BGIOSGA011381

From RiceWiki
Revision as of 09:30, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA011381| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA011381, complete gene.| tag = OSJNBA0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA011381

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA011381, complete gene.

LocusTag

OSJNBA0091P11.13

Ensembl Transcript ID

BGIOSGA011381-TA

Ensembl Protein ID

BGIOSGA011381-PA

Length

3940

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:4107880..4111819

Sequence Coding Region

4111724..4111819,4111052..4111108),complement(4110645..4110722,4110501..4110584),complement(4110331..4110402
,4110055..4110126),complement(4109819..4109859,4109299..4109365),complement(4108550..4108741
,4108384..4108473),complement(4108195..4108302,4107880..4107945

Genome Context

<gbrowseImage1> name=IndicaChromosome03:4107880..4111819 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:4107880..4111819 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGCCCATGAGCGTGGACGGCGGCGGGGGATGCGGCGGCCTGGACACGCAGATCGAGCAGCTGATGCAGTGTCGCCCGCTCGCCGAGCAGGAGGTTAAAGCACTGTGCGAGAAGGCCAAGGAGATATTGATGGAGGAAAGCAATGTTCAGATAGCTCATAGTATGTGCACATACAATTCTGCTAAGACGTTCTCAAAATATTTGCATGTTCTGTTCCATGGTAATTTGCCTGTCAAAAGCCCAGTAACGATTTGTGGTGATATTCACGGACAATTCCATGATCTTGTAGAACTTTTTCGGATCGGTGGGAAGTGCCCAGATACTAATTATTTATTTATGGGGGATTATGTGGATCGTGGCTATTACTCTGTTGAGACTGTTACTCTTTTGGTAGCGCTGAAGGTGCGTCACCCACATCGGATTACAATCCTTCGCGGAAATCACGAGAGCCGGCAGATCACACAGGTTTATGGATTCTACGACGAATGTTTACGAAAGTATGGCAATGCAAATGTATGGAAGATATTCACGGATTTATTTGACTATTTTCCACTGACAGCACTGGTGGAATCTGAAATTTTCTGCCTGCATGGTGGTTTATCTCCATCAATTGAGAACCTTGATAGTGTGCGTAGCTTAGATCGTGTCCAAGAGGTTCCGCATGAGGGACCAATGTGTGATCTTCTATGGTCTGATCCAGATGACCGCTGTGGTTGGGGCATATCTCCTCGTGGTGCTGGCTACACTTTTGGGCAGGATATATCCGAGCAATTCAATCACACCAACAATCTCAAACTTGTAGCTCGGGCTCATCAACTAGTTATGGAAGGATATAATTGGGCTCATGAACAAAAAGTTGTTACTATATTCAGTGCTCCAAATTATTGTTACCGATGTGGGAATATGGCATCCATTTTGGAAGTTGATGACTGCAACAGCCATACTTTTATTCAGTTCGAACCAGCTCCTAGGAGAGGTGAGCCTGACGTGACACGGAGGACGCCCGATTATTTCCTTTGA</cdnaseq>

Protein Sequence

<aaseq>MEPMSVDGGGGCGGLDTQIEQLMQCRPLAEQEVKALCEKAKEILMEESNVQIAHSMCTYNSAKTFSKYLHVLFHGNLPVKSPVTICGDIHGQFHDLVELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRHPHRITILRGNHESRQITQVYGFYDECLRKYGNANVWKIFTDLFDYFPLTALVESEIFCLHGGLSPSIENLDSVRSLDRVQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDISEQFNHTNNLKLVARAHQLVMEGYNWAHEQKVVTIFSAPNYCYRCGNMASILEVDDCNSHTFIQFEPAPRRGEPDVTRRTPDYFL</aaseq>

