BGIOSGA011409

From RiceWiki
Revision as of 09:31, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA011409| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA011409, complete gene.| tag = OsI_101...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA011409

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA011409, complete gene.

LocusTag

OsI_10112

Ensembl Transcript ID

BGIOSGA011409-TA

Ensembl Protein ID

BGIOSGA011409-PA

Length

3463

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:3693772..3697234

Sequence Coding Region

3697199..3697234,3696994..3697090),complement(3696702..3696773,3696515..3696602),complement(3696326..3696430
,3695723..3696223),complement(3695474..3695609,3695157..3695347),complement(3694950..3695058
,3694523..3694671),complement(3694385..3694440,3694127..3694140),complement(3693905..3694045
,3693772..3693804

Genome Context

<gbrowseImage1> name=IndicaChromosome03:3693772..3697234 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:3693772..3697234 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGAGAGATGGCAGCAACACCACCAAGAAGAGCAAGCTGTCATGGTCCAAGAGCTTAGTGAGGAAGTGGTTCAACATCAGGAGCAAAGCCCATGATTTCCATGCTGATGATGTAGCTGCAATTGGGAGGAGAGGAGGTGATGATGAATGGAGGGGAAGCAGCTTCACCCGGAGGGAACCAAGCACAGTCAAGAAGAGCAAAACAGAGAGGTCGTCGAGGAGGAGCCATGAGCGGTCGAGGCGCGGCAAGATCGACCTCGACGCCGCTGAGGCCACCGTAACATTAGACTATAAGATCTTTGTTGCCACATGGAATGTAGGTGGCCGATCACCCCCAAACACCATGAGCCTCGAGGACTGGCTCCATGCTGCACCTCCTGCTGACATCTACGTCCTTGGGTTTCAAGAGATCGTCCCATTGAATGCTGGGAACGTTCTTGGGACAGAGGACAATGGCCCGGCAAGGAGGTGGGTGTCACTGGTCAGAAGAACTCTGAACAACTTGCCGGGTACTAGTGGCAATGGTAGCTTTCGGACGCCATCTCCGGCGCCTGATCCTGTGGTGGAGATGGATGATGACTTTGAGGGATTGTCATCGAGGCAGAACAATGCGTCCTTCTTCCACCGCCGGTCATTCCAGGCCGGACTTAGCCGGAGCTTGAGGATGGAGGGTGACATTCTTGCACCCCAGCCTAGGCTGGAACGGCGGTACAGCGTCTGCGATCGAGCTATCTATGGCCGTCGGCCTAGCGACTACGAGGCCACCTGCCGGTGGGGTGGCTCATCGGACGATGAGAACAACACTGGTGAATCGCCAAGTACAGTTTATTCACCAATGTCGTATGGATACGGTAATCCGTCATCTCTGGAAGAAAGCCATAGACCGGCTGGTCATACTAGATATTGCCTAGTTGCAAGCAAGCAAATGGTAGGATTGTTTCTGATGATTTGGGCCCGGAAAGACATAAGGGATGACATTAGAAATCTGAAGGTTTCTTGTGTTGGGAGAGGATTGATGGGCTACCTTGGAAATAAGGGTTCGATTTCGATTAGCATGTCATTGCACCAAACAAGCTTCTGCTTCGTCTGCAGCCACCTGACATCAGGACAGAAGGATGGTGATGAGATGAGGAGGAATTCAGATGTATTGGAAATCCTTAGAAAGACCAGGTTTCCAATGGTTTATGGACAGTATGAGCGTTCACCAGAAACTATCTTAGAGCATGAACGAATCATCTGGCTTGGGGACCTAAATTACAGAATCGCGCTTTCCTACCGATCGGTGAAGGCCCTCGTGGAGATGCGCAATTGGAAAGCATTGCTGGAGAAAGATCAGTTAAGGATTGAGCAAAGAGGTGGGCGAGTATTCGTTGGGTGGAACGAGGGGAAAATATACTTCCCGCCAACATACAAATACTCGAATAATTCCGACAAGTACGCTGGGGATGACATGAACCAGAAGGAAAAGAAGAGAACGCCTGCATGGTGTGATCGTATTTTATGGTATGGAAGGGGCCTTAGTCAACTGTCATATGTTCGAGCTATTGATGAAGTGGCTGCATTGTTGATGGAGATCAGAGGACCAAGTGAACAGGTTCACATTGAATGTAGCAAAATCCCAGAACAGCACATTGCACATCTTCAGAAGTTCACCAAGCATTTGAATAGTTCGCAAGATCGATTCATTGTGACAAAGCCAAGGTATGGACCATGTTTCACTGAACCCTGA</cdnaseq>

