BGIOSGA011354

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Revision as of 09:30, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA011354| Description = BGIOSGA011354| Definition = Oryza sativa Indica Group BGIOSGA011354, complete gene.| tag = | tid = BGIOSGA011354-TA|...")
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Gene Name

BGIOSGA011354

Description

BGIOSGA011354

Definition

Oryza sativa Indica Group BGIOSGA011354, complete gene.

LocusTag

'

Ensembl Transcript ID

BGIOSGA011354-TA

Ensembl Protein ID

BGIOSGA011354-PA

Length

2957

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:4396316..4399272

Sequence Coding Region

4398985..4399272,4397109..4397801),complement(4396718..4397029,4396563..4396619),complement(4396316..4396486

Genome Context

<gbrowseImage1> name=IndicaChromosome03:4396316..4399272 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:4396316..4399272 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTCGCTCTCCACTGTCAACCACGCCGCCGCCGCCGCCGCCGCAGCGGGGTCGGGGAAATCCTTCTCCGCGGCTGCGCCTGCGGCGCCATCGGTGCGCCTGCCAAGGACACGGGCTCCTGCTGCCGCCGCGGTGTCCGCGGCGGCTGTGGGGGCGGACCGCGCGGCGGACAGGGTGTCGGCGCTGAGCCAGGTCTCCGGGGTGCTGGGGTCGCAGTGGGGCGACGAGGGGAAGGGGAAGCTCGTCGACGTGCTCGCCCCTCGCTTCGACATCGTCGCGCGTTGCCAGGGCGGAGCAAATGCTGGACACACCATTTACAATTCTGAAGGAAAGAAATTTGCTCTTCATCTTGTTCCATCTGGTATTCTCCATGAAGGAACGCTGTGTGTTGTTGGCAATGGAGCGGTGATCCATGTTCCAGGATTTTTTAATGAAATTGATGGTCTTGAATCTAATGGAGTCAATTGCAATGGAAGAATATTGGTCTCTGACCGGGCACATTTACTCTTTGATCTGCATCAGGCTGTAGATGGACTTAGGGAAGCAGAGCTTGCTAATTCCTTTATAGGGACGACTAAGAGAGGCATTGGACCATGTTATTCCAGCAAGGTCACTCGAAACGGACTGCGAGTCTGTGATCTAAGGCACATGGACACTTTTGGGGATAAGCTTGATGTCTTGTTTAAAGATGCCGCTTCAAGGTTTGAAGGCTTTGAGTACAGCAAAAGCATGCTCAGGGAAGAGGTTGAGAGGTACAAAAGATTTGCAGAGCGCTTGGAGCCGTTCATTGCTGATACTGTTCATGTGTTGAATGAATCTATCCAACAGAAGAAGAAAATTCTGGTTGAAGGTGGTCAAGCAACAATGTTGGATATTGATTTTGGAACTTACCCATTTGTGACTTCTTCTAGCCCTTCAGCTGGTGGGATATGCACTGGCCTTGGGATTGCCCCAAGGTGTATTGGTGACCTGATTGGAGTGGTAAAAGCTTATACAACAAGGGTTGGTTCTGGGCCTTTTCCAACTGAACTGTTTGGAGAGGAAGGTGATCTCCTTAGGAAATCAGGAATGGAATTTGGGACGACAACAGGCCGCCCAAGGCGTTGTGGCTGGCTTGACATTGTTGCACTAAAGTACTGCTGCGAGATAAATGGGTTTTCATCTCTTAATCTGACCAAACTTGATGTTCTGTCTGGATTACCAGAAGTTAAGCTGGGGGTTTCTTATAACCAACCTGATGGGCAGAAGCTACAATCCTTCCCAGGGGATCTTGATATTCTGGAGCAAGTACAGATGCAATATGATTATTTCCATGAATGTCTTGGCATCAGGTCCTCTGTTAAACCTATGGTCAAATATGAGGTGTTGCCTGGGTGGCAAAGTGACATTTCGTCTGTCCGGAGTTACAGTGAACTTCCCCTAGCTGCCCAACGCTATGTCGAGAGGATAGAAGACCTCGTTGGTGTTCCAGTCCACTACATTGGTGTTGGACCTGGGAGGGATGCTCTAATATACAAGTAA</cdnaseq>