Gene Sequence

<dnaseqindica>1..96#712..768#1098..1175#1236..1319#1418..1489#1694..1765#1961..2001#2455..2521#3079..3270#3347..3436#3518..3625#3875..3940#ATGGAGCCCATGAGCGTGGACGGCGGCGGGGGATGCGGCGGCCTGGACACGCAGATCGAGCAGCTGATGCAGTGTCGCCCGCTCGCCGAGCAGGAGGTGAGAGCGAGCGAGCGAGATCCCTCTGCTGCTGCTGCTGCTCTGGCTTTTCCGCGTTCTGGTCTCGCCGTTCGTCCCGCCGGCGATGGCTCCGCGGGGGGCGCCTCGATCTGGGGAATATGGTGGCGCTTTGATCTGTTCCTAGGGTTTTTTTTTGTTCGGGGATGTTGGGTTGGGGGGTTCGGATTTGCCGTGTGATCCGGTGGTTCGCGAGCGATTGGCGCGTAGTTTTTGTTGTGCTGGGTGATTTGGCGGTTTGGAGAGGGGTTCGAGTGCTTGTTTGTTGTGGCTGGCGAGGGCAACTTGGAATTTGGTGCCTTCCGATGTGATGATCCAGATTTGGTTCATGGTAGTAGATCGCTAGAGATGGTCGCGGAAAGTAGCATAAAAATTGGAAATTTACAAGCACACGTAGTCACTGCTACCTTTTGTTTTGATCGCAAATTAGGTTCACATGCTTATAACCTGTAGAATACGATAGGATATATACATATGTGTGGATATGCATGGACGGTTGACCAAAAATAGGAACATTTGATGGGCATAAATGTCTACACAACTGGTGTTCTTATATTCCTGGAATCTACGTGTGTTCTAATGGACCCTCAATTGCAGGTTAAAGCACTGTGCGAGAAGGCCAAGGAGATATTGATGGAGGAAAGCAATGTTCAGGTATCGCATACTGCCGGTTCTTTTCTCACTGTTATGCTGGGTATATTTCAGGATAGGTGTGAGTGTGACAGGATTTCCTTATTGCTTCTTCAACAGTTGATTGAACCTGCACTATGGTTTTGGCATTGTATTTGAGCAAGGGTACTTCATAGTGTTACACAAGTTAGTTGGTCCCTTGATATGTTTTAGTCATACATTTCTGTGCCTTTCAGTCCAACCATAATTCTGCCAATGCTGATGACTAAAATAAACACAGGAATTCAAGTCTTCCTCCTTCCATTCAATTTTCATCACCTTAATTTTTACCCCCTCTTTTACATGCCATTCAGATAGCTCATAGTATGTGCACATACAATTCTGCTAAGACGTTCTCAAAATATTTGCATGTTCTGTTCCATGGTAATTTGGTAAGGTAGATGAGTACTGGTTTTAAGGTTTTGCCTTTTTTTTTTTTTTTGGTTATGCAGCCTGTCAAAAGCCCAGTAACGATTTGTGGTGATATTCACGGACAATTCCATGATCTTGTAGAACTTTTTCGGATCGGTGGGAAGGTACTATTTGCATTTACCTTTGCTACCATACTTTGAAATCTTCCTTTCGTTATTCTGTTCTTAAAGATACTTAATATATTTGTTCTTCTTTGTTTCAGTGCCCAGATACTAATTATTTATTTATGGGGGATTATGTGGATCGTGGCTATTACTCTGTTGAGACTGTTACTGTAAGAGTTAACCTACTTATTTTCTTTGATGAGTATTTATATACAGTTTTACAGAAGCTGTCAAGTTTCACATACCAGATTTATTTGTTCTTATTGGCCAGCAACAAAATTCGATTACTGGAATTCTTTCAAATATTTCAATTGTTTTATGTTTGAGATCATGTCATTATGTGTAAGCACTACTGAGTGGTATTCCTTATCCAGCTTTTGGTAGCGCTGAAGGTGCGTCACCCACATCGGATTACAATCCTTCGCGGAAATCACGAGAGCCGGCAGGTGCTGTTCAACTTTTCTCAATGACTATGTGCAGACTTGGCCGCAATTTTCTCAGTTGATTAGAAATTTGAGCAAATTTGTTGAATTCTTCTGGTTTCTGTTTAGCACAGTTTGTTTTATTATCGTCTGTCTGTCATAATGGTGAATTAGTTATGTCTATGTTAAACTGAAAATATTATTTTATGATGATTGCAGATCACACAGGTTTATGGATTCTACGACGAATGTTTACGAAAGTGAGTTTGTTTAGGTGCTTCATGAAAATTAATCTTAATCCTGTTCCAGGTCTAGCCTTGTAGGCTGTTCAGTATGAACTGCATCATTGCTGCCATGGCAGAAACTCTATGCATGTTCTGTCTGATCCTAGAGTTATGTGGTACTTCTTGTCCTTGTCTCAGTATAATAGACAGACGAGCAAAGTTTTAGTATATGTGGAATCTATTTGGTATCATGTGCCCTTTTTTTCTTTCTGTGCGGTAGTATATAGGTTTTGTGTTGTTTGTATATTAGAGTTCTGTACCTTTTGAACCTATGTGGTAGTACATATCATTAATTCAATATGTTTCAAACAAAACAGTGATATTGTTTGTTAATTTATAGAAGTGAAATTTGCAACAATGATTTGCTACTAGATGTTTGAAATGGAGTCATATTTTTAATTTGTGTTGTTGACCCTTCTTTCAAACCAGGTATGGCAATGCAAATGTATGGAAGATATTCACGGATTTATTTGACTATTTTCCACTGACAGCACTGGTATGTGCTCTGAACTGGGACCTCCTCTTTTTCTTTAAGTTGGTTTGTTCTGTCATTTCTAAGTATCTCTTGTTTTTCTTTATTTTTTTGTTTTGCATTTATTGCATGGTACACTGTTTCAATATGGAAGCCTAGTTTGTTTTTCACCTGTATGATAACTACTGATTGTATATCGCCACCTGCAGACTTGATAGCTGGGAACATATCGATGGGGCATGACTAGTGTCTTTACCTTGTGAAAGAATGCGACATATCATACATTATGTATTTACAGCTGCATAATTGAAATTCCTTGGCCATTTGGGAGTTGTGTGACATCATACCAAGTTGCTAACAGTGATGTTCTCTCTGGTAGATCTTTGGATTTTCAATTGTATGGATGCATTACTTGAATCATGTAAAGTGGTCATCAATAAACGTTTAATGTAGTGCATAACTCTTTTTACTGCAAAATCATTAACTGTACATACAATAACTGCATTCCATCCTCAATAAACCCATATTGTCAGCATTATGCATCTTTGAGCCATGTTAATATTTTCTTTATGTTCTTGAAGGTGGAATCTGAAATTTTCTGCCTGCATGGTGGTTTATCTCCATCAATTGAGAACCTTGATAGTGTGCGTAGCTTAGATCGTGTCCAAGAGGTTCCGCATGAGGGACCAATGTGTGATCTTCTATGGTCTGATCCAGATGACCGCTGTGGTTGGGGCATATCTCCTCGTGGTGCTGGCTACACTTTTGGGCAGGTACTACACTGTCTTGAACTTTTTCAGTTGCAGATGTTTTAATTATAGTTTGTTCATTCTTTCTTTTGTTTTCCAGGATATATCCGAGCAATTCAATCACACCAACAATCTCAAACTTGTAGCTCGGGCTCATCAACTAGTTATGGAAGGATATAATTGGGCTCATGTAAGTTTACTGAACCTTTGGATACTTTATCAGGCGTGTTGTGCAAGTAATATGTCATAATTATTCACTATGCACATACAGGAACAAAAAGTTGTTACTATATTCAGTGCTCCAAATTATTGTTACCGATGTGGGAATATGGCATCCATTTTGGAAGTTGATGACTGCAACAGCCATACTTTTATTCAGGTGATTACTGCTAACTTTATTCTTTACAACAACTTTCCGGCTTCCTTGGTTCGTTAAGTTCATGTAATACGTGCTGGTCATGGCTTAACTGTCAAAGTAAGGTGTTGGAAATCTGAATTAGAATGTTGATAACTTGATTTTGCTCTTTCCTTCATTCAATTCATTTAAAATACGCATTCTGAATTCTGATAGTTAGCTCAATTGCATATCCTGTAGTTGGCTAATCATGTTGGTTTCCTATTGTTGCAGTTCGAACCAGCTCCTAGGAGAGGTGAGCCTGACGTGACACGGAGGACGCCCGATTATTTCCTTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA011381

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA011381&oldid=56204"