Protein Sequence

<aaseq>MRDGSNTTKKSKLSWSKSLVRKWFNIRSKAHDFHADDVAAIGRRGGDDEWRGSSFTRREPSTVKKSKTERSSRRSHERSRRGKIDLDAAEATVTLDYKIFVATWNVGGRSPPNTMSLEDWLHAAPPADIYVLGFQEIVPLNAGNVLGTEDNGPARRWVSLVRRTLNNLPGTSGNGSFRTPSPAPDPVVEMDDDFEGLSSRQNNASFFHRRSFQAGLSRSLRMEGDILAPQPRLERRYSVCDRAIYGRRPSDYEATCRWGGSSDDENNTGESPSTVYSPMSYGYGNPSSLEESHRPAGHTRYCLVASKQMVGLFLMIWARKDIRDDIRNLKVSCVGRGLMGYLGNKGSISISMSLHQTSFCFVCSHLTSGQKDGDEMRRNSDVLEILRKTRFPMVYGQYERSPETILEHERIIWLGDLNYRIALSYRSVKALVEMRNWKALLEKDQLRIEQRGGRVFVGWNEGKIYFPPTYKYSNNSDKYAGDDMNQKEKKRTPAWCDRILWYGRGLSQLSYVRAIDEVAALLMEIRGPSEQVHIECSKIPEQHIAHLQKFTKHLNSSQDRFIVTKPRYGPCFTEP</aaseq>

