BGIOSGA011327

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Revision as of 09:29, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA011327| Description = Sap-like protein bp-73| Definition = Oryza sativa Indica Group BGIOSGA011327, complete gene.| tag = OS03G0183100| ti...")
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Gene Name

BGIOSGA011327

Description

Sap-like protein bp-73

Definition

Oryza sativa Indica Group BGIOSGA011327, complete gene.

LocusTag

OS03G0183100

Ensembl Transcript ID

BGIOSGA011327-TA

Ensembl Protein ID

BGIOSGA011327-PA

Length

5883

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:4756822..4762704

Sequence Coding Region

4762683..4762704,4759078..4760156),complement(4758425..4758562,4758263..4758336),complement(4757918..4758098
,4756822..4756926

Genome Context

<gbrowseImage1> name=IndicaChromosome03:4756822..4762704 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:4756822..4762704 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCTGCTTCCGCCGCATCCAGGCAGAACATTACCAGCCTATCATGGAGACAACAGATTTCTTCTTGGAGCTTGTTTCCTGAGTAAACTGCCTATGCTGCGCCCAATGAAGTTGTCTTTGGTATGCAGTGCTAATCCCAACAACCATAGGTCAAGAAGTTCGGATATCACACGCCATCAGAAGGGTGGATCAGCTCGGAGGAAAAGTAAGCCTTACCAGGAGAAAGATGACTCTGAGAATATTGATGAATTCGATACTGATATTATGTCCTCCAAAAATGGACCACCCATCTCTTTGACAAGCAATTCCCGTCCTCAAGCAACATCAGTCCCAGGGGAAAGAGAGAAGGAGATAGTAGAGTTGTTTAAAAGGGTTCAAGCACAATTGCGAGCAAGGGGGAAAGGGAAGGAGGAGAAGAAGCCTGAACAAGCAAAAGCACAGGGTGAGAGGGGCAGTGTTGACTCCCTTCTAAATCTGCTTAGGAAGCACTCAGTGGACCAACGAAGGAAGAGCGGTGATGAGAAAGAACAGAGTGTTGACCAAACAAAGAGAAGCAATGAATCTGGAAATAAACAAAATTCAAGCATCTTCATAAAGAATGACACTCAGGAAGAACAGAAAAAGCCACATCCTGCAGCCTTCAAAAGGCCAGCTTCAAATTTTAGGCGAAGATCCCCTGTTCCTAATGTAAAGTTCCAGCCTGTTACCAATGTTGATGCCGAACGAGTCATCAATAACATCAATGATGCCGTACAAGAGGCTAAGCCAACTTTGGAAAATAAGGCTGCTACAGATGAACCAGACTCGGTTTCTACATTCGAACCTAATTCTGTAATAGAACCAGAAAACCTATCTTTGGATGACCTTGATCATATTTCAGATGATGAACCTGATGCTTCTGATACTGATGAACCCAGTGGAGAATATGATGAGCCATCTTTGCAAATCCCAAGTGTTCCAATTATTGATGAATCTCATGATACGACTCTGAAATCTTCCTTAGGAGGTCCTGATTTAAGCACTTTGAAGGTCACAGAACTAAGAGAACTTGCGAAATCTCGAGGAATCAAAGGATATTCCAAGATGAAGAAGAATGACCTGAGCCAAGGTACTGATTGGGAGGATTTCCTGGGAATTGTCTGCCTCCCGATTATCAATTCAACAATCAGCTTCATTAAGGAAAACAATGCAGGCGATGCAGCTGCTGCACTCATGTCCCGGTTGGCGCTAAAAACAAAGGTTCTTAGAGATGAGCAGTGGCAAGAGCTTGATGCTTCCACATTGGTACCTGGGGGGGATATAATCAGCATCAGTCAGCTCTCACTGGTGAATCCCTTCCTGTCACCAAAAGAACCGGGGACCATAGTGTTCACTGGCTCAACATGCAAGCATGGTGAGATTGAAGCTGTTGTCATTGCAACTGGGATACACTCTTTCTTTGGCAAGGCAGCTCATCTAGTGGACTCCACTGAGGTTGTTGGGCATTTTCAGAAGATCATCAAGGGAGAGATTAGCAAGGACATTGATATAACCAGTAAATTTATTGTTCTGCAGATATCTGAGAAGAACGAGTATGGGATCACAGGCATATCACTCTAA</cdnaseq>

