Os12g0288900

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Revision as of 10:28, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0288900| Description = Conserved hypothetical protein| Version = NM_001073127.1 GI:115488215 GeneID:4352004| Length = 2115 bp| Definition ...")
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Gene Name

Os12g0288900

Description

Conserved hypothetical protein

Version

NM_001073127.1 GI:115488215 GeneID:4352004

Length

2115 bp

Definition

Oryza sativa Japonica Group Os12g0288900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:11080583..11082697

Sequence Coding Region

11080583..11080717,11081468..11081551,11081659..11081796,11082025..11082149,11082565..11082697

Expression

GEO Profiles:Os12g0288900

Genome Context

<gbrowseImage1> name=NC_008405:11080583..11082697 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:11080583..11082697 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtctgggatggacggcagcggtgtgccagaaaccgccggagtggaggcagcctccagctcagatgcccgcggggacaaccgacacatgccgtctgaggactgtgtcgccggcatcaactcggctctccaacatccgacggtgcggttcctgagggagcaaatggagaaggccggttgcccagtgctaccgcggatgatcagggcgatgaactgcatgtctaccaatcacaatggttcctacggtagcgggctggggataactgtgtgctgtgatcacatgcggtctcaagatgagataaatcagctattaattcatgaattaatacatgcctatgatgactgtgttgtcaagaacatggattggaagaactgtgctcaccatgcttgctctgagattcgagctaatcaccttagtggtgactgccattataaacgtgaattgttgcgtggcttcatgaagataagggggcacgagcaagaatgtgttaaaaggcgggctctcatgtctgtcaagaacaacccgtactgctcagggacagctgcaaaagatgcagttgagtctgtgtgggatatatgctacaatgatacacgcccatttgatagggttccatga</cdnaseq>

Protein Sequence

<aaseq>MSGMDGSGVPETAGVEAASSSDARGDNRHMPSEDCVAGINSALQ HPTVRFLREQMEKAGCPVLPRMIRAMNCMSTNHNGSYGSGLGITVCCDHMRSQDEINQ LLIHELIHAYDDCVVKNMDWKNCAHHACSEIRANHLSGDCHYKRELLRGFMKIRGHEQ ECVKRRALMSVKNNPYCSGTAAKDAVESVWDICYNDTRPFDRVP</aaseq>

Gene Sequence

<dnaseqindica>1981..2115#1147..1230#902..1039#549..673#1..133#atgtctgggatggacggcagcggtgtgccagaaaccgccggagtggaggcagcctccagctcagatgcccgcggggacaaccgacacatgccgtctgaggactgtgtcgccggcatcaactcggctctccaacgtatgagcgtgtcaaagtatatgtgtttgccatggcattgtgtttagtttggggaggaggcgggatgggtaggactcatccctgcttttaaggatgggatggtcccacctgtctgtttggcatgagggataagatgatcctacttttcaagggacggctcacatgtcagcgagagaaaaaaatgggttggatcaaaaaaaatgggttgaattggtctgccagttttttaagggtcaggccaacccggatctgaggggaatattccctgtcagggtccatctcatcccacctgtcccaaaaccaaacaccctgaaaaatgggttcaacccaacctgatccatccaaaccctacaaccaaatgcatgctaaggttttttttttctttgaagatttccttatttgcgttgtgaaccagatccgacggtgcggttcctgagggagcaaatggagaaggccggttgcccagtgctaccgcggatgatcagggcgatgaactgcatgtctaccaatcacaatggttcctacggtagcgggctgggggtatgtgactctttccccttcattttgtccttccaaacaatcaaggtgtggcaccgacgagactttgttctggcaatttgcattgcggatatggtttggatctaggaagtgtgtatacatgtttgtgtttggtatggtggttgcgaagtgtgtttttgccttaaattgtttccttcagttgtttggtatcgagaatactgtcctgattttgcaattatttatgtccagataactgtgtgctgtgatcacatgcggtctcaagatgagataaatcagctattaattcatgaattaatacatgcctatgatgactgtgttgtcaagaacatggattggaagaactgtgctcaccatgcttgctctgaggtaacaaaatacttaacatgtaagctggagttatcggctatttggcatgctagcattaagtacaaacctttacattgataattgacagtgcatttttttgttgttagattcgagctaatcaccttagtggtgactgccattataaacgtgaattgttgcgtggcttcatgaagataagggggcacgagcaagtaagtattttcactgtcttactgttgagcttgtgccacctatgaggctatgacattggttctttagactttacatgtcaagctcggtatggtgtccttttctgctcttaatcttgcacatgcaacacacgttttccacattattcttagctgctctatcattttgcggactcaaatggcaaagcacatgcgtataatatcaaaatctaacatactaaaaatcagttatgcaaatgacttgagtggattaaaagaagttagtgccttagcggtgttgacagttaacacaatgcgaacgagctcatggcttgttggtagctcttgtggctattgccatgctacccgcccatgctcgatccctggatcgagcagcggatgtcacaccgggtgattttcccatgtgacctctgggttgagtcccagatggttagggtacatacatgcttgcacattcagtggtactgcatgtttcccgtgcacctaaggctataggtcttccaagtttctggcttaaagtgtgtgttgtacttgcacgcgtgtggagttgcatgggtgtggtgtgcatcctcaaatataccctaaaaaaaatattgttgtgttgtgttatgaaatgagattctaaaatggacttgattttaagtgaacttaatcttttttttcctttttctgcgacttgtgctatatgtgtatatgctttgctaaaccctctatgaatttatgtacgttctgacattttctgcatttctgaaggaatgtgttaaaaggcgggctctcatgtctgtcaagaacaacccgtactgctcagggacagctgcaaaagatgcagttgagtctgtgtgggatatatgctacaatgatacacgcccatttgatagggttccatga</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0288900, RefSeq:Os12g0288900