Gene Sequence

<dnaseqindica>1..36#145..241#462..533#633..720#805..909#1012..1512#1626..1761#1888..2078#2177..2285#2564..2712#2795..2850#3095..3108#3190..3330#3431..3463#ATGAGAGATGGCAGCAACACCACCAAGAAGAGCAAGGTACATCTTCATTCTTGGTCTCTTCCTGAGCCTCTTCATTGTGATTGTAAATGCCGTGTTTTCTGATTCTTAAATGTGGTGTTTCTTGATGTTTGTCACAACCTGTAGCTGTCATGGTCCAAGAGCTTAGTGAGGAAGTGGTTCAACATCAGGAGCAAAGCCCATGATTTCCATGCTGATGATGTAGCTGCAATTGGGAGGAGAGGTGCGCATGCGTTTGGGTTTGCGAGTGTGTGTTTTTTGCGTCTGTGACCCTGTTTGCTCCAACAGTGAGCTCGCCATGTCTCTCTTTCAGTCTTTCTTTGCCCTGTTTCTATCAACTCTCTTTTGCCACTTGTGGAAAGCACTATGGTTTCCTGGTTTTCCAATATATTTTTTTACAGTTTGTTAGTACACATTGATCAGGCAATCTGTTCTGATTGCAGGAGGTGATGATGAATGGAGGGGAAGCAGCTTCACCCGGAGGGAACCAAGCACAGTCAAGAAGAGCAAAACAGGTTAGCAAACTACAAAAGACTGAACAGTTTCGTGTTTTTTTCGTCTTGATTGTGCCATTTCTCATTGCATTCGCCACTGCCGTGAAATGGTTTGCTCAGAGAGGTCGTCGAGGAGGAGCCATGAGCGGTCGAGGCGCGGCAAGATCGACCTCGACGCCGCTGAGGCCACCGTAACATTAGACTATAAGTAAGCCTCTGCACTCGCAATGTTGGTGACACCCAATTCTTCCCACATTTGGGCTGCGCGTGATCCCTCTTGTTCTTGAAGTAGGATCTTTGTTGCCACATGGAATGTAGGTGGCCGATCACCCCCAAACACCATGAGCCTCGAGGACTGGCTCCATGCTGCACCTCCTGCTGACATCTACGTCCTTGGGTACTTGTTCTTGTTTCATCTCGCATATCTGAATTCGTGTCAGATATCACAACTCTGTTGGTTCGATTTCAGTGATAATTTTGATGTTGTCATTTTGTTCAGGTTTCAAGAGATCGTCCCATTGAATGCTGGGAACGTTCTTGGGACAGAGGACAATGGCCCGGCAAGGAGGTGGGTGTCACTGGTCAGAAGAACTCTGAACAACTTGCCGGGTACTAGTGGCAATGGTAGCTTTCGGACGCCATCTCCGGCGCCTGATCCTGTGGTGGAGATGGATGATGACTTTGAGGGATTGTCATCGAGGCAGAACAATGCGTCCTTCTTCCACCGCCGGTCATTCCAGGCCGGACTTAGCCGGAGCTTGAGGATGGAGGGTGACATTCTTGCACCCCAGCCTAGGCTGGAACGGCGGTACAGCGTCTGCGATCGAGCTATCTATGGCCGTCGGCCTAGCGACTACGAGGCCACCTGCCGGTGGGGTGGCTCATCGGACGATGAGAACAACACTGGTGAATCGCCAAGTACAGTTTATTCACCAATGTCGTATGGATACGGTAATCCGTCATCTCTGGAAGAAAGCCATAGACCGGCTGGTCATACTAGGTAATTTTCGAGCATTAATTTTGTATTCCTCTTTCATGAAATTCAGAGGCCCATTTTGGTTTCGCTTCAAACAAAAAAAATGTGGCTCATGTTATTGTTAATATGGTGTCCAGATATTGCCTAGTTGCAAGCAAGCAAATGGTAGGATTGTTTCTGATGATTTGGGCCCGGAAAGACATAAGGGATGACATTAGAAATCTGAAGGTTTCTTGTGTTGGGAGAGGATTGATGGGCTACCTTGGAAATAAGGTAATTCAGAGTTTCCCAATGTAGTATAGCAAGTGTGATTTTTGACTATTTACCTTGTATGGCTTGATTGCAACCAAGAAACTCTTCTTAGCTTAGGTATTCAACGGTAAAGGATTTGTTTTCCAGGGTTCGATTTCGATTAGCATGTCATTGCACCAAACAAGCTTCTGCTTCGTCTGCAGCCACCTGACATCAGGACAGAAGGATGGTGATGAGATGAGGAGGAATTCAGATGTATTGGAAATCCTTAGAAAGACCAGGTTTCCAATGGTTTATGGACAGTATGAGCGTTCACCAGAAACTATCTTAGAGCATGAGTAAGCAACGAACCTTGGCACTTAGCACAGGCTCTTAAAGCTTGTTCCATATTCATGTGTTATAATTTTGGGGCCTCTTCTTCTGCCTTTTATTTCAGACGAATCATCTGGCTTGGGGACCTAAATTACAGAATCGCGCTTTCCTACCGATCGGTGAAGGCCCTCGTGGAGATGCGCAATTGGAAAGCATTGCTGGAGAAAGATCAGGTGAGGGTTTGTAAACCTTCTTGAGTACAGTATCGGAATGAGTGTGTATGTAGCGTTGAACCCCTAGAAAGCAGTAAAATTCTTGTGCCACAGGCAATCAGGTGCTTTCTGTCTTGTCATTCTTTTACTTTATCATGTTACTAGATTTCTGATGGCTTGGCAAAAAGCTGGGGAGCTGTTGTTTTGAGTTTGAAAAGAAAAGGACATAATGTTTTCATTATAAAATTGATTCTGAAATAATGTATGATCTGAAATATCGAAAAACTTGACACTTTCAGTTAAGGATTGAGCAAAGAGGTGGGCGAGTATTCGTTGGGTGGAACGAGGGGAAAATATACTTCCCGCCAACATACAAATACTCGAATAATTCCGACAAGTACGCTGGGGATGACATGAACCAGAAGGAAAAGAAGAGAACGCCTGCATGGTATTTTGATTAGACACTATTGGTTCCAGAATTTTTGCTGGATTTTGTACAGTAATAGTAAATTTAATGATTTTTTGTGCAGGTGTGATCGTATTTTATGGTATGGAAGGGGCCTTAGTCAACTGTCATATGTTCGAGGTGAATCTCGCTTTTCAGATCATAGACCGGTCTACAGTGTCTTCAGTGCAGAAGTAGAATCAATCAATCAATCATAGTAGAATCCAGAAGATGAGTTGTTCAAGTTCACAACTGGACATTGAGGAATTGCTGCCCTACTCATATGGATATACTGATATTAATCCATATGGATACACTGACCTGAATTTCTACTGAAAGTATTTGAGAACTTTGATTGGCATCCTCTGAATGTTTACTCCTGCAGCTATTGATGAAGTGGTATGATTGGGAGAGTGATCTTAGTTCTAAACTGAAATGTCCGTGTTCCATAGATACTAATCCAATAATTTCCAATGGCAGGCTGCATTGTTGATGGAGATCAGAGGACCAAGTGAACAGGTTCACATTGAATGTAGCAAAATCCCAGAACAGCACATTGCACATCTTCAGAAGTTCACCAAGCATTTGAATAGTTCGCAAGATCGATTCATTGTGACAAAGGTACTTGTGTGATCAATCTCATGCCAAAATATCTACATGACATTTTTGGTGAAGGAGAGTTGTAACGAGCAATTTTGTCATGTTCCTCTCTTTTGTGCAGCCAAGGTATGGACCATGTTTCACTGAACCCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA011409

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA011409&oldid=56232"