BGIOSGA011416

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Revision as of 09:31, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA011416| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA011416, complete gene.| tag = OS03G01...")
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Gene Name

BGIOSGA011416

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA011416, complete gene.

LocusTag

OS03G0158700

Ensembl Transcript ID

BGIOSGA011416-TA

Ensembl Protein ID

BGIOSGA011416-PA

Length

5685

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:3615980..3621664

Sequence Coding Region

3621535..3621664,3619749..3620422),complement(3618749..3618816,3617550..3617913),complement(3615980..3616852

Genome Context

<gbrowseImage1> name=IndicaChromosome03:3615980..3621664 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:3615980..3621664 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGAACCAGGAGGAGGCGGAGCGCGAGGAGCGGGTGGGCCGGGGAGGAGGCGCGCCGGGAGAGGACGCGGAGGAGCGAGTTGAGCGCGACCAGGGAGAGGTCGGGGTGGCGCGGCAGGAGGCCGGCGGTGGTGTGTGGCCTGAATCCCAGAGCTTCAGGGATGATGGCCACCTAGGCGACATCCCGTCGTCATGGCGCGGCACGTGTGTGGAGGGCGAGAAGTTCGACCCGGCCACGGCGTGCAACCGGAAGCTCATCGGCGCGCGCTACTACCTCGCCGGCTTCGAGAGCGAGGTCGGCCCGCTCAACACCAGCGGCGGCGCCGAGTACCGGTCGCCGCGGGACCGCGTCGGGCACGGCACGCACACGGCGTCGACGGCGGTGGGCGCCGTGTCGCCCGACGCCAGCTACGTCGGCGGCCTGGGCCGCGGCGTGGCGCGCGGGGGCGCGCCGTGGTCGCGGCTCGCCGTGTACAAGGTGTGCTGGTTCAAGGACCTGACGGGCCGGTGCAGCGACGCCGACATCCTGGCGGCGTTCGACGACGCGCTGCGCGACGGCGTCCACGTGATCTCGGCGTCCCTCGGCTCGACGCCGCCGCTCATGCCGCTGTTCATGACGAGCACCGAGATCGGGGCGTTCCACGCGATGCAGCTCGGCGTGCCGGCGGTGTTCTCGGCCGGGAACGACGGGCCCGACGCCGCCATGGTGCAGAACGTGTCGCCGTGGGTGATCACCGTCGCCGCCAGCACCATCGACAGGAGGTTCCCGACGGTGATCACGCTCGGCAACAATGTCTCCCTCGTGGGAGAGAGCTTCAATGTGAATGACATGAAGATGAGATTAGTAGAAAGCGGCAGTGTCTTCTCCGATGGGTCTTGCTCATTCGACCAGCTAACCAACGGGAGCCGGGCGGCGGCGTCCGGCAGGATCGTGCTGTGCTTCTCCACCACGACGGCGTCCAGCGGCGTCGCGGCGCTGGCGGTGTACGCCGCCGGCGGCGCCGGCCTGATCTTCGCCGAGACCATCTCCCGCAGGTCGACGCAGGACAACTTCCTCCCCACCGTCCACGTCGACCTCCGCCAGGGCACCCGGATCCTCGACTACATCCGCGGCAGCAGCCGCCCGCCGACCGCGCGCTTCTCCCCGAGCACGACGCTCGTCGGCAAGTCGCCGGCGCCGGCCGTCGCCTACTTCTCCTCCAGGGGCCCCAGCTCCATCTCCCCTCACATCCTTAAGCCTGATGTCACCGCTCCCGGCGTGAACATCCTGGCGGCGTGGCCGCCCATGTCGTCGCCGACGGTGATCCCGCTGGACAAGCGCTCCGTGACGTGGAACTTCGACTCGGGCACGTCCATGTCGTGCCCGCACGTCTCCGGCATCGTCGCCGTCGTCAGGGCCGTGCACCCGACGTGGTCGCCGGCAGCCATCAAGTCGGCGCTGATGACCACGGCATACATGTACGACGACACGTCCGACGTGATGCTGGCCGGCGGGACGCTGAAGGCGGCGGACGCGTTCGACGTCGGCGCCGGCCACGTCGACCCACTGCGCGCGCTGGACCCGGGCCTCGTCTACGACGCCGGCGCGCGCGACCACGTCCTCTTCCTCTGCGGCCTCGGCTACACCAGGTACCAGATACGCCAGATGGTGCTCCCCTCGCCGTCGCTCGACACGAGCTGCGGCGGCGAGGGCGGCGGCGCGGCGCCGCCGGAGTACGACCTCAACTACCCGGCCATCGTGCTCCCGCGGCTCAACGCGACGGTGACCGTGAAGCGGACGGTGACGAACATGGGGCCCCGGAGGGACGCCGTGTACCGCGCCGCCGTCGTCAGCCCGCACGGCGCGCGCGCCGCCGTGTGGCCGCCGGCGCTGGCCTTCTCCCCGTACCGCGACACGGCCTCCTTCTACGTGACCGTCGCGCCGGCGAAGCTGTCGCGCGGCCGGTACGACTTCGGCGAGATCGTCTGGTCCGACGGCTACCACCGCGTCCGCACGCCGCTCGTCGTCAGGGTCACCACCATGCCCGACACCGACACCGGCGTCGACGTTGACGTCGCCGCCGCGCGCACCATGGACACGGCTACTGCCACCCAGCTGCAGGATTCCTAG</cdnaseq>

