BGIOSGA011308

From RiceWiki
Revision as of 09:29, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA011308| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA011308, complete gene.| tag = OS03G01...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA011308

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA011308, complete gene.

LocusTag

OS03G0189600

Ensembl Transcript ID

BGIOSGA011308-TA

Ensembl Protein ID

BGIOSGA011308-PA

Length

2445

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:5092741..5095185

Sequence Coding Region

5095149..5095185,5094900..5095033),complement(5094780..5094823,5094357..5094682),complement(5093745..5093827
,5093582..5093657),complement(5093426..5093490,5093235..5093330),complement(5092964..5093125
,5092741..5092857

Genome Context

<gbrowseImage1> name=IndicaChromosome03:5092741..5095185 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:5092741..5095185 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAAGATCAGAGCCTGAAGCCCATCCGTTGCAAAGCGGCGGTCTGTAGAGCGGCCAGTGAGCCACTGATCGTCGAGGAGATCGTCGTCGATCCTCCGAAAGCCTACGAGATCCGCATCAAGATCATCTGCACCTCCCTGTGCCACACCGATGTCACCCTCTGGCACAAGGTAGACCCTGCATTTCCAAGAATCTTGGGCCACGAGGCCTACGGGGTGGTGGAGAGCGTGGGGGAGAACGTGGAGGGGTTCGCGGCGGGGGACACGGTGGTGCCGACGTTCATGGGGCAGTGCGACTCGTGCGCCAGCTGCGCGGCGGAGTGGACGAACCAGTGCACCGCCGTGCCGTTCACCATGGGCCCCGGGATGCGGCGCGACGGCACAACCAGGTTCTGGGACGGCGAAGGGAAGCCGCTCAGCGACACGGTGGCCGTCACCAGCTTCAGCCAGTACACCGTCGTCGACGTCAACCAGGTCGTCAAGGTCGACACCGCCGTGCCGCCCAAAATCGCCTGCCTCCTCGGCTGCTGCGGCGGCACCGGGGTAGGAGCAGCATGGAGGTTGGCCAAAGTGCAACCCGGTTCGTCGGTGGTTGTCTTCGGGCTGGGATCCGTCGGATTGGCGGTAGTGCAAGGGGCAAAAATGTGTGGAGCAACGAAGATTATCGGTGTTGATTTGAATCCTAACAAAGAGGAAGTTGGAAAAGAGTTCGGTGTGACTGATTTCGTCAATCCATCCCAACTCGGCGACAAATCCGTCAGTGAGGTGATCAATGCGATGACAGACGGTGGCGCTGACTACAGCTTCGAGTGCATCGGTATCTCGTCGGTGATGTCTGAGGCAGTCAGAAGCACCAAATCAGGACGGGGCAAGACGATCATTCTGGGGGTCGAGAAGGACAGCCAGCCGTTGTGCCTGCCGTCCTTCGAGTTTCTGTTCGGCAAGTGCGTCATGGGATCGCTCTTCGGTGGGGCCAAACCCAAAACTGACATCCCAATCCTCGCCGAGAAATGCATGAACAAGGAGCTGGAACTGGAGAAGCTGGTCACTCATGAGGTAGGCCTGACGGAGATAAACACAGCCTTCAATTTGCTTCTGCAGGGAAAGAGCCTGAGATGCATCATATGGATGGACAAGTGA</cdnaseq>

Protein Sequence

<aaseq>MEDQSLKPIRCKAAVCRAASEPLIVEEIVVDPPKAYEIRIKIICTSLCHTDVTLWHKVDPAFPRILGHEAYGVVESVGENVEGFAAGDTVVPTFMGQCDSCASCAAEWTNQCTAVPFTMGPGMRRDGTTRFWDGEGKPLSDTVAVTSFSQYTVVDVNQVVKVDTAVPPKIACLLGCCGGTGVGAAWRLAKVQPGSSVVVFGLGSVGLAVVQGAKMCGATKIIGVDLNPNKEEVGKEFGVTDFVNPSQLGDKSVSEVINAMTDGGADYSFECIGISSVMSEAVRSTKSGRGKTIILGVEKDSQPLCLPSFEFLFGKCVMGSLFGGAKPKTDIPILAEKCMNKELELEKLVTHEVGLTEINTAFNLLLQGKSLRCIIWMDK</aaseq>

