCCGGCCGTCGATCCGGTCACCTACCGCGCCCTCGTCTTCACCGTCACCTTCCTCGCCGGCGTCTTCCAGGTCTCCTTCGGCTTGTTCAGGTTGGGTTTCCTGGTGGATTTCCTGTCGCACGCGGCGATCGTTGGGTTCATGGCAGGAGCGGCGATCGTGATCGGGCTGCAGCAGCTGAAGGGATTGCTTGGGCTGAGCCATTTCACCAACAGCACCGACGTCGTCTCCGTCATCAAGGCTGTCTGCTCTGCACTCCGAGACCCGTGGCACCCCGGCAACTTCTTGATCGGATGCTCATTCCTCATCTTCATCCTCGCCACGCGATTCATTGGGAGGAGGTACAAGAAGCTGTTCTGGCTGTCGGCCATCTCGCCGCTGCTGTCCGTCATCCTGTCCACCGCCGCCGTGTACGCGACGAGGGCCGACAAGCACGGCGTCAAGATCATCCAGCGGGTGCACGCCGGCCTCAACCCGAGCTCCGCCAGCCAGCTTCGCCTCAGCGGGCCGTACACCGTCGACTGCGCCAAGACCGCCATCATCTGCGCCGTCATCGCCCTCACGGAAGCCATTGCTGTTGGACGATCATTCGCGTCGATAAGAGGGTACAAACTCGACGGGAACAAGGAGATGATCGCCATGGGATGCTCAAATGTGGCCGGATCTCTCTCCTCGTGCTACGTTGCAACAGGCTCATTTTCACGAACAGCCGTCAACTTCAGCGCCGGCGCGAGGTCAACCGTGTCCAACATCGTCATGTCCATCACGGTGTTCATCGCGCTGGAGCTGCTCATGAAGTCGCTCTACTACACACCCATAGCCGTGCTGGCCTCCATCATTTTGTCGGCACTTCCAGGCCTGATCGACATCAAGGAGGCTCTCAGCATCTGGAAGGTCGACAAGATGGATTTCCTCACATGCCTCGGCGCGTTCGTCGGCGTGCTCTTCGGATCAGTCGAGATCGGCCTCGCCGTATCGCTCGCCATCTCCTTTGCCAAGATCATCATACAGTCAATCCGGCCTCAGGTAGAGGTTCTTGGTAGGCTTCAGGGGACAAACATCTTCTGCAGCATCAGACAGTACCCTGTTGCTTGCCGGATTCCGAGTGTATTGACAATTCGGATTGATACATCATTCCTGTGCTTCATCAACTCCACTTTCATCAAAGAAAGGATCATCGAATGGATACGAGAAGAAGTCGAGACGTCTGATGAGAAGGCCAGGGAGAGGGTGCAATCTGTTGTCCTTGACATGTCAAATGTGGTAAACATTGACACTTCAGGGATTTCGGCCTTGGAAGAGATACACAAGGAGCTGGCATCTCTTAGCATACAGATGGCCATTGCCGGCCCAGGATGGCAAGCGATCCAGAAGATGAAATTGGCAGGTGTGGTTGACCAGGTAGGAGGAGACTGGATATTTTTGACAGTAGGTGAAGCGGTTGAAGCCTGTGTAACTATGCAAAAGGGCACTGCTCTGGAATGCTAA</cdnaseq>

Protein Sequence

<aaseq>MEDTAAAVETPVTVSTFGVSRHPDTARLVLSSPKPPGVREEFVGVVRKAFRPRASGGGGAGRTPPARWGWALTALQTVFPVLQWGRTYNFKLFRSDVMAGLTLASLGIPQSIGYANLAKLDPQYGLYTSVVPPLIYAVMGTSREIAIGPVAVVSLLLSSMVSKIVDPAVDPVTYRALVFTVTFLAGVFQVSFGLFRLGFLVDFLSHAAIVGFMAGAAIVIGLQQLKGLLGLSHFTNSTDVVSVIKAVCSALRDPWHPGNFLIGCSFLIFILATRFIGRRYKKLFWLSAISPLLSVILSTAAVYATRADKHGVKIIQRVHAGLNPSSASQLRLSGPYTVDCAKTAIICAVIALTEAIAVGRSFASIRGYKLDGNKEMIAMGCSNVAGSLSSCYVATGSFSRTAVNFSAGARSTVSNIVMSITVFIALELLMKSLYYTPIAVLASIILSALPGLIDIKEALSIWKVDKMDFLTCLGAFVGVLFGSVEIGLAVSLAISFAKIIIQSIRPQVEVLGRLQGTNIFCSIRQYPVACRIPSVLTIRIDTSFLCFINSTFIKERIIEWIREEVETSDEKARERVQSVVLDMSNVVNIDTSGISALEEIHKELASLSIQMAIAGPGWQAIQKMKLAGVVDQVGGDWIFLTVGEAVEACVTMQKGTALEC</aaseq>

Gene Sequence

<dnaseqindica>1..330#646..694#809..1016#1105..1279#2543..2608#2774..3004#3245..3371#3475..3761#3870..4063#4145..4230#4338..4414#4513..4665#ATGGAGGACACGGCGGCGGCGGTCGAGACGCCGGTGACGGTGTCCACATTCGGTGTATCCAGGCACCCGGACACGGCCAGGCTCGTGCTGAGCAGCCCCAAGCCGCCAGGCGTGCGCGAGGAGTTCGTCGGCGTCGTCCGCAAGGCGTTCCGGCCGCGGGCGAGCGGCGGCGGAGGAGCAGGCCGTACGCCGCCGGCGCGGTGGGGGTGGGCCCTCACGGCGCTGCAGACCGTGTTCCCCGTGCTGCAGTGGGGGAGGACCTACAACTTCAAGTTGTTCAGGAGTGACGTCATGGCAGGCCTCACTCTTGCCAGCCTTGGAATTCCTCAGGTACGTAGTAACTTTTATTATTTTTTTTATACCCTTCCCATAATACTGTAGCAGTAACCAGCATAACAGAAAAGCAACTGCAAACAGATTTTGTCTTGACACCATTAATGATTTCTACAGCATCAAAAACTTGGAGTCTGAAAAATCATGATAGATGTAGACGATTTGTAAAGAAAAAAAAAGAAGTAAAAAACAGAAGAACATTGGAGCAGAGCATGCATAGTTTTTGCCTAGAAATAGTGAGATGGGGATTGGGGAGAGCTGTCTCGTTCTTATCTGACATATGCTATCCCTTGGATATGATCCATCCTGCAGAGCATTGGATACGCCAATTTGGCCAAGCTGGACCCTCAGTATGGTCTTTGTAAGCATCAATACTTCAGCTTCGTTGCACAAAAACAACTCAATTTTCTCCTCATTTTTCCTGAACGATTCTTGCATCATATTTTTTGCTATTTGCTATGTGGCCATCGTCAAGACACGAGCGTGGTGCCGCCGCTGATCTACGCCGTCATGGGGACGTCGCGGGAGATCGCCATCGGCCCCGTCGCCGTCGTCTCGCTGCTGCTGTCGTCCATGGTCTCCAAGATCGTCGACCCGGCCGTCGATCCGGTCACCTACCGCGCCCTCGTCTTCACCGTCACCTTCCTCGCCGGCGTCTTCCAGGTCTCCTTCGGCTTGTTCAGGTACAACGACGAACACCAACCTCTCTGTATACCACTCCAGTTGCTATACTTGTTCAGGCTACCAACGATCGTTTTTGCTACGCCGCAGGTTGGGTTTCCTGGTGGATTTCCTGTCGCACGCGGCGATCGTTGGGTTCATGGCAGGAGCGGCGATCGTGATCGGGCTGCAGCAGCTGAAGGGATTGCTTGGGCTGAGCCATTTCACCAACAGCACCGACGTCGTCTCCGTCATCAAGGCTGTCTGCTCTGCACTCCGAGACCCGGTGAGCCTCCAGACTCCAGTAGAACAGAATCATTTACTACAGTTAAGCCGAACAAGAACAAAGACAAATAGATGCACAGTGATGAAATAATCGTCCATGGAGAATGAACGATCGACTAAAGTGTAGGGACATACAACGACGGCATGGACATGCACACATCGCTCTCGACATTATTTGTCTGCTTATTTTTGTCATGACTCGGTTGTTAGTTTCTTCTCATCTGCATTTCAAAGGCTCCTAGAAAATTAACCTGTTTACTGAATGCTACCTGAAAAGAAATGGCGTCCCTTTCGTTGTTACAACCGATATGATTGGACAAAAGACTCGGGGCTTATTAGTTGTTCTTTTGTGCATTATTATAGTCTGGATATTGGTTGGGAGGGACAAGTTGGTTTTCAGTAGTCTCCCCGTGATATGCAGGGAGGTCAGAGGTGCACGCATCACAAACGAGCAACCCTTTCTGGGTTGGATATTTTTTTGTCGAATCCTTAAACCAATTTTGTAGTTTTCAGTGCCTGGATTGACTGAACATAGTAAAATGAGATAAATAAAGACAACAATTAGCACCTAATCCCAGCTCAATCAATTTGGTGTATCGTCCTGAACTACTACTAATAGTTATATATATTATATAATGATCCTAGAAAAGATCGTCGGATGTTGCATAGGTTGTTGGTATTCAGTAGTCGGTACCAGGGTTTACCTTACCGCGCGGTTACCGGTGGTTACTGTGGTTACCAGGCTTATCGCGGGGGTACGGTAATATAAATACCGCGGTAACCTCCTCAAATTCAAATAAATTTTAAAAATAATTTGAATTTTTGATAAATTTTGCACGGTTTTACACGGTTTTTCACGGTTACCGCGGTTACCGCGCGGTAACCGTGCTTACCGCCGGGGCGCGATAACCCCGACCCCGGTGGTTTAGGAAACCTGGTCGGTACACGATTGAGCAAAGAGAATTTATGAGCAAAACCAGAAGCCTAGAAACAATCAAACTCGAGTACTTGGAATGAATATGCAACTTGACAGTACAGAATAATCAGGCTTCAGTGGATGAAGAACAAGACCACATGCGTGCACTGTTTACTATTTGGATACTACTTAATGGACAAACATAGCGCGTGCCTTTATGTCAACCCCCCACCGCTTATGCTCGGCTCAACTGTTGTCTGAATATATTCAGACAAAGAAGAAAATAAAAGATGAACTGCTGTATCTAATATTCTAATGTGCTCTCTCTTTTATCTAATGGCATTGCAGTGGCACCCCGGCAACTTCTTGATCGGATGCTCATTCCTCATCTTCATCCTCGCCACGCGATTCATTGTAAGAACAATCAATTAATCAAACCAAATATCTCTTCCGATCCAATTGCTGTTTAAGAGAAAAGAAACATATCTTAATCTTCCCATGATCTGATGATCATCAGAGGATCGAGCACACATGCATGTTAGTTAACACATGAAACGGGTTTGCAAAATGTGGCCACAGGGGAGGAGGTACAAGAAGCTGTTCTGGCTGTCGGCCATCTCGCCGCTGCTGTCCGTCATCCTGTCCACCGCCGCCGTGTACGCGACGAGGGCCGACAAGCACGGCGTCAAGATCATCCAGCGGGTGCACGCCGGCCTCAACCCGAGCTCCGCCAGCCAGCTTCGCCTCAGCGGGCCGTACACCGTCGACTGCGCCAAGACCGCCATCATCTGCGCCGTCATCGCCCTCACGGTAAGTAGCAGTAAAATTCTTCAGTTACCATCAGGGCGTTCTATGGGCCTGTTCGTGGGCTTATCTGGGCCTGAAAAGGCTTCAGCCCAAAATGTAAGCCCAAGGTCCAAAAAAAATTTGGGCCTCAGATGGGCCTTCTGGCCCATGAACAGGTCATTATAGTAAAGAGAAGAAAAAAAAATTGAAAAGAAGAAATGAAGATGCACTGATTTATTAACATTCTTGTGTTACCTTTTGCAGGAAGCCATTGCTGTTGGACGATCATTCGCGTCGATAAGAGGGTACAAACTCGACGGGAACAAGGAGATGATCGCCATGGGATGCTCAAATGTGGCCGGATCTCTCTCCTCGTGCTACGTTGCAACAGGTGATCACAATTACAGCTACCTATATGCAGTCTTCTGAAGAAGAATCAAATCAAATCAAATCAATACTGCTGGTGTCTGACAGACGTCAACAAAATTTTTCAGGCTCATTTTCACGAACAGCCGTCAACTTCAGCGCCGGCGCGAGGTCAACCGTGTCCAACATCGTCATGTCCATCACGGTGTTCATCGCGCTGGAGCTGCTCATGAAGTCGCTCTACTACACACCCATAGCCGTGCTGGCCTCCATCATTTTGTCGGCACTTCCAGGCCTGATCGACATCAAGGAGGCTCTCAGCATCTGGAAGGTCGACAAGATGGATTTCCTCACATGCCTCGGCGCGTTCGTCGGCGTGCTCTTCGGATCAGTCGAGATCGGCCTCGCCGTATCGGTAAGATCAATGCCGGATGGATCGTAGATGCAGCTTGGTTTCGAGTCGAAATTTGTGCAAATTTTATGTCAGTTGTATGACTTGGTATGGATCGATCGCTCAATGCAGCTCGCCATCTCCTTTGCCAAGATCATCATACAGTCAATCCGGCCTCAGGTAGAGGTTCTTGGTAGGCTTCAGGGGACAAACATCTTCTGCAGCATCAGACAGTACCCTGTTGCTTGCCGGATTCCGAGTGTATTGACAATTCGGATTGATACATCATTCCTGTGCTTCATCAACTCCACTTTCATCAAAGAAAGGTAGGAATGGTCAATCTCATAAAATTTATATGAGTTTGTAATGTTTGAGTAGGAATGCTCAAATATGTGTTCTTCATTCAGGATCATCGAATGGATACGAGAAGAAGTCGAGACGTCTGATGAGAAGGCCAGGGAGAGGGTGCAATCTGTTGTCCTTGACATGTCAAGTCAGTACAAATTACAAAACACAAATAACTTCACCATTTTCTAACGAAAACTGGTGCTACTGAACAATTCAGAAAAAGAAAATCTGACCCATCTTTCTGATTTGCAGATGTGGTAAACATTGACACTTCAGGGATTTCGGCCTTGGAAGAGATACACAAGGAGCTGGCATCTCTTAGCATACAGGTGAAGTAGTTGACTGATGGATATAAGTACTAGCTCCCAAAATTTCCTAGTAAAATGCTCTCGTTCTTGTGCTGAAACACCTCTCTGCTGCTCTGCAGATGGCCATTGCCGGCCCAGGATGGCAAGCGATCCAGAAGATGAAATTGGCAGGTGTGGTTGACCAGGTAGGAGGAGACTGGATATTTTTGACAGTAGGTGAAGCGGTTGAAGCCTGTGTAACTATGCAAAAGGGCACTGCTCTGGAATGCTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA011286

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA011286&oldid=56109"