Protein Sequence

<aaseq>MLLPPHPGRTLPAYHGDNRFLLGACFLSKLPMLRPMKLSLVCSANPNNHRSRSSDITRHQKGGSARRKSKPYQEKDDSENIDEFDTDIMSSKNGPPISLTSNSRPQATSVPGEREKEIVELFKRVQAQLRARGKGKEEKKPEQAKAQGERGSVDSLLNLLRKHSVDQRRKSGDEKEQSVDQTKRSNESGNKQNSSIFIKNDTQEEQKKPHPAAFKRPASNFRRRSPVPNVKFQPVTNVDAERVINNINDAVQEAKPTLENKAATDEPDSVSTFEPNSVIEPENLSLDDLDHISDDEPDASDTDEPSGEYDEPSLQIPSVPIIDESHDTTLKSSLGGPDLSTLKVTELRELAKSRGIKGYSKMKKNDLSQGTDWEDFLGIVCLPIINSTISFIKENNAGDAAAALMSRLALKTKVLRDEQWQELDASTLVPGGDIISISQLSLVNPFLSPKEPGTIVFTGSTCKHGEIEAVVIATGIHSFFGKAAHLVDSTEVVGHFQKIIKGEISKDIDITSKFIVLQISEKNEYGITGISL</aaseq>

