BGIOSGA011365

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Revision as of 09:30, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA011365| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA011365, complete gene.| tag = OsJ_095...")
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Gene Name

BGIOSGA011365

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA011365, complete gene.

LocusTag

OsJ_09584

Ensembl Transcript ID

BGIOSGA011365-TA

Ensembl Protein ID

BGIOSGA011365-PA

Length

5875

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:4249429..4255303

Sequence Coding Region

4255067..4255303,4252400..4252465),complement(4251969..4252067,4251816..4251880),complement(4251666..4251750
,4251545..4251578),complement(4251279..4251378,4251037..4251112),complement(4250617..4250811
,4250355..4250498),complement(4250012..4250245,4249846..4249909),complement(4249719..4249762
,4249429..4249602

Genome Context

<gbrowseImage1> name=IndicaChromosome03:4249429..4255303 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:4249429..4255303 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCTCGCGGCAGCGGGGCCGGAGGAGGCGGCGGCGGTGGTGGTGGGGGGCTGGAGCTGTCGGTCGGGGTCGGCGGCGGCGGCGGCGCGCGTGGTGGGGGAGGCGGTGAGGCGGCGGCGGCGGTGGAGACGGCGGCGCCGATCAGCCTCGGGAGGCTCATCCTCTCCGGGATGGTCGCCGGCGGCGTGCAGTACGGGTGGGCGCTCCAGCTCTCCCTCCTCACCCCCTACGTCCAGACACTCGGACTGTCGCATGCTCTTACTTCATTCATGTGGCTCTGTGGTCCTATTGCTGGCATGGTGGTTCAACCATGCGTGGGTCTATACAGTGATAGGTGCACCTCAAAATGGGGAAGACGGAGGCCATATATTCTTACAGGATGTGTGTTGATATGCTTGGCTGTCGTAGTTATTGGATTTTCAGCTGACATTGGATACGCCATGGGTGATACAAAGGAAGACTGCAGTGTCTACCATGGATCACGGTGGCATGCTGCTATTGTATATGTCCTGGGATTCTGGCTTCTTGATTTTTCCAACAACACTGTGCAGGGTCCAGCACGTGCTCTAATGGCTGATTTATCAGGACGTCATGGACCTGGCACAGCTAACTCCATCTTCTGTTCTTGGATGGCAATGGGAAACATCCTAGGATACTCCTCTGGTTCCACAAACAATTGGCACAAGTGGTTTCCATTCCTTAAAACAAGAGCTTGCTGTGAAGCTTGTGCAAATTTGAAAGGTGCATTTCTGGTGGCTGTGATTTTCCTGTCCCTGTGCTTGGTTATAACTCTGATATTTGCCAAGGAAGTTCCATTCAAAGGAAATGCAGCCCTCCCAACAAAATCAAACGAGCCAGCTGAGCCTGAAGGCACTGGTCCACTAGCAGTGTTGAAAGGCTTCAGGAACTTACCTACTGGGATGCCTTCTGTGCTTATTGTGACTGGCCTTACCTGGTTGTCTTGGTTCCCATTCATCCTCTACGACACTGACTGGATGGGCCGTGAGATCTACCACGGTGACCCAAAGGGAACTGATCCTCAGATCGAGGCTTTCAACCAGGGTGTCAGGGCAGGTGCATTTGGCCTGCTACTGAATTCGATTGTGCTAGGATTCAGCTCATTCTTGATTGAACCAATGTGCCGGAAAGTCGGGCCAAGGGTGGTGTGGGTGACGAGCAATTTCCTCGTCTGCATCGCCATGGCTGCAACTGCACTGATCAGCTTCTGGTCACTCAAGGACTTCCATGGAACTGTTCAGAAAGCCATCACTGCAGACAAGAGCATCAAGGCTGTCTGCCTCGTCCTCTTTGCGTTTCTTGGAGTCCCTCTCGCCGTTCTGTACAGTGTTCCCTTCGCAGTGACGGCGCAATTAGCGGCCACTAGAGGGGGTGGCCAAGGGCTCTGCACCGGCGTCCTCAACATCTCCATCGTCATCCCTCAGGTGGTCATCGCGCTGGGAGCCGGGCCGTGGGACGAGCTGTTCGGGAAGGGGAACATCCCGGCGTTCGGCCTCGCCTCGGGATTCGCGCTCATCGGCGGCGTCGCCGGAATATTCCTGCTGCCCAAGATCTCCAAGCGCCAGTTCCGGTCGGTCAGCATGGGCGGCGGTCACTGA</cdnaseq>

