BGIOSGA011430

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Revision as of 09:31, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA011430| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA011430, complete gene.| tag = OsI_100...")
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Gene Name

BGIOSGA011430

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA011430, complete gene.

LocusTag

OsI_10059

Ensembl Transcript ID

BGIOSGA011430-TA

Ensembl Protein ID

BGIOSGA011430-PA

Length

8288

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:3376549..3384836

Sequence Coding Region

3384316..3384836,3382646..3382718),complement(3382494..3382550,3382246..3382301),complement(3380808..3381021
,3380553..3380645),complement(3380401..3380481,3380221..3380304),complement(3379521..3379585
,3378270..3378489),complement(3378047..3378135,3376665..3376779),complement(3376549..3376584

Genome Context

<gbrowseImage1> name=IndicaChromosome03:3376549..3384836 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:3376549..3384836 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGATTTCGACGAGTACGACTACTTGGAGAAGACGGTGGAGGGCTCCGGGGCGCCGTCCAACGGCGCCGCCGCGCCCAGATCCGAGGAGAAGGAGCGAAGCTCTCGCCGCCGGAGCGGCGGCGGCGGCGGCGGCGACGAAGAGCGCGACGATGGCGAGCGCAGATCCAAGCGCTCTCGCTCGGAGGAGAACCGCGACCGCGACAAGGACAAGGACCGGGACCGGCACCGCGACCGCGACAAGGACCGGGACCGGCACCGCAGCAGCCGGGAGCGTCGCGACCGCGACCGCGACCGAGACCGGGACGAGAAGGATAGGGAGAAGGAGAGGGACAAGGACAAGGAGAGGAGAAGCCGGGACCGCGAGAAGGAGAAGGAGAAGGAGAAGGAGAGGGAGAGGGAGAGGGAGAGGGAGAAGGATAGAGAGCGGAGGAGCCGGAGCCGGTCCGAGCGCCGCCGCGACGACGAAGAACGTGACCGCGAACGCTACCGCGAGCGAGACTACCGTGACCGCGATGTCAGACGTAGGAAAGAAGAGGCTGGAGAGCCTGAAGCAGATCCAGAACGAGATCAAAGGACAGTATTTGCCTACCAGTTATCTCTGAAGGCGGATGAAAGAGACGTGTACGAATTCTTTTCAAGGGCTGGGAAGGTCCGGGATGTTCGCCTCATCATGGACCGAAACTCGCGCCGTTCTAAAGGAGTTGGGTACATCGAATTCTATGATGTTATGTCTGTACCAATGGCAATAGCTCTTTCTGGCCAGCTGCTTCTTGGTCAACAGGTGATGGTTAAGCCATCAGAGGCTGAAAAGAATTTAGTTCAGTCAAATGCTTCTTCAAGTGGAGCAGCTTCAGGTGGGGCGAGAAAGTTGTATGTTGGAAATCTTCACTCAAATATTACTGAAGATCAATTGAGACAGGTCTTCGAACCGTTTGGTCAGGTGGAGCTTGTCCAATTGCCACTAGATCCACTTACTGGGTTATGTAAAGGTTTTGGTTTTGTTCAGGCAAGTTTTGCACGCCTTGAAGATGCAAAGGCTGCTCAGAGTTTAAATGGGCAACTTGATATAGCTGGACGTGTGATTAAGGCAAGTGTTTCTGCTGTGACGGACCAAGCAGGAGTTCAAGTCAGTGGAGTAACTACTGGAGATTTGGATGATGATGAAGGTGGAGGTTTGGCACTGAATGCTAGTTCAAGAGCTCTTTTGATGCAGAAATTAGACCGTAGCGGCGTTACCACCAGTTTGACTGCTGGGATAGCCGGTACTGGTTTGAACACTTCTGTTGGATTACCACCTGCATCAGTTCTTGGTGCTCCTCCAGTCGCTGCATCTGTACTGCCTACAGTGCCTGGTCTTGGTTCAGTTCCTGGGGTGTCTCTTCCAATTACTACCCAAGCCATTGAGACAGCCCCACCCAGTGAATGCCTATTGCTTAAAAATATGTTTGATCCATCCGTGGAGACGGACCCTGATTTTGATTTGGATATCAAAGATGATGTCCAAGAAGAATGCTCCAAGTTTGGCCAAGTAAAACACATTTTTGTGGACAAGAATACTTCTGGCTTTGTGTACCTTCGATTTGACAGTATAACAGCTGCCATGAGTGCACAGAAAGCTCTTCATGGGAGGTGGTTTGCGGGAAAGATGATTACGGCAACATTTATGTCTCCGCAGCAGTACTCAACGAAGTTCCCGAGCTAG</cdnaseq>

