BGIOSGA011468

From RiceWiki
Revision as of 09:32, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA011468| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA011468, complete gene.| tag = OJ1172F...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA011468

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA011468, complete gene.

LocusTag

OJ1172F09.9

Ensembl Transcript ID

BGIOSGA011468-TA

Ensembl Protein ID

BGIOSGA011468-PA

Length

2172

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:2934530..2936701

Sequence Coding Region

2934530..2936701

Genome Context

<gbrowseImage1> name=IndicaChromosome03:2934530..2936701 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:2934530..2936701 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGATCGCCGCGCTAGCATGTCTAGCCGGAGCGTGCTCGTCCAAATCCCGGACCAGCTGCCGACGCTGTTCGAGCCGCAGAAGGCCATAATGACGCCGAACATCCGCGCGGGCGTCGACGACGACGACGACGGCGACGCGGCGCCGCCGGAGCGGCGTCTCACGGTGCTGGCCCTGCAGCTCGCCGTCCTCGAGAAGGCGGCGAGCAGGCTCGGCACGCTGGGGTTCATCTGGGCGACGGTGGTGCTGCTCGGCGGCTTCGCCATCACGCTCGGGCGCACCGACTTCTGGTGCATCACCGTGCTGCTGGTGGTGGAGGGCGCCCGCATCCTGGGCCGCAGCCACGAGCTGGAGTGGCAGCACGAGGCGACGTGGCGGTCGCCGGTGTCGTCGGCGGCCGGCCTCGTGTTCTACTGGATGCAGCTGCTGTCCGCGTCCGCGTGCGTCGCGCTCTCGCTCGTCCGCCTCGTCCACCAGCGCTACGGCGGCAGCGCCGACGCGCGGACCAACCGGAGCTCGGCGCTCGACATCTTCTACGGCCTCGCGCTCGCCGAGGCGCTGCTGTTCCTCGTCGAGAAGGCGCTGTGGCAGTGGCGGGTGGGGCACCGCCGCCTGATCGAGCGCGTCGCCAAGGAGTGCCACCTCGCCGGCGCGTGCGGCGCGGTGGCCGTCCGCCGCTTCTTCTACGATTCCTACTCCCGCTGCCTCAACGGCAGCATCTTCGACGGCCTGCACATGGACCTCGTGTCCTACGCCGACGACCTGCTCACCGCCGGCTCCTACGACGAGCAGCGGCTCGGCGCCTCCGTCCTCGTCGCGCTCGCCGAGTCCGACCGCTTCGCCGACGCCACGCTGCGCAGGATCGGCACGTCGGCGCCGGTCACCGAGCGGCTCATCGAGATGCTCAGCTGGAAGAACTCGTCGGAGAAGGGCGTCCGCCGGTCGGCCGCGGTGGTCGTCTCCATGCTCACCGAGGGGAAGCTCAATGCTCTCCGCGTCACCGGCATCCCCGGCGCCATCGAGTCCGTCGCGTCGCTGCTCTACGCCGACCTCGACGAGCTCAACCTCCTCGGCCTCTCCATCCTCAACAAGCTGGCGCACGACCACGACATCTGCGACAAGATCGGCAAGACGAAGGGACTCCTCGACAAGATCATCTCCTACTCGAGCATCGCCAGTGCACCTGCGACGGCCGCGCCCACCGACACGAACCTCATGGCGGTGAAGCAGTCGCTCCGCGTGGTGAAGAGGCTGGCTAGCACGACGGGCACCACCGGCAAGCTCCTCCGGAGGGAGCTCTCCGGCATCGTGTTCACGGTGAGCAACGTCAGGGATGTGCTGCAGCAGCGCGACGGGAAGGCCTGGAGCGAGCTGCACCAGCTGGCGATCGAGACCCTGACGAGCCTCACCATGGACGAGGAGGCGAGGGAGATGATCGGCAGGACGGGTGGCGTGGTGAGCGAGCTGGTGGCGATGTTCTTGCCGGCGACGGAGGCGGTCGGAGACCGGCCGGCCGACGCGGTCCGTGTGGAGGCCGGCGAGGCGCTGGCGATGCTGGCCCTCGACAGCCGGAGGAACTGCGGCGCCATCATGACGGCTTGCGGCGGCGGAGTTGAACGGCTCGTCGAGGCGATGAGCGACCCCGTCGTCATCGTCGGCGCCGCGAGGATCCTCCGCAACCTGTGCACCTACGCCGGCGACGAGTGGCGGCTTCCGCTGAGAGGAGTCGCCGCCGGCGCCACCAAGGTGCTGAGGACAATCATGGCCGAGAAGGGCAAGGTGCTCAACATCTTCCTGGGCCTCGCGGCGCAGATGCTCCGGTTCATGGAGCCGGAGGAGCTCCGCGCGAGCCTCGCCGCGGCGAGGGTGACGGACGCGGCGCTGGCGAAGACGATGGTGCAGGTCCTGAGGGAGTACAGCCGGCCGTCCATGGTGGTGCCGCGGATCCGCCGGTACACCATCGAGCTCGCCGTCGCCATGATGCGGTCGGACAAGCGATACGTGGCGCTGTTCGTTGAGCTGGGAATGGAAGACCAGCTGCGGCGCGTCGCGGGCACCACGTCGGAGCTCGAGTGCTTCAACGTCTTCTCCGGCAGCGTCGGCCTCAGCCGCCGCGGGGTCAGCGTCTGCGCGGACGTCGAGGCGGCTCTGGAGTTGATGAGGCAGGACTGA</cdnaseq>

