BGIOSGA011306

From RiceWiki
Revision as of 09:29, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA011306| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA011306, complete gene.| tag = OS03G01...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA011306

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA011306, complete gene.

LocusTag

OS03G0190100

Ensembl Transcript ID

BGIOSGA011306-TA

Ensembl Protein ID

BGIOSGA011306-PA

Length

3117

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:5108473..5111589

Sequence Coding Region

5111338..5111589,5111051..5111154),complement(5110871..5110942,5110617..5110755),complement(5110319..5110434
,5110116..5110215),complement(5109988..5110026,5109762..5109872),complement(5109602..5109667
,5108473..5108514

Genome Context

<gbrowseImage1> name=IndicaChromosome03:5108473..5111589 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:5108473..5111589 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCCGCTCGCCGGCATCGCCCTCGCGCCTCTCCTCGTCTCCCACCTCGCGCCTCCACATCATCGCCGCAGCAGCGTTGCTTCCGCCGCCGCCGCCGCCGCGAGAAGGAGGCCGCGCGCGGTTCAGTGCTCCGCTACCGCTACTGCCGCGTCCGGTGAAGGCGCAGGTGACGACGTTGAGCTCTCCCGAGGGACGCTGCTCTGGAGGGCGGCAAAGCTGCCAATCTACTCCGTGGCGCTTGTGCCACTCACGGTTGGAAGCGCCTGTGCTTACCATCATGTGGGTTCATTCTTTGGTAAACGGTATTTTGTTCTCTTGGTTGCATCAGTCCTTGTGATCACTTGGCTCAATCTAAGCAATGATGTTTACGATTCAGATACTGGGGCTGATAAGAACAAGAAGGAATCTGTTGTTAACATCGTTGGCAGTCGAACGATGACGCAATATGCTGCAAATATTTCTCTCCTGTTCGGATTTATGGGGCTATTTTGGGCCTTTGCCCAAGCTGGGGATGCCAGGTTCATTTTATCGGTAACCTGTGCAATCATCTGTGGCTATGTTTATCAGTGCCCACCATTCCGACTAAGTTACAGGGGACTAGGTGAACCATTATGTTTTGCTGCATTTGGTCCATTGGCAACCACAGCTTTCTACTTCTCAAACAGCAGCAGAAACATTTCCAGCGGAACAGCTCTTCTCCCTCTCAGTAAAACAGTCATTGCTTCATCCATTCTAGTTGGGCTGACGACTACCCTGATACTCTTCTGCAGCCATTTTCATCAGATTGATGGAGATCGTGCTGTTGGGAAAATGTCTCCCCTGGTAAGAATTGGCACCAAAACAGGATCAAGATTAGTGACTCTTGGGGTTGTCACGCTTTATGTTCTTTTGGCTGCTTTTGGCATGAGCAAATCTCTTCCATCAGCTTGCACTGTCCTTTGTGCCTTGACACTCCCTGTGGGCAAATGGGTTGTGGACTATGTGCTGAAAAACCATGAAGTTACTTCAGATCTGACATACAATTTGGATGCAAACCTGTAG</cdnaseq>

Protein Sequence

<aaseq>MPLAGIALAPLLVSHLAPPHHRRSSVASAAAAAARRRPRAVQCSATATAASGEGAGDDVELSRGTLLWRAAKLPIYSVALVPLTVGSACAYHHVGSFFGKRYFVLLVASVLVITWLNLSNDVYDSDTGADKNKKESVVNIVGSRTMTQYAANISLLFGFMGLFWAFAQAGDARFILSVTCAIICGYVYQCPPFRLSYRGLGEPLCFAAFGPLATTAFYFSNSSRNISSGTALLPLSKTVIASSILVGLTTTLILFCSHFHQIDGDRAVGKMSPLVRIGTKTGSRLVTLGVVTLYVLLAAFGMSKSLPSACTVLCALTLPVGKWVVDYVLKNHEVTSDLTYNLDANL</aaseq>