Protein Sequence

<aaseq>MARGSGAGGGGGGGGGGLELSVGVGGGGGARGGGGGEAAAAVETAAPISLGRLILSGMVAGGVQYGWALQLSLLTPYVQTLGLSHALTSFMWLCGPIAGMVVQPCVGLYSDRCTSKWGRRRPYILTGCVLICLAVVVIGFSADIGYAMGDTKEDCSVYHGSRWHAAIVYVLGFWLLDFSNNTVQGPARALMADLSGRHGPGTANSIFCSWMAMGNILGYSSGSTNNWHKWFPFLKTRACCEACANLKGAFLVAVIFLSLCLVITLIFAKEVPFKGNAALPTKSNEPAEPEGTGPLAVLKGFRNLPTGMPSVLIVTGLTWLSWFPFILYDTDWMGREIYHGDPKGTDPQIEAFNQGVRAGAFGLLLNSIVLGFSSFLIEPMCRKVGPRVVWVTSNFLVCIAMAATALISFWSLKDFHGTVQKAITADKSIKAVCLVLFAFLGVPLAVLYSVPFAVTAQLAATRGGGQGLCTGVLNISIVIPQVVIALGAGPWDELFGKGNIPAFGLASGFALIGGVAGIFLLPKISKRQFRSVSMGGGH</aaseq>