Protein Sequence

<aaseq>MNQEEAEREERVGRGGGAPGEDAEERVERDQGEVGVARQEAGGGVWPESQSFRDDGHLGDIPSSWRGTCVEGEKFDPATACNRKLIGARYYLAGFESEVGPLNTSGGAEYRSPRDRVGHGTHTASTAVGAVSPDASYVGGLGRGVARGGAPWSRLAVYKVCWFKDLTGRCSDADILAAFDDALRDGVHVISASLGSTPPLMPLFMTSTEIGAFHAMQLGVPAVFSAGNDGPDAAMVQNVSPWVITVAASTIDRRFPTVITLGNNVSLVGESFNVNDMKMRLVESGSVFSDGSCSFDQLTNGSRAAASGRIVLCFSTTTASSGVAALAVYAAGGAGLIFAETISRRSTQDNFLPTVHVDLRQGTRILDYIRGSSRPPTARFSPSTTLVGKSPAPAVAYFSSRGPSSISPHILKPDVTAPGVNILAAWPPMSSPTVIPLDKRSVTWNFDSGTSMSCPHVSGIVAVVRAVHPTWSPAAIKSALMTTAYMYDDTSDVMLAGGTLKAADAFDVGAGHVDPLRALDPGLVYDAGARDHVLFLCGLGYTRYQIRQMVLPSPSLDTSCGGEGGGAAPPEYDLNYPAIVLPRLNATVTVKRTVTNMGPRRDAVYRAAVVSPHGARAAVWPPALAFSPYRDTASFYVTVAPAKLSRGRYDFGEIVWSDGYHRVRTPLVVRVTTMPDTDTGVDVDVAAARTMDTATATQLQDS</aaseq>