Gene Sequence

<dnaseqindica>1..252#436..539#648..719#835..973#1156..1271#1375..1474#1564..1602#1718..1828#1923..1988#3076..3117#ATGCCGCTCGCCGGCATCGCCCTCGCGCCTCTCCTCGTCTCCCACCTCGCGCCTCCACATCATCGCCGCAGCAGCGTTGCTTCCGCCGCCGCCGCCGCCGCGAGAAGGAGGCCGCGCGCGGTTCAGTGCTCCGCTACCGCTACTGCCGCGTCCGGTGAAGGCGCAGGTGACGACGTTGAGCTCTCCCGAGGGACGCTGCTCTGGAGGGCGGCAAAGCTGCCAATCTACTCCGTGGCGCTTGTGCCACTCACGGTGAGTAATTTTACTGTCGACTTGTGAGACACACTTTGCAGCGGCATATTGGTGAAGCTTCGTTCAATCCGTCTATCCATGCCACATAATTTGCTACTCTATTCCTTGATGAAAAAGACCATTGTGTTCATCAAAATATATTCCTGCAAAGTGTGCGATAAAAATATTTCGCTTACCCTGCAGGTTGGAAGCGCCTGTGCTTACCATCATGTGGGTTCATTCTTTGGTAAACGGTATTTTGTTCTCTTGGTTGCATCAGTCCTTGTGATCACTTGGCTCAATCTAAGGTAGGGCACACTAACAAGGATAAACAAAAGCTAACATGGGAATCACTATTGATCCATTGTTACGTTTTATCATGCTCACTTGTTCCTGAGAGTTTGATTTCATTGCAGCAATGATGTTTACGATTCAGATACTGGGGCTGATAAGAACAAGAAGGAATCTGTTGTTAACATCGTTGGCAGGTACTGCTAATACCAAGCAATAATGCAACTACTATGCAAGCTTTTGTTTTTTAAAAATAGTTTGCAACCATTGTTTTAGAAGTGAAAACATGTTACATCGTAATGCACTCTGCAGTCGAACGATGACGCAATATGCTGCAAATATTTCTCTCCTGTTCGGATTTATGGGGCTATTTTGGGCCTTTGCCCAAGCTGGGGATGCCAGGTTCATTTTATCGGTAACCTGTGCAATCATCTGTGGCTATGTTTATCAGGTAAATTTTTCTACCCTTTTTCGGAGGAATCATCATGAACTCTAGCACATAAAAAATGTGCCATTTTGCAAGAAGCTATCTACTAACAGCTAAAGCTGAAGCATTTTAGCAGTTCACTATGTTTCACCTCGATTTCTTCAATATCTCAGACATTTCTTCTTTTGTATTTTCTCTTTGTGTAGTGCCCACCATTCCGACTAAGTTACAGGGGACTAGGTGAACCATTATGTTTTGCTGCATTTGGTCCATTGGCAACCACAGCTTTCTACTTCTCAAACAGCAGCAGAAACATTTCCAGGTATCCTCTAAAGCAAGAAGGTTCCCACTATTACTTTCACTTCCAAGGGGATATAATGGCCATTTGCACCTACATTATTTGTCTTGAGATGCTTCAATTACAGCGGAACAGCTCTTCTCCCTCTCAGTAAAACAGTCATTGCTTCATCCATTCTAGTTGGGCTGACGACTACCCTGATACTCTTCTGCAGCCATTTTCATCAGGTATAATTCCTTTGGCATAATTTAGCAATGTGCTGTGATGACTATGAATATTATTGTTGTTGTCAGTGATGGAGTCTGATATTTTGTAGATTGATGGAGATCGTGCTGTTGGGAAAATGTCTCCCCTGGTAATTTTCTCTATTTATGATTATGACCAACGCCTAAAGTTAGCTTTAGCATTTCACTTGTGCAGCTTTGAAAAAAAAAATCGTTTACCTCTCGTATGTTTGAACCTACAAACAGGTAAGAATTGGCACCAAAACAGGATCAAGATTAGTGACTCTTGGGGTTGTCACGCTTTATGTTCTTTTGGCTGCTTTTGGCATGAGCAAATCTCTTCCATCAGCTTGCACTGTGAGCCAATGTTCCTTACTGCTTCATGTTGAGATACCGATCCCAAACCAGTTCTTACTTTCTAAACTCAACCATTACTTCTATTGTATTTCAGGTCCTTTGTGCCTTGACACTCCCTGTGGGCAAATGGGTTGTGGACTATGTGCTGAAAAACCATGAAGTAAGTCTCTCATACCACTCTCCCATTTATTTTTTTTAAAAAAAAACTGTCCCCATTTCGGTATCACCTTATAAGGTTGACATTACAATTTCAGGACAACAGCAAGATTTTCATGGCAAAGTATTACTGTGTTCGGCTACATGCTCTGTTTGGGATGGCACTGGCTTCTGGTTTAGTCTTGGCTAGAAATGGCACACTGGTCTGACAGACGACCAACCTTGACATCCTTGTGAAGACCCAGAGCAGACCGCCGTCTTGCAGTTTCAGACTGAGTAACTCCAGTAGCTGTTTGGTTCCAGAGCAAGCTTGAACGACGAGTGCAATGGCAGTGCAATTGTGCAGCCATTTGGCAGCTAGATTGGGTAGGCAGAGCGAATCAGAGAAAGAAGCACAGGTTTGGAAGCACTGCCAGCCAAGGCAGTGGAGAGTGTAGAGGATGGTAAATTGCCTGAAACCGGAATGAATGGAGAGGTACTTGAGTTGTTGGCTACAGAATCCCAGTCATTTATCTCCATGAGAAAAAAAGCCCAGCTATGCATTTCTTCCCATCGCAGTAAAGATTGCCGTTGCACAGGAGGCTCCCAGTGTGAATTGATTTTCATGCCGGGACAGATAGGACATGTCATGTTCTACCATTACTTCTTCCTCCCAAGCACCAACAGCTATTTGGTAGTACACCACTCATCTGGGCAGTTTCGCATGTGCCTGGCTCTGTTCGTTTCCTGGAGTTCCCAACTCCCCCGTCTCATTTTCCGCGCGCACGCTTTTCAAACTGCTAAACGGTGTGTTTTTTGCAAAAAGTTTATATACGAAAGTTGCTTAAAAAAATTATATTGATCCATTTTTGAAAAAAAAAATTAGCAAATAATTAATTAATCATGTGCTAATGGACTGCTTCGTTTTTCGTACCGGAGGGATGGGTTCCCAACTCAACCAAAAGAACAGAGCCTTAACACTTCTAGTTTCCTGGCTAGTGATTTGTGATCTTACTTTTACAGATTTTCTGAGTTTATGGGTGGGAGATGAGTTGGTTCATGATTTTTTTTCTCTGTTTTTAAACTCATGAATTCCTTAATTCTAAAAACAGGTTACTTCAGATCTGACATACAATTTGGATGCAAACCTGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA011306