Gene Sequence

<dnaseqindica>1..237#2839..2904#3237..3335#3424..3488#3554..3638#3726..3759#3926..4025#4192..4267#4493..4687#4806..4949#5059..5292#5395..5458#5542..5585#5702..5875#ATGGCTCGCGGCAGCGGGGCCGGAGGAGGCGGCGGCGGTGGTGGTGGGGGGCTGGAGCTGTCGGTCGGGGTCGGCGGCGGCGGCGGCGCGCGTGGTGGGGGAGGCGGTGAGGCGGCGGCGGCGGTGGAGACGGCGGCGCCGATCAGCCTCGGGAGGCTCATCCTCTCCGGGATGGTCGCCGGCGGCGTGCAGTACGGGTGGGCGCTCCAGCTCTCCCTCCTCACCCCCTACGTCCAGGTATATATATATATACTGTACTCCTGTGTATTTTGCACACTCTCATGCATGCATCTGAAACTCTGAATAATCCTGCAAAAAATATATACAAGTATCTCACGTGTGGATTTGATTTTGTTCGCGAGTTTTTGCTCGTGCTAGCTGTTCTAATCTGCAAGGTTTCATGGTAGTAGATTATATATGTCCTGGTTACAATCTTTTCAAGGTTGTAATCTTGTAATTTTTTTCTGCTTTGTCAATATTAACTTCGCACTGTCTGGTGTGAGTTGTTAAAAAAATATATATATAAGATTGGGGAATTTTTCTTCATGTGTGGGGAGAGATTTATTTTTTTTTGTTTGAACGGTAGATTTGACTAGTGTCTAAAAGTACCGTAATAAATTCAATCTGCATGCCTTTTGTAATTTTTTTTTGCTCATGTGTTTATATACATGTGGCCAAATATGCATTTGATGCACTAGCTATCATTTTTGTCATTTTGTAGTTATTCCTTTTCCTTTCCTTTTTTTTCCTTTTTCTTTTTGTTGTCACTAGAGGATTCATATCCTCTCGATTCCTCTATGAAACGTCGGCGTTTTCTGCCTCTTTTCTGAAGAATCTGTATACCTATATAAGAATCAAAATCTTTTATAAGTTCTTTTTGTGCACTTTGGATCAATCAGGCTAGCCAGCATGACACTTAGCATCAGTACCGGTCTACTGTACCGAGATTCATTTTACGCTTGACACGTTTCTCAACTCCTTGTTTGATTCCATTTTACCTCAATTAGACTGTTTGATTCCGTTTTATCTCAGATATGACACTCCTTTTTTTAAAATTCCATTTTACCTCAGATGCTGTACAGTTCCATAAAAAAATATACATCTGCTCCAACTCACCTTATCCTTCTTGTAATAACCACGTATTAGGTTAATAGCTACTAATAGCTAGAGATGTAAACAAAAATAAGCAGACAAGGGCAAAAGTGAGCGGTAATAATGGAGAATTAATCTGTCGTTCCTCCGCGCGCAGTTAAAGGTAGGCAGATGACGGGTCCCTCCCCTCTATTCCATACTAACCGCAAGATGAAACTAATATTCTTACTGCTAGATATATAAATCATCCTTCATTTAGCTTCATCTCCCTCCTTAAGATGTGTTCTTTTCTTCCATTTCCTAACTTCTACTCCCTTCGTTTGACGTACACATATTTCCTAAACTGCCAAACGATGTGTTTCTACCAAATATTTATATGGTTTAAAAAACATATTAATATATTTTTTGTCTTTTTAGCTAATATTTAATTAATTATGTGCTAAACTACCGCTCAATTTTGTGTACCGGGAGAAAGGGTTCTCAATCATTACAAAAGAACACAGCCTAGTCTCCATGAAAAACATCACTTTTATTTTAAGACAGAGCAAGTGGAGCGATTTTATAACTTTACTATAGTACAAAATTAATGGTCAGAAATTTAAAATTTTGACCGAATTTTATCGTAAGCATCAAATATTTATTACCGGAGAGATAGAGTATTGGTTATTTGCCTCTCTGTCGTCAAATATTCTAAACAAAGACGATCTTCTTAGTGGTTAAACTTAAATCTCAGTCCTTCCAGGCGTTTATTTGAAGGATTTATAGCGGAGATAAACAGCTCCTTTTTTTTCGGAAATACGTAAGGAGCGCACTTTTGTATTAAGGGGAATAAAAAGGGTCTGTACAGGGAAAACCAAAAAACAGCAGGGGACAGGAATAAACAGCTCCTCACTTCCTCTTTGTATCAGTCCATACTAATTAACAAAGTGTTCCAAAATGTTCTGTACTTTTTCTGTAGAACATTATATGCAGTTCATCACCCCTGATGGTCCATGCATCAGGTCTAGCTACCTACTGTTGTATTGAAGTATTTCTGACGAAGTTTATCCTTACCTTAGCCTTCTCGAGCCAAGTGCCATAAAGATGGTTGCTGTAGAGGCAACTCCAACCCACTTTAACCGCGCACATGAAAAATAAAGGGGTAAAACAAGGAAATTCTAGGTCAGATATATATGTCCTGTGGACTGTGGCACAGTTGCAACAGAGCAATTGCATAGGCAAATGAGGGCAGATCATCATGTACCCATAGCCTGTTGGTGCTATGTTAGCATCCAAGCATTGCCATTTTAACTATTAAGATTCTTCTTCTTATATTTGACAAGTGAAATAAATTTAGTGACTGAACATATATAGAACGATGAACAGTCTTTGTATGTTTATTCATGCCATGGGGGAAAGAGAAGTGTGATCTGAAGTTATTGGATAGATAGCTGTTAGTTGTAGCATGCAAGGCAATGCATCCTGGAACCAACAGACCAACAGAGCTGGGGATATTTCATCTGCTAAATTTCTGGGAAATTTTATTTTGTGGTAATCAATATGTGTTCACTCTTTGCAACTGGTACACGCTCTCTGATGTTTCTGAATATCTTCCACAGTGATGCAGATCTTGTTGACACAGCAAACTCAACAAACATAGTCATTTTTTTAAGGAATGAAGCATGATCATCTATTGTCAGAGTAGATTACAGTCAAAGTTTTTTTATAAGCCAAAACAACTGATTTTCTAACCTCTGTTATTTACAGACACTCGGACTGTCGCATGCTCTTACTTCATTCATGTGGCTCTGTGGTCCTATTGCTGGCATGGTGGTAAGTAACAATACCAAATTATCTGCTCTATCGATATATACGAGACAAAGCTTTTGCCCTCTTTTAAAAAAAAATAAATCAAATTAATTCATGTTATGGAATCTGTACTTTCTGCAATGTAAATTCAAGTTACTTTAGTGTCTTCACTACAACAAAAACTTGGGTATCCTGAACTCCTGTATCTATCAGAGTTTGAAGCTGCATTTTCTGTAGCTTCTGATATGTGTAATGTAGATCATACTGTCATAATTCATCAGCTTTCATAAAAAATGTTTGTGTACAAGTCATATTTTTTTTAATTCTTGATCCATTATCATCTCCCAATCCTGCAGGTTCAACCATGCGTGGGTCTATACAGTGATAGGTGCACCTCAAAATGGGGAAGACGGAGGCCATATATTCTTACAGGATGTGTGTTGATATGCTTGGCTGTAAGAACCACTGAACCTTGAACTCTTATTCCTTAAGTTGAAGTCCCCAAATTTTCTCTCATATTGACATTGCACTTTATGTATGTAGGTCGTAGTTATTGGATTTTCAGCTGACATTGGATACGCCATGGGTGATACAAAGGAAGACTGCAGGTAACTGAACATTTTGCGTATCATAATTAGCAGATAACAGTTATCTGATACACCATGTAATGCAGTGTCTACCATGGATCACGGTGGCATGCTGCTATTGTATATGTCCTGGGATTCTGGCTTCTTGATTTTTCCAACAACACTGTGCAGGTTAGTGCCTACTATATAATAATCATGTTAAAGAAATTTGTACAAAGAATCATAACAAAAATCTTAATTTTGCAATGCAATTTCTAGGGTCCAGCACGTGCTCTAATGGCTGATTTATCAGGTAATTTTTCATAGCCTTGTCTTTCAGAGTTAACTACCAAATTTTTATTGGTTTCCACAGTTCACTAACACTTGATTGATTCCAGAAAAAAAAAAGTTGCCCTTGTGTTCTGGGCTTCTGGTATCAGTGGGATTTTGGATTTGATCTCCTAATTTTCGTTCTGTAGGACGTCATGGACCTGGCACAGCTAACTCCATCTTCTGTTCTTGGATGGCAATGGGAAACATCCTAGGATACTCCTCTGGTTCCACAAACAATTGGCACAAGTAAGTTACTCTTATGTATCAGTTTCATACAGATTTTCTGTTTAGCACAGTCTATTCAGTTGCATTCTTTTCTGAAAGAAGGCAAGTGAAATTCATATTACATTAGTAGAGAAGGTGAAATTTGTTTACAAGTATTGAGTTGCATTCTCCCTAATTAATTGCGCAGGTGGTTTCCATTCCTTAAAACAAGAGCTTGCTGTGAAGCTTGTGCAAATTTGAAAGGTGCATTTCTGGTGGCTGTGGTAAGTTCTGTTATTACCTCATAAACTGCCTGCTGATAATACTTTAACAATGTGCTAATATTAGTCTTTGTAATAAGATAGTACTATACTGAAAATATTTTAGCGAGTATGAGTAATTTAACTTACATATTGTATTGCTGTTCCTCTTTTTTCAACCCTGTCATATTGGTTGCTTTTTTTCACAGCCTAACATGCTCTTGTTTGGTCATTTTCCCCTGTTTTCAGATTTTCCTGTCCCTGTGCTTGGTTATAACTCTGATATTTGCCAAGGAAGTTCCATTCAAAGGAAATGCAGCCCTCCCAACAAAATCAAACGAGCCAGCTGAGCCTGAAGGCACTGGTCCACTAGCAGTGTTGAAAGGCTTCAGGAACTTACCTACTGGGATGCCTTCTGTGCTTATTGTGACTGGCCTTACCTGGGTATGCAATATACATCAGAAAAAGAACTTTTCAGATTACTGAAAAAAATGCTACTCGATCATATCTTAGTTATATCTTATAGTACCTTACCTTTTCTATGATATGATTGTCCTTGTAGTTGTCTTGGTTCCCATTCATCCTCTACGACACTGACTGGATGGGCCGTGAGATCTACCACGGTGACCCAAAGGGAACTGATCCTCAGATCGAGGCTTTCAACCAGGGTGTCAGGGCAGGTGCATTTGGCCTGCTACTGAATTCGGTAAGATCTGATTGGTTTCTGAATTCTGATTGCCACAACTACTGTCAAATCTTTAACACTCGAGCCATGTTCTTTGGCAGCAACTAACCATGGGCTTCTGATCGTGTAGATTGTGCTAGGATTCAGCTCATTCTTGATTGAACCAATGTGCCGGAAAGTCGGGCCAAGGGTGGTGTGGGTGACGAGCAATTTCCTCGTCTGCATCGCCATGGCTGCAACTGCACTGATCAGCTTCTGGTCACTCAAGGACTTCCATGGAACTGTTCAGAAAGCCATCACTGCAGACAAGAGCATCAAGGCTGTCTGCCTCGTCCTCTTTGCGTTTCTTGGAGTCCCTCTCGCCGTAAGAATCACTGACACTTCAACTTAAACACATTGCTAAAAAAAATTATTTCCTCAAGAATGCCTTATCCTGATGAACTGTCTGAAAATTTGCGCGATGCAGGTTCTGTACAGTGTTCCCTTCGCAGTGACGGCGCAATTAGCGGCCACTAGAGGGGGTGGCCAAGGTATGAATCCCAACATTCTTGCAGCTTTTCTTGACATAATTCGGTGTTGTTTGGATGCTGGTCTAATCCATGGCGATCTGCAGGGCTCTGCACCGGCGTCCTCAACATCTCCATCGTCATCCCTCAGGTTAATTAGCTGCCAAATTCTAATCCGTTTCCCTTGAAACCGAATCAGATATACTTCATGGATTATTAGAATTTGAATGCTCATGGATTCATGGTTGCGTGGTGTTCTTCCCTCAGGTGGTCATCGCGCTGGGAGCCGGGCCGTGGGACGAGCTGTTCGGGAAGGGGAACATCCCGGCGTTCGGCCTCGCCTCGGGATTCGCGCTCATCGGCGGCGTCGCCGGAATATTCCTGCTGCCCAAGATCTCCAAGCGCCAGTTCCGGTCGGTCAGCATGGGCGGCGGTCACTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA011365