Gene Sequence

<dnaseqindica>1..22#2549..3627#4143..4280#4369..4442#4607..4787#5779..5883#ATGCTGCTTCCGCCGCATCCAGGTGAGCACATCCTCCGCCACCGCCGCCTGCGCCGATTCCCATCCATCCATCGCTAGAGCGAGCGAGCGGGGTCGCCGTCGTTTGTCCTGCTGCTTCCGCCGCATCCCTTACGACGCACATCCTCTCGTCTCATCTCCCTCTCTCCACCCACGCAATTTTTTTTCTCGAATTTGCGTTAATCCTAGCTTCGTTGTAGTAGAAATTTGCCTTAACCTTAATACTAACAAATGTTTGTTCCGAAAAAAGTTTGGGGTTGGGGGGGGGGGGGGGGGGGAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGGGGTTCAACTGAACCCCTATGTCCCATGTCAGATCCGCCACTGCTTTAATGTGTGTGGCGCATTGTCTCTTAGCTCTTTTAAGGAAAACTAACTATCGTTCTCTATGAAATCTGGCTCGCATTTTCTTTCAAAAAATCTGGCTCGCACGCACTGCTGGTGTAAATATGATGATACATTGTAAGAATGAAATATAGAGTTATTAAGTTTAGTTTCTTTAGCAAGTTATTAATGATTCATACACTGTTTATGAGTGTGCCATTTTACCCAGGTTTCCAAAGGCTGCTTGCTGGCACAGCTTGGAGAACGTATATGGTTAGAACAGTGAAAAAGGCTTTAAAACCAAATGAATTATTCTGTTTCCTGTCATTTCCTTTAAATATCACGCGATCCAAACTTCTAGCCCTAAGTGTGGTAAGAAATCACTGTAGGATGATGCATCCTCACAAGCCGTAGAGCAGCTTGGGAAAAACTGGAAATTTAAAACTGTCTTAGCTAAAGGAATTCTTGCTGTCCGCATATTACTTTCATGGTTAATTTGGTGTCAAATTACATGCTTATCAGCATTTTTAGTGCTATATGTCTGGAAGCACTATATACACAATGATAAATGAGGTAGGTAGTATAGGCTACTAGACCTCTTGTTGATGTCTAGTTCCATTTTGTCATGAATAGGAAATGCTAGTGCATCAGGATAGTGAATATTCCTCCGGGAGAGATCAGACGGTGACATCTTGAGGTAGAAGAATGATAAGTGAAATCTATTGAATAACACATGAATAGAATTTCACTCTATTAGGGTCCACTAAGCCAAGGCTAGATATGTTCTTTTCCATAGCAGCTTGAAAACACCAGCCGTTGGTTATCTGTTATGTACTATAATATATACTGCCTCTGTAATGTTGGTACCTCCATTTGTAAACATGATGGTTTGGAGATGGGTGGGGTCCCCAATAATAAAAGACTATGTGAATAACTCACCTTTTATGTGAAACTAATGGTATCAATTTCACATCACCATCTTAATAGAACTTTATATATCAGTGGTTAGAGTTAAAGAAGTATATCTGTGGAGATTCTAAATCATCAATCATTAACTCTTTGTACTTTGAAAACAGACATATGGATGTGTTTTTGTGCGTTGAAAACCTGTTTGAACTTAATTAGATGATCGGCTGGTACTGTTCTTGCAAGTTTCCTTAGCCCCATTCTTCTTGATCAAGGTTTTCATCTACCTCTATCTTCCAGGATGCATTGTATTGAAAAAATGTTTCAAATCTACTTCTAGTTAGGTAGGTAGACTTCCAGCCTTTATTTTCCTCTCTTTTTGCTATCATGTTTAAGAACTCAAAGCACAATGGAACTTGTGGCTAAAACTCACAGCCTCACTGGCAGCGTGATAGAAGGCTAACTGCTAGTGCAAGTAATGCTGAGAGCAAACATTATATGAGTGGGCATGGTATGTTTTACCAGAGTAATGCGCTTGATTAATGGGCTGAAATTGTAATGAACCTTCACATGGACATGAAACAGACCAGCTGAAATTGAATGGCTTCTTCTTCCCTAAATTGCTTTCTTGATTTCCCTATTACAGCTTCCTCTGCCCTGCATTCATCCAGATAGGATTAAATTGTTAAGGCACATAGCAGGTCTACATTAAATGGCCCATACATTTTATCCAAATCTTACCCATATGGGTCAGATGTGTATGATTGTATGCTCTGATCTGTAGCGGCTTATATTTTTCCTTTTAGTTAATTGTAACCGACAAGCTGGGCTCCACATGATATTTATATGTTTTGGTAATGCAACCTTTTCGTAAAAGAGAACTATTCGTTATTTTAACATACAAACACATCCTTTTTCATTTCATTTTTTAGAAGTTAATTACGTGTGAATGATCATAGCAGGTTATGTATGTGAACACTGCTGACTCAACATGAAACTGCCACTGATAAACAAATATAGAAAGAAGGAACTGCTTATGGCACTATGATTTTTTTAAAAATTTTATGCACTTTATGTACACTTGTTTTCGCATTATGGGAATGGGGTGAAGTGGAAAAAGAAAGTTGTGCCATGGCCATCTGTATGTCCAACTTCTATGTATCTATATATCTTGTGTACTGTGAACCCTTCAATCTGAAACATTTAGTTTTCGTCCTTATTCATTACTATGCTATTGTTTCTTGGGTTTCAGGCAGAACATTACCAGCCTATCATGGAGACAACAGATTTCTTCTTGGAGCTTGTTTCCTGAGTAAACTGCCTATGCTGCGCCCAATGAAGTTGTCTTTGGTATGCAGTGCTAATCCCAACAACCATAGGTCAAGAAGTTCGGATATCACACGCCATCAGAAGGGTGGATCAGCTCGGAGGAAAAGTAAGCCTTACCAGGAGAAAGATGACTCTGAGAATATTGATGAATTCGATACTGATATTATGTCCTCCAAAAATGGACCACCCATCTCTTTGACAAGCAATTCCCGTCCTCAAGCAACATCAGTCCCAGGGGAAAGAGAGAAGGAGATAGTAGAGTTGTTTAAAAGGGTTCAAGCACAATTGCGAGCAAGGGGGAAAGGGAAGGAGGAGAAGAAGCCTGAACAAGCAAAAGCACAGGGTGAGAGGGGCAGTGTTGACTCCCTTCTAAATCTGCTTAGGAAGCACTCAGTGGACCAACGAAGGAAGAGCGGTGATGAGAAAGAACAGAGTGTTGACCAAACAAAGAGAAGCAATGAATCTGGAAATAAACAAAATTCAAGCATCTTCATAAAGAATGACACTCAGGAAGAACAGAAAAAGCCACATCCTGCAGCCTTCAAAAGGCCAGCTTCAAATTTTAGGCGAAGATCCCCTGTTCCTAATGTAAAGTTCCAGCCTGTTACCAATGTTGATGCCGAACGAGTCATCAATAACATCAATGATGCCGTACAAGAGGCTAAGCCAACTTTGGAAAATAAGGCTGCTACAGATGAACCAGACTCGGTTTCTACATTCGAACCTAATTCTGTAATAGAACCAGAAAACCTATCTTTGGATGACCTTGATCATATTTCAGATGATGAACCTGATGCTTCTGATACTGATGAACCCAGTGGAGAATATGATGAGCCATCTTTGCAAATCCCAAGTGTTCCAATTATTGATGAATCTCATGATACGACTCTGAAATCTTCCTTAGGAGGTCCTGATTTAAGCACTTTGAAGGTCACAGAACTAAGAGAACTTGCGAAATCTCGAGGAATCAAAGGATATTCCAAGATGAAGAAGAATGACCTGGTTGAACTGCTGAGCAACATGGCTTGATCCATCAGCAGCCCTGTCAACTTGGCTCTGTTTTGTCCCTTGTTAGTCACATTGTCTTGGGCATATGCACTATCTTGCCATTCCTATCTTATCTAGATGAAGTTCTTTTAGGTAGAAAACTGTAAATGAGCAAGGTAAACAATGTTCTGTTCTGGTTTTATCGTTGCCCTTTCTGTTACCTAGCCTCTAGTTACCATTGTTTTTGCGTAAATCCTTCATCAGAATTGAACCCTGGATTGGCCATAAGACTGGCAACGATTCGACGTCATGCTGATTATGTTCTGATGTGTAGTGTTCTATTCTTATCTCTGTTGTTTCTCCCTTCTCATGGCAGCTCTTGTCTGCTGTTGCATGGTTTCTCTCGTTTACATCCATGGTTGTTACTGAACGTTTGATGCACAAGTCTTTTGTGTGTTCATGAAAAGAATAAGCAGAAGCAACCTATAATGGATTTCTTTGGTGTTCAATCGTTTACTGTCTTTGTTCAGAGCCAAGGTACTGATTGGGAGGATTTCCTGGGAATTGTCTGCCTCCCGATTATCAATTCAACAATCAGCTTCATTAAGGAAAACAATGCAGGCGATGCAGCTGCTGCACTCATGTCCCGGTTGGCGCTAAAAACAAAGGTTTTTTTTTTCTGAACAGAAATTTAAAAATTGCAAGTGAATCCATTGTGCTAGTCTGATCTTGTTGTATACATGGATTTGCTACCAGGTTCTTAGAGATGAGCAGTGGCAAGAGCTTGATGCTTCCACATTGGTACCTGGGGGGGATATAATCAGCATCAGGTTTGGTGACATTGTCCCTGCAGATGCGTGCCTACTTGAGGGAGATCCTCTGAAAATGAATTGCCACACGCCGTTCATGCGAAAGATGTCGATCACTGGAATGTCAGACTAGTTGATCCGTGTAAATAATTTGATCACATTTTTGTTTGTCCTTCATCTTGTAGTCAGCTCTCACTGGTGAATCCCTTCCTGTCACCAAAAGAACCGGGGACCATAGTGTTCACTGGCTCAACATGCAAGCATGGTGAGATTGAAGCTGTTGTCATTGCAACTGGGATACACTCTTTCTTTGGCAAGGCAGCTCATCTAGTGGACTCCACTGAGGTTGTTGGGCATTTTCAGAAGGTGATTCATCAATCTTTAGACTGTAATAAGATTATAAGAACCTCACAAGTGGATGTGCTGTAAGCTGTTTCTAACCACTGAATTTTCTGATTCTTACCTCCATAGGCAACTTCTGTATCTACTCAATCGCCATTGGTGTGATTGTTGAGGTTATAATCATGTTCCCAATCCAGCACCGGTCATACCGAGATGGGATTACGACTTCCCTCTGTTTATGGTTCTGATCATAGCCATACTAAATGATGGTGACGATCATTTCTCTCTGAATTTTACTGTTTCTGAAGCATAAATATATAGGTCGGCATCTGCTTTGATCAGGAACTATCATGACAATATCAAAGGATCGCGTGAAGCCATCACCAAGCCCAGATACTTGCAGCTGGAGTTGTCATCGTAACCTACCTTGCATTGGTCACCATGCTGTTCTATTTGTAACTCCTCAATAGGCTTCATGTCTGCACATTACCAGAAGCAAATTTTCAGATGATTGCATAAAATAGATAACAAAACAAAGTATGATGATCAGCAAGGCTGATATCAGGTAAGCATACGTTTAACTTCGTTTGAAGGGAATGAGGTGAATGGTTGCTGCTGTTCAAAGTGTTCTTCCATTGCAGCTTTGCGTTTTCTTCTCCTTATCACAAAGAATGCAAGGACTGCCCCAGAGCTTCCACCAAAACATGAACCACCATTGTCTTGACCTGGGCTGTTTGGACGGTTTGGTGGAGGGGGGAGCTGTATATGATGGAGGTGGTGGATTTCCGTCAATTCTGTACACAAGGATCATAATAGGTCAGTGTACAACTCTCATTTTTGCATGTTCATAAGCCAGGAGAACTCACTGTAGATTGTTTTAACTTCTTAATTTGACTAGGAATCCAGCCAGTGAAATGATTTTTTGCAACATTCCTATATAGGAAAGCAAAGATATGAGATGTGGTACTGCACGTGCAAATAAAATATTAATTACTTATAGGTTGATTTCTTACAGATCATCAAGGGAGAGATTAGCAAGGACATTGATATAACCAGTAAATTTATTGTTCTGCAGATATCTGAGAAGAACGAGTATGGGATCACAGGCATATCACTCTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA011327