Protein Sequence

<aaseq>MSLSTVNHAAAAAAAAGSGKSFSAAAPAAPSVRLPRTRAPAAAAVSAAAVGADRAADRVSALSQVSGVLGSQWGDEGKGKLVDVLAPRFDIVARCQGGANAGHTIYNSEGKKFALHLVPSGILHEGTLCVVGNGAVIHVPGFFNEIDGLESNGVNCNGRILVSDRAHLLFDLHQAVDGLREAELANSFIGTTKRGIGPCYSSKVTRNGLRVCDLRHMDTFGDKLDVLFKDAASRFEGFEYSKSMLREEVERYKRFAERLEPFIADTVHVLNESIQQKKKILVEGGQATMLDIDFGTYPFVTSSSPSAGGICTGLGIAPRCIGDLIGVVKAYTTRVGSGPFPTELFGEEGDLLRKSGMEFGTTTGRPRRCGWLDIVALKYCCEINGFSSLNLTKLDVLSGLPEVKLGVSYNQPDGQKLQSFPGDLDILEQVQMQYDYFHECLGIRSSVKPMVKYEVLPGWQSDISSVRSYSELPLAAQRYVERIEDLVGVPVHYIGVGPGRDALIYK</aaseq>

Gene Sequence

<dnaseqindica>1..288#1472..2164#2244..2555#2654..2710#2787..2957#ATGTCGCTCTCCACTGTCAACCACGCCGCCGCCGCCGCCGCCGCAGCGGGGTCGGGGAAATCCTTCTCCGCGGCTGCGCCTGCGGCGCCATCGGTGCGCCTGCCAAGGACACGGGCTCCTGCTGCCGCCGCGGTGTCCGCGGCGGCTGTGGGGGCGGACCGCGCGGCGGACAGGGTGTCGGCGCTGAGCCAGGTCTCCGGGGTGCTGGGGTCGCAGTGGGGCGACGAGGGGAAGGGGAAGCTCGTCGACGTGCTCGCCCCTCGCTTCGACATCGTCGCGCGTTGCCAGGTGACGAGAGACGAATACGATTCCCTTTCCGTGGAATGCTTACTATTGCTCTAATCCATGCTTGATGGCTTGTTTGCTTGCACTACTACTGGGTGATAGAAATTGATCTTGCATGTTAATCGGAAGGAATCCTTGGAATCGAGGCTGTTTTGGTTGATTGATGTTTGATCCGGATGGTAGGCTCATCTGTGGTAGAATCATCCGTTCCTAGAAATTCAGCTTGTTTAGCTTCTACTTTTGTGGTTACTATGGTTTAGAAATCACCGCAGATAGCCTGGGTTTATCTCTGAAGTGTGTGTGCAGAAGAATAAATTTGCAACCTCTTATCTCCCCCTTTGTTTGTGGGTTGTAGTCTTGTAGACGATGAATTTTTACATTTCTTGTAAGTTGGCTGGGGCTTTGTGGTAGTGGTGGCAAAAGAGGCCTGGACGTTTGATTATGACAGCAAAAATTGAACTGTTAAAACACGACTCCTTTTGGATCACCAGCAGGATTGACTATCGATGATAATTCCCCTTCATATGGATGTCAAACAGCTTGTCATAATCATGCATGTACACGCTGGAGCAAATGTTAACATCCTTCCTTGCTGTAGCTTCTGAATCTAGCAGAAAAGCATGCAATTATTTCATTGCATAAGAAGTGCATGTGTGGTGATACTATGTGCAAGACTGCAAGCGTACAGCGTTGTAGTTTCTGTTGGGTAAAGTATTTGAGTTGCTTAACTCAGTCAAGAGATCAACCTCTTGGGTAGTTTAATTTAATTACTGGATTTACTTATTCTTTTTCAGCATATGGACTAGTGGTCATCTTTTAGGTAACTGAAGATGATATTATATCTTCAGTCTCAGCAGTCAGCACAATAGATGCACAGCCAAAGATCTCAAGTAGCGGGCCTGTTCGGCAGGCAGGTGCAGCAGCCAGCTGCAGCCAGCCCACTGTTTTTTTTTATTATTTTTGCTTGCTTAACTGTTCCTGCAGGCTGCAGCAGCCCTTGCAGCTGAACAGGCCCAATAGTGATCTAATTACTGTCAGTTTATTGATAACCAAAAGTTATTGTTATTGTCTTATGGTTTCCTTATGGTTTCCCTGGGAGACCATATAGTATGCTCCACGGTACCAGTTGTCTGTTGGTCTTAAGCATGGAAGCCTTAATCTTAATTTCTATTTTGTTTATCATCAGGGCGGAGCAAATGCTGGACACACCATTTACAATTCTGAAGGAAAGAAATTTGCTCTTCATCTTGTTCCATCTGGTATTCTCCATGAAGGAACGCTGTGTGTTGTTGGCAATGGAGCGGTGATCCATGTTCCAGGATTTTTTAATGAAATTGATGGTCTTGAATCTAATGGAGTCAATTGCAATGGAAGAATATTGGTCTCTGACCGGGCACATTTACTCTTTGATCTGCATCAGGCTGTAGATGGACTTAGGGAAGCAGAGCTTGCTAATTCCTTTATAGGGACGACTAAGAGAGGCATTGGACCATGTTATTCCAGCAAGGTCACTCGAAACGGACTGCGAGTCTGTGATCTAAGGCACATGGACACTTTTGGGGATAAGCTTGATGTCTTGTTTAAAGATGCCGCTTCAAGGTTTGAAGGCTTTGAGTACAGCAAAAGCATGCTCAGGGAAGAGGTTGAGAGGTACAAAAGATTTGCAGAGCGCTTGGAGCCGTTCATTGCTGATACTGTTCATGTGTTGAATGAATCTATCCAACAGAAGAAGAAAATTCTGGTTGAAGGTGGTCAAGCAACAATGTTGGATATTGATTTTGGAACTTACCCATTTGTGACTTCTTCTAGCCCTTCAGCTGGTGGGATATGCACTGGCCTTGGGATTGCCCCAAGGTGTATTGGTGACCTGATTGGAGTGGTAAGTTAGAACTATTGTAACTAAGACCTCTCTTCTTTCTATCATATAGCGCTGAGTCACTCCAATATTTCACATGCAGGTAAAAGCTTATACAACAAGGGTTGGTTCTGGGCCTTTTCCAACTGAACTGTTTGGAGAGGAAGGTGATCTCCTTAGGAAATCAGGAATGGAATTTGGGACGACAACAGGCCGCCCAAGGCGTTGTGGCTGGCTTGACATTGTTGCACTAAAGTACTGCTGCGAGATAAATGGGTTTTCATCTCTTAATCTGACCAAACTTGATGTTCTGTCTGGATTACCAGAAGTTAAGCTGGGGGTTTCTTATAACCAACCTGATGGGCAGAAGCTACAATCCTTCCCAGGGGATCTTGATATTCTGGAGCAAGTACAGGTAAGCATTTGAGATGCCATTGTTTTCTGTTTGTTGAATAGTAAGGTATTTGTGTAATGTAACTGTTTCTTGCTGAATTTTTTTTATCTTGTTGTAAGATGCAATATGATTATTTCCATGAATGTCTTGGCATCAGGTCCTCTGTTAAACCTATGGTATTTGCTGTTCTGTACTAGAGCTTATGTAAGGTTTATATCTTTCATCTCTCATTCGCTGAATCTTATATTTCAGGTCAAATATGAGGTGTTGCCTGGGTGGCAAAGTGACATTTCGTCTGTCCGGAGTTACAGTGAACTTCCCCTAGCTGCCCAACGCTATGTCGAGAGGATAGAAGACCTCGTTGGTGTTCCAGTCCACTACATTGGTGTTGGACCTGGGAGGGATGCTCTAATATACAAGTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA011354