Protein Sequence

<aaseq>MDFDEYDYLEKTVEGSGAPSNGAAAPRSEEKERSSRRRSGGGGGGDEERDDGERRSKRSRSEENRDRDKDKDRDRHRDRDKDRDRHRSSRERRDRDRDRDRDEKDREKERDKDKERRSRDREKEKEKEKEREREREREKDRERRSRSRSERRRDDEERDRERYRERDYRDRDVRRRKEEAGEPEADPERDQRTVFAYQLSLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIALSGQLLLGQQVMVKPSEAEKNLVQSNASSSGAASGGARKLYVGNLHSNITEDQLRQVFEPFGQVELVQLPLDPLTGLCKGFGFVQASFARLEDAKAAQSLNGQLDIAGRVIKASVSAVTDQAGVQVSGVTTGDLDDDEGGGLALNASSRALLMQKLDRSGVTTSLTAGIAGTGLNTSVGLPPASVLGAPPVAASVLPTVPGLGSVPGVSLPITTQAIETAPPSECLLLKNMFDPSVETDPDFDLDIKDDVQEECSKFGQVKHIFVDKNTSGFVYLRFDSITAAMSAQKALHGRWFAGKMITATFMSPQQYSTKFPS</aaseq>

Gene Sequence

<dnaseqindica>1..521#2119..2191#2287..2343#2536..2591#3816..4029#4192..4284#4356..4436#4533..4616#5252..5316#6348..6567#6702..6790#8058..8172#8253..8288#ATGGATTTCGACGAGTACGACTACTTGGAGAAGACGGTGGAGGGCTCCGGGGCGCCGTCCAACGGCGCCGCCGCGCCCAGATCCGAGGAGAAGGAGCGAAGCTCTCGCCGCCGGAGCGGCGGCGGCGGCGGCGGCGACGAAGAGCGCGACGATGGCGAGCGCAGATCCAAGCGCTCTCGCTCGGAGGAGAACCGCGACCGCGACAAGGACAAGGACCGGGACCGGCACCGCGACCGCGACAAGGACCGGGACCGGCACCGCAGCAGCCGGGAGCGTCGCGACCGCGACCGCGACCGAGACCGGGACGAGAAGGATAGGGAGAAGGAGAGGGACAAGGACAAGGAGAGGAGAAGCCGGGACCGCGAGAAGGAGAAGGAGAAGGAGAAGGAGAGGGAGAGGGAGAGGGAGAGGGAGAAGGATAGAGAGCGGAGGAGCCGGAGCCGGTCCGAGCGCCGCCGCGACGACGAAGAACGTGACCGCGAACGCTACCGCGAGCGAGACTACCGTGACCGCGATGTCAGGTGCCGATTCATGACCTTACCCACCTGTATTGGTGCCGCTGTGTTATGAACTGAGTGGTCTTAACGGACTTGCCGATTGCTTGATTCCAAAAAGCTGCCATCCATAATCTCGTTTTCACCACGTTTGATGCGCTTAGGCATCGTTGTCTCCAACAAAATCAATTTTATTTTTCTACACTTGGTCATGATATATTGTAATATTCGCGGAGGATTGCATGGGATGGGGATAGCAACATAGTTTGAGTGTAATGAGTATATTATTATGGGGTGCATTGGGACTTTTCTTCTTATTTGTACAAATGCAGCATCAATTTGTAAATTGCGTGTAATAGTTCTGCTTTCATCGTTTAGCATAATTTATAGCAGATGATTTGATAACTCTTCTATCAGAGTATTCCTATTGCTTCCTATAATTCTACTGCTATTAACAGTTTTTTGTATTATATACCTCGACTTCTTGTAAATTCCTACAATTTGAACATTAGTATGGGTACCTGCAGATTCAATTTGCTAGAGCCATCTTCTGTGGTCTTGATGTTGAGCCTGACCTAGGATATCAGGTGATTTTTTTTTAATATTACTATTATTAGATAGGAGTTAGTGTTCTATGTTAGGGTTACTATGATAGGGAAATTCAAGATGGATGATACAATTTATGCTTTTGCAGTGGTGGTCTGAGAGCAATGATGGTGCCATCCACGCATAAAGTTTTGTTGCATCCAGAACATGGAGCTGAACTGTACTTCTTGTGTTGCAGAAATGCTGGTGAGCGGTGTTTTGGGCTTCTTCACTGAAGCATTGTGTCTTATTGTTAAGGGGACTCAGTATTCGGCCCGCTGCACAAACAACCCTTATTGCTTTTTACCCTTTTCAGGAGATGTCAACTTTGAGTTGTCAGAGTTAAGAGTTGTGCGAAACCTGGTTAGATGATGTTTCAGAGCCCACTCACCGTTCTAAACCGCATGCATCCATGCAGAAGGGGGGGGGGGGAGCAGCTGCATGCATGCATGTGCAACACTGGGTCAAATGGTTTAGTAAAACTGTTTTTGTTCACCCCCAATCATGGTGATGCATGTCTATGCCTTACAACAAAGGGCTTTTTACACTACATTTTTTGCTTATCTCCAAGGCATGTCTTGTTACGATGTGACTTGATAGAATGTTGATGGGCCACATATTCTAATGAAATGTCTAACTCGATTAGTCAGTTATGATCTATAATGATGGCTGAACTATGCTCAGTGAACGTTGAAAGTTATTCTTCCTGGACCCCTAGATCTGACACATTCATTTCTTCAATTATTATTATTGGATAACTTGTTGGGTAGTTAAGCGTTGTGATCTTAACAAATCTTGTTATTTAGGTGAGACCGTTAGAGGTAGGGAGAGAGGATTGAGTGGTGATATAAATTTATATTAGTATGGATGGACACTAACATGTAGGGAATGATTGATATTGAGAAACTGAGGTAGTATTCTTTTTATGAGGAACTCCATTACTGTTGGAGCTGATGATTAATGTGGGCTTGTATTATATATATATTTTTCTATATTTTCGTATCAATGCTTATGACAGTTTTGCTTATTGTCTGTGCAGACGTAGGAAAGAAGAGGCTGGAGAGCCTGAAGCAGATCCAGAACGAGATCAAAGGACAGTATTTGCCTACCAGGTGCATTTTAGTGTAACATTTGAATTTCACTTTGTGACCAGGAAAATGCTGAAGCCTTTTCTATTTGAAACTAATGTTTGTGAGCATAATCACAGTTATCTCTGAAGGCGGATGAAAGAGACGTGTACGAATTCTTTTCAAGGGCTGGGAAGGTGATCCTCACTTTGAATTTGCTTGTATCCTCTTTAGTAGTAAAATATTTTATGATTAGCAGATGAACATTTACGGCCTATAATTGTGGTTTGGTGGGAAAAAAAGTTCTTCTGATGGTTGCTGCGTATTTGTTCAGTCTCTTGTCATTGCATCAAATCAATAACTGTGCTGACATTGATTACTTTTTGTAGGTCCGGGATGTTCGCCTCATCATGGACCGAAACTCGCGCCGTTCTAAAGGAGTTGGGTGAGTTTTTATAGTGAATTCTGTGCAACATATCAGATCGTTGTTTTATTTGTTACCTGTTTTTTTTCCTTGAGTTGCTAAAAGAGGGGTTTTATTTTCTTAGTGGCTTGGAATATCTAGCAGTTTGCTTATAATAGCCAAATATATCTATTGTTTACACATTTGATGGGAGGGAGGCAGGGTGTTACTTGTGTTTCCTGTTTTAGAATCTCCAAAAGATCTGATTAGACTTTGGTGTTCTACTGATTGTTACCTTGGTCGTTTGGTGCCTCCCATGGATTCATAACCTGAGATCTAGAGAGGGAGGGTGGGGCTTGATTTTAGGTTTTACAGTATCGGAATGAACTCGTTAGTTTGTGCTCATAATGCTTCTGGTTTTGTGTCCAAGTGGCAATATTGACTTACTGAGAATGAGGGAGATGGACCCACTGTTTTGGGGTTTTAGTCTGTGTTGCTAAGCCATTTGTTTGTAGCAAGCAAATAGCAAATGCCTCCTAGCTTTCTGTAAAGCTGCTCCAGTTTTGTGCTCATGTGGCAAATATTGTGATTTAGGTTGTTGGATTCAATGTTAGGCATGTTTGCACGTGAGTGTAGGTGTGCTGTAAGGTCCATTGTTGGTGGGCAACAAGGGAAGGAGATGAACTGAATCAGAAGGTATGAACCAGAGTGGAGTAGATGTCTCACAAGAGGCTGCAAAGAGATCAAATGTGTGAGAATTGTTTTTTGGGTGGGGGGTGATTGGTAGGGTATTTCAAATGTTAATGAATACCGACCATATTTGTCAATATTTTTCTAGTTGCTGTTATGATTACACAAGCATTTTTAAACTGTAGCTACATCTACGATTTATTATGGGGGAATATATTCACCGATTTTTCATACTCGGCAGGAATGTTTATAATTTGGTGTATCTACTGGGATAATCAGCTACTTATGATAAGATGGAATACAAGATCTTTTTGGGGGAAGTAAGCAGCGTGGAACATCAAACATAGCAATTCCACATTATTGGATGCCATTTCTGCGCATTTTCATATGATTTTGGTCGGAGGAATGTGCAATTAGTTTGTGCTGGGAAAAATTAATTCTAAACCTGTTTGAAAATGTTTGATATGCAAGATTTTATGTGAATAACTGAATATCTTTTCAAAAGATTGAACGAATGCGGCCTAATTCTATCGGCGACATGATATCCTGATATTTATTATGCTTTTGCGTTTCCAGGTACATCGAATTCTATGATGTTATGTCTGTACCAATGGCAATAGCTCTTTCTGGCCAGCTGCTTCTTGGTCAACAGGTGATGGTTAAGCCATCAGAGGCTGAAAAGAATTTAGTTCAGTCAAATGCTTCTTCAAGTGGAGCAGCTTCAGGTGGGGCGAGAAAGTTGTATGTTGGAAATCTTCACTCAAATATTACTGAAGATCAATTGAGACAGGTGATGCCGACAAATTGTTTTTTAGATATGAGTTGGCTGTGCTTTTGGAAGAAAATTTCCCTTGGAGTTCATAATGGAAAACATATTACTTTTATGGGGTAGAAGAATTACTATGGCATCCTTGTTATGCATATATAGAGTTTAATGAATTCTCTTTACCAGGTCTTCGAACCGTTTGGTCAGGTGGAGCTTGTCCAATTGCCACTAGATCCACTTACTGGGTTATGTAAAGGTTTTGGTTTTGTTCAGGCAAGTGTTTGCTTATTAAGCAATTCTTTTGTTTTTGTGGAGAGTTCTGTGTGGCTGACTTCTGTTTCATCATGTAGTTTGCACGCCTTGAAGATGCAAAGGCTGCTCAGAGTTTAAATGGGCAACTTGATATAGCTGGACGTGTGATTAAGGCAAGTGTTTTCTTCAGATTTATTAGAATACATGTTGTTTTCAAGCTATACATCTCAAATATAAGGGTTCTGCCTGACACTATGCTAAACTGCTGTAACCAGGTTTCTGCTGTGACGGACCAAGCAGGAGTTCAAGTCAGTGGAGTAACTACTGGAGATTTGGATGATGATGAAGGTGGAGGTTTGGTGGGTGCCATTTCTGGAGACACATCGAGAACTGGAAATTCACTTATCATATTTGATATATATATATCCTCATTTTCTTTTAAGTACAATTACTTGGGACATAGCATGCTTTTGCTTGCACCTCGCCTCAATCTTTTTAGAGAAGATTTTACTCCCTCCATCCCAAATTGATCACCATATATGCTTATGCACCAAAACCAATGATAATTTAATTCACATCAATCAAGACATCATGCACACATTCTCCCACAGTGCATGCATTGATTAAAACACCATGCCAATTACACCCTTAGCATGCACACATTCTCCCTTGCTGCATTAATTGTATTCCGATGAAATCCATGTTCATGTGGTTATATGATGATCAATTTGGGAAATTTTGAATTTCATTATATGATGATCAATTTGGGAAGGAGGGAGTAATGTGCAAGAACTTTACCATATGATGGTTTAGTATACACTGAGCACTCTGCATACCTAGCATATCTACTATAGCAAGCCTTTATTGCATGATCATTTGTTCATTCTTAGTTGGTTAATGTTTGAGGCTGTTTTTAAATGCCACATACTTATGCATATTGCAACAGTATCTCAATTGTGTCTGTGATGACTTTGCTGAATGCTGATGTATGCAGGCACTGAATGCTAGTTCAAGAGCTCTTTTGATGCAGAAATTAGACCGTAGCGGCGTTACCACCAGGTATATATATGTGAGCTTAATGGGTTAAACTATCTTTTTGGTGCCCTCGTGGCCATGTCAATCTAACTACATCAGTCATATTCAATCTTACATATAACCTTTGTCCCATAAATACTCCCTCTGTTTTTTAATAGATGACACCGTTGACTTTTGGCATGATGTTTGGCCATGTTGAAAAAAATTATATAAAAATGTCATTTATTTTGTTGTGACATGTTTTATCATTAAAGAAATCTTTAAGTATGACTTATAGGCATATTTACACTAATTATACCAAAAGTCAACAGGGTCATCTATTAAAACAGAGGTAGTATAAATAGGAAGAAAAAAAGGACCATGATACCCCTCTTTAAATGTGGTATGGACGAGAGGTTGGTTAGGGGTTAGCTCGTTTGATGGCACAAGTAGTACTATAGAATCCCTTATATTTTGGGATGGAGGTAGTAGCTTGTTTAATAGTGTGTTGCTCAGTCAACCAGGTAATTTCTGTAATTTGTTGATGGTACTGCAGAGCCTTAAGTTCATATTTAGAATACTGGGATGTCAAATGTCCAGAACGTCAATTATCTTGCTTGTTAGAGTTGCTGTCATTTGTATCAAAATCATTCGTTATTGACCTTTACTATATTATCGTCAGGATTCATCCACCACTACATCAACACTGTTTCCATATGTATATAGCTTGTCAAGGTCATTCTCCAAGGACCTCTTCCAATTCTTTGGTGTACATCGCTGTTGTTAATATTTTGTTTACTCCATTTCTAACATCAAATGTCAATCGCATTGACTACTACAAATTTCAAGAGAGTGAACCATGATTGAGAAATGCCGAGAACATGCCACAGTACCTTATTATTCTTATGGTATCATCAAGTTATCTTGACAAGACATGTTAGCCATAACCTTTTAATTTTTCACTGCATTTCCAATTCAAAAAATGTGCGTGGCATATATTAACTACAAATAGTTGGTACTGGTTTGAACACTTGGCCTTCCTCTGAATTTTTTACCTTCCTTTTGTCTGTCTGCAGTTTGACTGCTGGGATAGCCGGTACTGGTTTGAACACTTCTGTTGGATTACCACCTGCATCAGTTCTTGGTGCTCCTCCAGTCGCTGCATCTGTACTGCCTACAGTGCCTGGTCTTGGTTCAGTTCCTGGGGTGTCTCTTCCAATTACTACCCAAGCCATTGAGACAGCCCCACCCAGTGAATGCCTATTGCTTAAAAATATGTTTGATCCATCCGTGGAGGTTTGTTCTTACTACTGCATTCTTTTTTTTTTGGGTTCACCAACAGTCCATACCTTTTTTAAAAAAAATCTTTACTGGTTTGTATCCTTTCTGTTTGGTTGATTAAAAACTAATTGAAACTTACTTTATTGCAGACGGACCCTGATTTTGATTTGGATATCAAAGATGATGTCCAAGAAGAATGCTCCAAGTTTGGCCAAGTAAAACACATTTTTGTGGACAAGTAAGTTTGTTCAACACTAATTACCAGTCAACAAATCTGTAACAGCTTGCATACGGCATTATTGTAACCATCTACAGCTTCCCAGTACATAAGTCCCAACACAATCTAGTAATCTAGTAAAATATAGTATTCAATAGTTACCAGCATGTACTTGTAGAGTGTTAGGGGAATAATTCTCTATTCTCTGCTAACATATCCAAAGGCTCTGTTTACTGTGCTTTTATCTTTCAATTTTCTTGTGTACTGCAACTTCAGAAAGGTGCAGTGTACTTTTGCTCCTCGTACTGCAGTGCAATTATTGCCGTGTGCAAACCTGATTTACCTTGAAAAGCCTGCCAATTTTACAAGGATAGCCTAAGGCCATGTACAACGCTTGACCCTGGCCTGTGGTCTCAAACCTCCACATCGGACGGGTGCATCCGTGTCAGTGGGGACCGTGGCTCTGCAGGCCGATTCCACGCTTGCAGAGGAACCGGTCGAAGCGCCGTGCCTGGGCTCGGGAGCCGCGAAGCCACAGCCCAAGGCCACGCGTTGGTGGAGCCGGAGCCCCGTGCTTCGCCTCGTCCGGTCGGTCGCCTTGGTAGTCGTCGCTGCTCACCGCCGCCACCGCTGCTCCCCGCCGCCGCCAGATGCGAAGAGGAGCGCCGCCGATGACACCACTGTTCCCCGCCGCCGCCAGATGCAAAGAGGAGCGCTGCTCCCCGTCGCCGCAGGATCCGGCGAGCCCGCGCCTGGATCCGGTGAGCCCGTGCCCGGATCTGGCGACCTTGTGCGCAGGGTGGCGGCGAAGGAAGTAGGATGCAGCGGAGGAGGGCGTGTGCGTGGCGGAGGAGGAGAGGATGGCGCGGGGGAAGAACGCGGCGGTTGAGAGGAGGAGCGGCGCTGTGGCGGCGCACGAGAGGAGAAGTGGAGGCAACGAGAGGAGGCGTTGGAGAGGAAGAGGATAAGGCAGAGCCGGTTGGTAGGAGGAGAAAATAAAGGGAAGAGGATTGGAGAGGCTGACAGTGGGTCCATATATAGATTAGGGGTATCTATTTCTTTTTGTTGTTAGAAGGACTAAAATAGTTAATTTTATAATAACAAATATCATAGGGACTAACACAAATAGGTAGGGGCTGAAACACAAAATATACTCTGCAGTGGTCTCCATTGTAGATATCGTGGTTTTTGTGTGGCCTTATCCTATGTGGCAACCTGAGACCACAGTTGCTTGTAGCTTGCATTGTACATGCCCTAATTATTTGGTATTGTTGCAACTATTTTGCAGGAATACTTCTGGCTTTGTGTACCTTCGATTTGACAGTATAACAGCTGCCATGAGTGCACAGAAAGCTCTTCATGGGAGGTGGTTTGCGGGAAAGATGATTACGGCAACATTTATGGTATGGAATACAACATTTAATTGAGGTCAATCTTCCCTTTCTAAATTTTGGGTTTGCTGATTGCTCTTTTGCTGTGTCAGTCTCCGCAGCAGTACTCAACGAAGTTCCCGAGCTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA011430

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