Gene Sequence

<dnaseqindica>1..37#153..286#363..406#504..829#1359..1441#1529..1604#1696..1760#1856..1951#2061..2222#2329..2445#ATGGAAGATCAGAGCCTGAAGCCCATCCGTTGCAAAGGTACACAATTCACTTACAGAGATCAGATCTGCATAGCTCCTTGGTACTACTACTACTACTACTCAATTCCTCACGCATGATATATGATTGATACATATCGACGACGACGATGCAGCGGCGGTCTGTAGAGCGGCCAGTGAGCCACTGATCGTCGAGGAGATCGTCGTCGATCCTCCGAAAGCCTACGAGATCCGCATCAAGATCATCTGCACCTCCCTGTGCCACACCGATGTCACCCTCTGGCACAAGGTATACGTACGTTCCCCCATCTGATCAAACCACGTGAAAGAATCACGTATAATTTGCTTTTATAATTTCATAATAGGTAGACCCTGCATTTCCAAGAATCTTGGGCCACGAGGCCTACGGGTATGTTCGTTCTTCCCTGATGCTTTAATTTTCCTCTTCGCCAATCCGAAAATTCGAATTCGAGAATCTCTAACTATATCTGTTTGTTTTTTTTAAGGGTGGTGGAGAGCGTGGGGGAGAACGTGGAGGGGTTCGCGGCGGGGGACACGGTGGTGCCGACGTTCATGGGGCAGTGCGACTCGTGCGCCAGCTGCGCGGCGGAGTGGACGAACCAGTGCACCGCCGTGCCGTTCACCATGGGCCCCGGGATGCGGCGCGACGGCACAACCAGGTTCTGGGACGGCGAAGGGAAGCCGCTCAGCGACACGGTGGCCGTCACCAGCTTCAGCCAGTACACCGTCGTCGACGTCAACCAGGTCGTCAAGGTCGACACCGCCGTGCCGCCCAAAATCGCCTGCCTCCTCGGCTGCTGCGGCGGCACCGGTGAGCCTGAGATTCGCAGATATATTGAACCTGCTTGGTAGAGCCAAATCAATCAAAACAGTTTCAACTTCACCTAAAATGGGTATGGAGTTGGATAGAACGTCTTTCACAAAATGAACTAGATATACGAAGCTTGGTTTAAACTATGAGATTTGCTCCGGTCAGTAAAAAGTATCTCGAGGTACTAGTATCTCACGGTACTAAATCGTTTCCGATCGTTTGATCTAGCTGGACAGGATGGGCATTGCTAGATCTAACGATTGAAAACGATTTGATACCGTGAGGTACTGGTACTTCGAGATTTTTTTTTTTGGACTGAAGCAAATCTGTTAAACTATTCTACAACTCCACTTCATAGGTCAGACTCAACTCCTGAAGCTAAATTTAGGATTTGAGTTTTACCAAACATTTCCATATTTTAGCACGCTACAAACGAATTGGGGGAGCCTGAGCCTGAAATGCCATTTGCCTGATTGCCTTACCTCTGAACTGTGCACTGACATTCATTGCATCATTGAATGTCGATCAGGGGTAGGAGCAGCATGGAGGTTGGCCAAAGTGCAACCCGGTTCGTCGGTGGTTGTCTTCGGGCTGGGATCCGTCGGATTGGCGGTAAGCTAGAGGTGAAGCAGTGTAATTTCTTACTCGGATACATGATGAGTTGACGACCGCTGCAAATATTTTGACTTTTTTTTCCAGGTAGTGCAAGGGGCAAAAATGTGTGGAGCAACGAAGATTATCGGTGTTGATTTGAATCCTAACAAAGAGGAAGTTGGCAAGTCCAAATTATTTTTCCTGTGTATAACACGCAGTGAAGAAGAATCTTTGCATTTTCTCACAACTGAAGAAACCTCTACTTTTTGCAGGAAAAGAGTTCGGTGTGACTGATTTCGTCAATCCATCCCAACTCGGCGACAAATCCGTCAGTGAGGTGAGGAAACACGCCATTTGGCACCACCCTACAGAAATCATCTGCTAATGGATCCAAACTCGTCAGTGCACGTTGTTAATTCTGTTCTATCCTAGGTGATCAATGCGATGACAGACGGTGGCGCTGACTACAGCTTCGAGTGCATCGGTATCTCGTCGGTGATGTCTGAGGCAGTCAGAAGCACCAAATCAGTTCTGATCTCACCACACTGATTCAGACATTCAGTGATCTAATAATCGCGTGTTAATAATTCAGAGGAGAATATTTGCAGCGGGAATTAATAATCGTGTGTTAATGCAGGGACGGGGCAAGACGATCATTCTGGGGGTCGAGAAGGACAGCCAGCCGTTGTGCCTGCCGTCCTTCGAGTTTCTGTTCGGCAAGTGCGTCATGGGATCGCTCTTCGGTGGGGCCAAACCCAAAACTGACATCCCAATCCTCGCCGAGAAATGCATGAACAAGGTTGCGTTTTTATAAATTCAGTTCGCGGTTTCAGTTTCAGACGAAACTAGACTCTTCCTAATTGTAATGCATGTGCTTTGTGTGTGTTGTGCAAATGCAAATGCAGGAGCTGGAACTGGAGAAGCTGGTCACTCATGAGGTAGGCCTGACGGAGATAAACACAGCCTTCAATTTGCTTCTGCAGGGAAAGAGCCTGAGATGCATCATATGGATGGACAAGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA011308