Gene Sequence

<dnaseqindica>1..130#1243..1916#2849..2916#3752..4115#4813..5685#ATGAACCAGGAGGAGGCGGAGCGCGAGGAGCGGGTGGGCCGGGGAGGAGGCGCGCCGGGAGAGGACGCGGAGGAGCGAGTTGAGCGCGACCAGGGAGAGGTCGGGGTGGCGCGGCAGGAGGCCGGCGGTGGTGAGTAGCGCCTGCACGGGTAGGGCCGGCGCCGTGGGGGCGGCGGCGGCGGACGGGAGGAGGAGACGCGAGGAGAGGAGGGAGTGGCAGAAAGCGAAGGTTTGCTTGGGGATGTACGGACGCATGCTCGCACGGCGCGCGCCGACCGGCGACGGCGTGAGGCGGAGGATGCCGGGGAGGACGGCGACGGGAGAAAGGGAGAGATAGTGGCGGCAGTGGACGCCGGCGACGGGAGAGGCGGCCCTCCTCGTCGTCCTCGCGGCGGCGGTGGCGAGAGGGAGAGGCGAGCGGCGGCGGCGAGAGGGAGAGAGAGAGAGGCAGCGGTGGACGAGCGGCGACGAGAGAGAGGCAGGGAGGCGGCCCTCCTCGTCGTTCTCGCGGCCGCCGGAGACGGGATAGGCGAGTGCGGCGGCGAAAATAAAAGGAGGGAGAGGCGAGTGCGAAGAAAAAGAGAAGAGGGGCGGGAAAGAGAAACTAGGGTAGGTAAGTAAAAGTAAACATGGGGCTTTGTCGGCTGAGATACTTGGGTGCGTTCGCTGCCTCTGGTTCCCATCCGGAACAGTAAATACGGAAAACGGAGCGGTCCATTAGCACGTGATTAATTATGTATTTGCTAATTTTTTTTCAAAAATGGATTAATTTGATTTTTTTAAGCAACTTTCGTATAGAATTTTTTTTAAAAAAACGTACCGTTTAGCAGTTTGAAAAGCGTGCACACGGAAAACGAGGGAGATGGGTTGGGAAAAAGGGGTTGCAAACACAGAGTGTCTCTATAGCCGGCTGTAAATATATTTTAGTGAGATAAAAGATGAGAGAGCAGAGCAGCGGGCTACAGATCTGTAACTAGCTACAGCACGGACTCCAAAACGCAATGTGTGTATGACAGGTGGGACCATATATTAATAGGATAGTAAGCAACTATTGTATGAATTGGCTATAAATGAATTGGAGCTAATAGTGGGCTATACTATTAAACTTGCTCTTAAGTTGTTTCAGATTTTGAGAAGCTCATCTAGGGTATGATCCATTGAGACATGAGTGTCCTCTAGGATTGGCTTTGATTGAACATGCCCTTACACGATGAATCTGTTCTTTTTCATGTGTTTTTTCAGGTGTGTGGCCTGAATCCCAGAGCTTCAGGGATGATGGCCACCTAGGCGACATCCCGTCGTCATGGCGCGGCACGTGTGTGGAGGGCGAGAAGTTCGACCCGGCCACGGCGTGCAACCGGAAGCTCATCGGCGCGCGCTACTACCTCGCCGGCTTCGAGAGCGAGGTCGGCCCGCTCAACACCAGCGGCGGCGCCGAGTACCGGTCGCCGCGGGACCGCGTCGGGCACGGCACGCACACGGCGTCGACGGCGGTGGGCGCCGTGTCGCCCGACGCCAGCTACGTCGGCGGCCTGGGCCGCGGCGTGGCGCGCGGGGGCGCGCCGTGGTCGCGGCTCGCCGTGTACAAGGTGTGCTGGTTCAAGGACCTGACGGGCCGGTGCAGCGACGCCGACATCCTGGCGGCGTTCGACGACGCGCTGCGCGACGGCGTCCACGTGATCTCGGCGTCCCTCGGCTCGACGCCGCCGCTCATGCCGCTGTTCATGACGAGCACCGAGATCGGGGCGTTCCACGCGATGCAGCTCGGCGTGCCGGCGGTGTTCTCGGCCGGGAACGACGGGCCCGACGCCGCCATGGTGCAGAACGTGTCGCCGTGGGTGATCACCGTCGCCGCCAGCACCATCGACAGGAGGTTCCCGACGGTGATCACGCTCGGCAACAATGTCTCCCTCGTGGTAATTAACCTCGCTCTCGCTGCTTCTCTAATATGGCGTCTACTGTTTGTAGTGGACGCACGATATGACATCACGGCTCTTAATGGTGCACGTCTACGGTAGTTCACTGTCATGTGTTTTATGGTGGTATGGAAATATTTATCTTCGAGTGCAGCAGCCATGATGTTATCAATCTTATCCTCTATTATTTTTTTTGATAATCTTATCTCTCTATTATATTTAAGCTACTCCCTCAGTTTCATATTTTTTTCTAGTCAATTTTTTTATGTTTGATTTAGTTTATAAAAAAATAGCAACATCTATTAAATATATTTTGGTAGTGTGTCCGTTTTGTGTTGAAAATATTGTTATATTTTTTATAAAATTAGTTAAACCTAGATAAGTTTGACTAAGAAAAATTTATAGTGATTTATATTATAAACAAAGGGAGTATTAAGATAGCTCGGAAAAAACACCACGTTTACTTTGGGGTTATAAATTTCCTCATAAATTAAATCAGAGAAAAAGATAAATGTATTGAGAAATCGTGGTTGATCTAGATTATAACAGTCGAGATGTTTGGTACAGTTGTATACAAAATATAATTACGTGTGTGTGTATAAACATAAGCTAGCAAGCTACTAGTTATCTGTAATCTGCACAAAATTGTATCTTACATTATGTGTTTTAGTACTTTTATATATAACGTGGTTTGCTTTGTGTGAAATCAAGTAATAATGTATGAAATGACTGGTTTTTTGCATAGGGAGAGAGCTTCAATGTGAAATATAATTATGTGTGTGTGTATAAACATAAGCTAGCAAGCTACTAGTTATCTGTAATCTGCACAAAATTGTATCTTACATTATGTGTTTTAGTACTTTTATATATAACGTGGTTTGCTTTGTGTGAAATCAAGTAATAATGTATGAAATGACTGGTTTTTTGCATAGGGAGAGAGCTTCAATGTGAATGACATGAAGATGAGATTAGTAGAAAGCGGCAGTGTCTTCTCCGATGGGTAATCTCTCTCTCACACACGTGCAGTTTAATTGGATTAAGTAATGATTATTGTAATTGGCAGAACAGTGAGAGATAATATGGCTTTTCTAGGGTTGAGACTGAGATTTGATACCCAGGTCATGATCAATATGAATAAGCCTGAATTATCTTGAAAACGTTGTTAGATAGTAAAATAATAATAAAAATTATTGGAAAACTATATTAGTGATGACTACTCCTTTATATGGTTCGCAAAATATGCATGGAATTTTAGAACTCTGTTAGAGGAACTTGTGAGACATGAGAACTATGATCCGCAAGGTTAATAACTGGTTAGTGGTTTTGTAGCTGCCATGTTGTTCTTAATTGTGATCACCACTAACTGAACTTTACTATATTTGAGTAGAATCTAACCATTTGCAAGAAAACTGCTCTATTCGAACAGAAATACATAAATCTTCTGAACCAAAATGTGCAAGTTTAACACCCATTACGAACACTTATCAATAGTAATAACAAAAAAAAAACACAAATCAAATACTCCCTCCGTTTCAAGTTATAAGACGTTTTGACTTTGGTCAAAGCTAAAATGCTTTAAGATTGACTAAGTTTGTAAAAAAATAGTAATATTTTTAACCCAAGACAAATTTATTATGAAAATATATTCAATTATTGATTTGATGAAACTAATTTAGTATTATAAAAATTATTATATTTGACTATAAACTTAGTCAAACTTTAAATAATTTAACTCTGAAATGAAACGAGTACTAAGTAAAGCTAGCAAATACATAGGTGTCGTTTCTGCAAATCTGCATCCTTGAATCACACGGTTCCAATTGCTGTATGCCAAGGTCTTGCTCATTCGACCAGCTAACCAACGGGAGCCGGGCGGCGGCGTCCGGCAGGATCGTGCTGTGCTTCTCCACCACGACGGCGTCCAGCGGCGTCGCGGCGCTGGCGGTGTACGCCGCCGGCGGCGCCGGCCTGATCTTCGCCGAGACCATCTCCCGCAGGTCGACGCAGGACAACTTCCTCCCCACCGTCCACGTCGACCTCCGCCAGGGCACCCGGATCCTCGACTACATCCGCGGCAGCAGCCGCCCGCCGACCGCGCGCTTCTCCCCGAGCACGACGCTCGTCGGCAAGTCGCCGGCGCCGGCCGTCGCCTACTTCTCCTCCAGGGGCCCCAGCTCCATCTCCCCTCACATCCTTAAGGTACGCCACCGCATTTTTCATTCTCGAGAGCGTGGATTAAATGGTGAAAATGGCATGATTTTATTGCAGGGATTATTTATACATTTATCGATAAATTTCCTGCTCCCTCTATTTTAGGTTATAAGTCATTTTGACTATCAAAGTTAAAATGTTTTAAATTTAACTAAGTTTAAAGACAAATATATTAATATTTATAATATTAAATTAGTTTCATTAAATCAATAATTAAATTTATTTTCATAATAAAATTTGTTATGTGTTGAAAATATTACTAATTTTTTCTATAAATTTAGTTAAACTCGAAGCAATTTTTTTTAGGAAAAACTTGAAGCAATTTAATTTTGACTAAAGTCAAAACGACTTATAACCTAAAACGGAGAGAGTACAAATTACAGTGCAACTCTATTAAACTTACATGTAACTATAATACAAATTATATATAACTTTTAAAAACATTAATACGGAAACATGCTATTTTCGTGAAGCAGACGTTTCATGACAAATGTCCTCATCCATACGCACACTATGATTTTATTTTTCAAAACTATGTCAAAATTACATATAAGTTATATTTTAATTACATATAAGTTACAATATAACTAAACTATATTTGCATTTGATAAATATTTAGGAGAAAATCGAATATATTGCAAAACCATTTATTCGTGTGTTTTGGTTTGTGATTCGTCGGGTGCAGCCTGATGTCACCGCTCCCGGCGTGAACATCCTGGCGGCGTGGCCGCCCATGTCGTCGCCGACGGTGATCCCGCTGGACAAGCGCTCCGTGACGTGGAACTTCGACTCGGGCACGTCCATGTCGTGCCCGCACGTCTCCGGCATCGTCGCCGTCGTCAGGGCCGTGCACCCGACGTGGTCGCCGGCAGCCATCAAGTCGGCGCTGATGACCACGGCATACATGTACGACGACACGTCCGACGTGATGCTGGCCGGCGGGACGCTGAAGGCGGCGGACGCGTTCGACGTCGGCGCCGGCCACGTCGACCCACTGCGCGCGCTGGACCCGGGCCTCGTCTACGACGCCGGCGCGCGCGACCACGTCCTCTTCCTCTGCGGCCTCGGCTACACCAGGTACCAGATACGCCAGATGGTGCTCCCCTCGCCGTCGCTCGACACGAGCTGCGGCGGCGAGGGCGGCGGCGCGGCGCCGCCGGAGTACGACCTCAACTACCCGGCCATCGTGCTCCCGCGGCTCAACGCGACGGTGACCGTGAAGCGGACGGTGACGAACATGGGGCCCCGGAGGGACGCCGTGTACCGCGCCGCCGTCGTCAGCCCGCACGGCGCGCGCGCCGCCGTGTGGCCGCCGGCGCTGGCCTTCTCCCCGTACCGCGACACGGCCTCCTTCTACGTGACCGTCGCGCCGGCGAAGCTGTCGCGCGGCCGGTACGACTTCGGCGAGATCGTCTGGTCCGACGGCTACCACCGCGTCCGCACGCCGCTCGTCGTCAGGGTCACCACCATGCCCGACACCGACACCGGCGTCGACGTTGACGTCGCCGCCGCGCGCACCATGGACACGGCTACTGCCACCCAGCTGCAGGATTCCTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA011416