BGIOSGA011377

From RiceWiki
Revision as of 09:30, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA011377| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA011377, complete gene.| tag = OSJNBA0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA011377

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA011377, complete gene.

LocusTag

OSJNBA0091P11.28

Ensembl Transcript ID

BGIOSGA011377-TA

Ensembl Protein ID

BGIOSGA011377-PA

Length

2635

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:4151597..4154231

Sequence Coding Region

4152776..4154231,4152430..4152515),complement(4151597..4151626

Genome Context

<gbrowseImage1> name=IndicaChromosome03:4151597..4154231 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:4151597..4154231 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGCTCCGGGGCTTCCTCTCCGATCCCTCCGAGCTCCGCGAGCTCCTCTTCGCCTCCGCCGTCGCGGTCCGCGGCGCCATCGCGCACGCCTACCTCGTGTTCGACCAAATACCCCGCCCGGACCGCTTCATGTACAACACCCTCATCCGCGGCGCCGCCCACACGGCCGCGCCCCGGGACGCTGTCTCCCTGTACACGCGCATGCTGCGGCGCGGCGGCGGCGGCGGCGTGAGGCCCGACAAGCTCACGTTCCCGTTCGTGCTCCGCGCTTGCACCGCCATGGGCGCGGGGGACACCGGGGTTCAGGTGCACGCCCACGTTGTGAAGGCTGGCTGCGAGTCCGACGCGTTCGTCAAGAACGCGCTCATTGGCATGCACGCGAGCTGCGGGAATTTGGGCATTGCGGCTGCTCTGTTCGATGGCAGAGCTCGTGAGGATGCCGTGGCTTGGTCGGCGATGATCACGGGGTGTGCAAGGCGAGGGGACATTGGTGCTGCACGGGACCTGTTCGACGAATGTCCTGTGAAGGACCTCGTGTCCTGGAATGTGATGATCACCGCGTATGCGAAGCGGGGAGATATGGCATTGGCAAGGGAGCTATTCGACCAGGTACCCGAGCGAGATGTCGTGTCCTGGAACGTGATGATTTCTGGGTATGTGAGATGTGGCTCGCATTTGCATGCACTGGAGTTGTTTGAGCAGATGCAGCGCATGGGTGAAAAGCCAGATATTGTCACAATGCTCAGCTTGCTGTCAGCTTGTGCTGACTCTGGTGATCTGGACGTTGGCCAGAGGCTGCATTCCTCTCTTTCAGATATGTTTTCAAGAAATGGGTTTCCAGTTGTTCTAGGAAATGCACTGATTGACATGTATGCAAAATGTGGGAGCATGAAAAGTGCACATGAGGTGTTCTGGTCAATGCGAGACAAGGACGTCTCAACTTGGAACTCAATTGTAGGAGGACTGGCACTGCATGGGCATGTCCTGGAATCCATAGATATGTTTGAGAAGATGCTGAAGGGGAAGGTCAGGCCAGATGAGATCACCTTTGTTGCTGTCCTTATCGCCTGCAGCCACGGCGGGATGGTTGACAAGGGACGTGAATTCTTCAACTTGATGCAGCATAAGTACAGGGTTGAACCCAATATCAAGCACTACGGTTGCATTGTGGACATGCTGGGTCGTGCTGGGCTACTAAAAGAAGCATTTGAGTTCATTGATACGATGAAATGTGAGCCTAATTCTGTCATTTGGAGAACACTACTTTCTGCTTGTAGGGTTCATGGTGAGATCGAACTGGCTAAACATGCAAATAGGCAACTGCTAAAGGCAAGGAATGATGAAAGCGGTGATTATGTTCTCCTCTCAAACATCTATGCATCTGTTGGAGAATGGTTTGGGTCAGAGAAAATGAGAAAGTTAATGGATGACAGTGGTGTCAACAAAGAAGCAGACTCAGAGAGGTTGCATCACAGGCTATTGTTTGGATTTCTAGTCAAGCAGATAAACATCAGCCCAAGCTGCATAAGCTACATAAAGGAATACAATGTAAATCCACACCCCAAGTAG</cdnaseq>

Protein Sequence

<aaseq>MALRGFLSDPSELRELLFASAVAVRGAIAHAYLVFDQIPRPDRFMYNTLIRGAAHTAAPRDAVSLYTRMLRRGGGGGVRPDKLTFPFVLRACTAMGAGDTGVQVHAHVVKAGCESDAFVKNALIGMHASCGNLGIAAALFDGRAREDAVAWSAMITGCARRGDIGAARDLFDECPVKDLVSWNVMITAYAKRGDMALARELFDQVPERDVVSWNVMISGYVRCGSHLHALELFEQMQRMGEKPDIVTMLSLLSACADSGDLDVGQRLHSSLSDMFSRNGFPVVLGNALIDMYAKCGSMKSAHEVFWSMRDKDVSTWNSIVGGLALHGHVLESIDMFEKMLKGKVRPDEITFVAVLIACSHGGMVDKGREFFNLMQHKYRVEPNIKHYGCIVDMLGRAGLLKEAFEFIDTMKCEPNSVIWRTLLSACRVHGEIELAKHANRQLLKARNDESGDYVLLSNIYASVGEWFGSEKMRKLMDDSGVNKEADSERLHHRLLFGFLVKQINISPSCISYIKEYNVNPHPK</aaseq>

Gene Sequence

<dnaseqindica>1..1456#1717..1802#2606..2635#ATGGCGCTCCGGGGCTTCCTCTCCGATCCCTCCGAGCTCCGCGAGCTCCTCTTCGCCTCCGCCGTCGCGGTCCGCGGCGCCATCGCGCACGCCTACCTCGTGTTCGACCAAATACCCCGCCCGGACCGCTTCATGTACAACACCCTCATCCGCGGCGCCGCCCACACGGCCGCGCCCCGGGACGCTGTCTCCCTGTACACGCGCATGCTGCGGCGCGGCGGCGGCGGCGGCGTGAGGCCCGACAAGCTCACGTTCCCGTTCGTGCTCCGCGCTTGCACCGCCATGGGCGCGGGGGACACCGGGGTTCAGGTGCACGCCCACGTTGTGAAGGCTGGCTGCGAGTCCGACGCGTTCGTCAAGAACGCGCTCATTGGCATGCACGCGAGCTGCGGGAATTTGGGCATTGCGGCTGCTCTGTTCGATGGCAGAGCTCGTGAGGATGCCGTGGCTTGGTCGGCGATGATCACGGGGTGTGCAAGGCGAGGGGACATTGGTGCTGCACGGGACCTGTTCGACGAATGTCCTGTGAAGGACCTCGTGTCCTGGAATGTGATGATCACCGCGTATGCGAAGCGGGGAGATATGGCATTGGCAAGGGAGCTATTCGACCAGGTACCCGAGCGAGATGTCGTGTCCTGGAACGTGATGATTTCTGGGTATGTGAGATGTGGCTCGCATTTGCATGCACTGGAGTTGTTTGAGCAGATGCAGCGCATGGGTGAAAAGCCAGATATTGTCACAATGCTCAGCTTGCTGTCAGCTTGTGCTGACTCTGGTGATCTGGACGTTGGCCAGAGGCTGCATTCCTCTCTTTCAGATATGTTTTCAAGAAATGGGTTTCCAGTTGTTCTAGGAAATGCACTGATTGACATGTATGCAAAATGTGGGAGCATGAAAAGTGCACATGAGGTGTTCTGGTCAATGCGAGACAAGGACGTCTCAACTTGGAACTCAATTGTAGGAGGACTGGCACTGCATGGGCATGTCCTGGAATCCATAGATATGTTTGAGAAGATGCTGAAGGGGAAGGTCAGGCCAGATGAGATCACCTTTGTTGCTGTCCTTATCGCCTGCAGCCACGGCGGGATGGTTGACAAGGGACGTGAATTCTTCAACTTGATGCAGCATAAGTACAGGGTTGAACCCAATATCAAGCACTACGGTTGCATTGTGGACATGCTGGGTCGTGCTGGGCTACTAAAAGAAGCATTTGAGTTCATTGATACGATGAAATGTGAGCCTAATTCTGTCATTTGGAGAACACTACTTTCTGCTTGTAGGGTTCATGGTGAGATCGAACTGGCTAAACATGCAAATAGGCAACTGCTAAAGGCAAGGAATGATGAAAGCGGTGATTATGTTCTCCTCTCAAACATCTATGCATCTGTTGGAGAATGGTTTGGGTCAGAGAAAATGAGAAAGTTAATGGATGACAGTGGTGTCAACAAAGAAGCAGGTCAAACGTTTGTAGATGGCAGTGTGAAGGATATAATTCAGTCTTTTGGACAGTCGAGATCACATTCTGAAAGAAAAGGATTCATTGGTTGAGGATATCAGTTGTGAAGCTCTGTTCTGGATCAGAAACTGAATATCACATATGGGAAATGGGAAAGAAAATGATGCAGATGTATGTGCGCGAAGAACAACAAGCTATCCTGAATAGTGAATTCTAGTACTTATGATGATATATTAATGAAATGGGTCTAATCTTGTCAGACTCAGAGAGGTTGCATCACAGGCTATTGTTTGGATTTCTAGTCAAGCAGATAAACATCAGCCCAAGCTGCATAAGCTACATAAAGGTGAACAATTTGTAACAACAAGATGTGCAGCCATGGCTTGTGGTTATACATATCCTCCATTGTGTTATCTTCTGATATCCTTTTTAGTACAGATGCAACCCTTTCCTGAACTCAATTATATAAACAAGGTAATGAGTCATGGATCGTGGCTATAAATATGTGAAACAGCTTCAATCCATCCAAACATCAGTTTGCACATCATTTGTACAATGGGAGTATGGCACTGTGTTTGTGCAAGTGAAAAAAGCTACATGAGCGACAAAAGAGTGATGCTGTCATCGATGCCTGTATGGTTGTAAATAAGCATAAGTTGATGGTTCTGCAAGAAGGGATTGCAATGATCAAAACAAATTGTGGACAAGGATCTGAACTGTGCGAAATTGCATGTTTGCCTTTGCAAAGAAATGGCCAAATTACCCATATTATTTACAGAATATAATGGTTATTCTTGGGTAAGAACAAAAGCAGTTTGCTTTGTTACAATTTCTGTGTATTCTGAAGCCAATACTGGCCTGCGCAATATGCCTGCAGAATATTAATTGTTTTGAGCTTTATTAATTTTGTTAAAGTGTTACGCACTTACGCTCAGTTGCCATTGCTCTGTAGCAGCCAATTGTATTATGAAAGCTGTGAATTGTTTTGCCAAAAGGTGGATCTTCCAGTTCTCCCCAGAAGAAAGAGAACCATGAATAATAAAGCATATCACTGTTTTTATCAGATGCACGGTGTACTGCATTGCTGTATAGTGGACAGAGTTCAATATTAAAATTGTATCTGTTGAATTTGAAACTTCTTATGTGCAGGAATACAATGTAAATCCACACCCCAAGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA011377