Protein Sequence

<aaseq>MDRRASMSSRSVLVQIPDQLPTLFEPQKAIMTPNIRAGVDDDDDGDAAPPERRLTVLALQLAVLEKAASRLGTLGFIWATVVLLGGFAITLGRTDFWCITVLLVVEGARILGRSHELEWQHEATWRSPVSSAAGLVFYWMQLLSASACVALSLVRLVHQRYGGSADARTNRSSALDIFYGLALAEALLFLVEKALWQWRVGHRRLIERVAKECHLAGACGAVAVRRFFYDSYSRCLNGSIFDGLHMDLVSYADDLLTAGSYDEQRLGASVLVALAESDRFADATLRRIGTSAPVTERLIEMLSWKNSSEKGVRRSAAVVVSMLTEGKLNALRVTGIPGAIESVASLLYADLDELNLLGLSILNKLAHDHDICDKIGKTKGLLDKIISYSSIASAPATAAPTDTNLMAVKQSLRVVKRLASTTGTTGKLLRRELSGIVFTVSNVRDVLQQRDGKAWSELHQLAIETLTSLTMDEEAREMIGRTGGVVSELVAMFLPATEAVGDRPADAVRVEAGEALAMLALDSRRNCGAIMTACGGGVERLVEAMSDPVVIVGAARILRNLCTYAGDEWRLPLRGVAAGATKVLRTIMAEKGKVLNIFLGLAAQMLRFMEPEELRASLAAARVTDAALAKTMVQVLREYSRPSMVVPRIRRYTIELAVAMMRSDKRYVALFVELGMEDQLRRVAGTTSELECFNVFSGSVGLSRRGVSVCADVEAALELMRQD</aaseq>

Gene Sequence

<dnaseqindica>1..2172#ATGGATCGCCGCGCTAGCATGTCTAGCCGGAGCGTGCTCGTCCAAATCCCGGACCAGCTGCCGACGCTGTTCGAGCCGCAGAAGGCCATAATGACGCCGAACATCCGCGCGGGCGTCGACGACGACGACGACGGCGACGCGGCGCCGCCGGAGCGGCGTCTCACGGTGCTGGCCCTGCAGCTCGCCGTCCTCGAGAAGGCGGCGAGCAGGCTCGGCACGCTGGGGTTCATCTGGGCGACGGTGGTGCTGCTCGGCGGCTTCGCCATCACGCTCGGGCGCACCGACTTCTGGTGCATCACCGTGCTGCTGGTGGTGGAGGGCGCCCGCATCCTGGGCCGCAGCCACGAGCTGGAGTGGCAGCACGAGGCGACGTGGCGGTCGCCGGTGTCGTCGGCGGCCGGCCTCGTGTTCTACTGGATGCAGCTGCTGTCCGCGTCCGCGTGCGTCGCGCTCTCGCTCGTCCGCCTCGTCCACCAGCGCTACGGCGGCAGCGCCGACGCGCGGACCAACCGGAGCTCGGCGCTCGACATCTTCTACGGCCTCGCGCTCGCCGAGGCGCTGCTGTTCCTCGTCGAGAAGGCGCTGTGGCAGTGGCGGGTGGGGCACCGCCGCCTGATCGAGCGCGTCGCCAAGGAGTGCCACCTCGCCGGCGCGTGCGGCGCGGTGGCCGTCCGCCGCTTCTTCTACGATTCCTACTCCCGCTGCCTCAACGGCAGCATCTTCGACGGCCTGCACATGGACCTCGTGTCCTACGCCGACGACCTGCTCACCGCCGGCTCCTACGACGAGCAGCGGCTCGGCGCCTCCGTCCTCGTCGCGCTCGCCGAGTCCGACCGCTTCGCCGACGCCACGCTGCGCAGGATCGGCACGTCGGCGCCGGTCACCGAGCGGCTCATCGAGATGCTCAGCTGGAAGAACTCGTCGGAGAAGGGCGTCCGCCGGTCGGCCGCGGTGGTCGTCTCCATGCTCACCGAGGGGAAGCTCAATGCTCTCCGCGTCACCGGCATCCCCGGCGCCATCGAGTCCGTCGCGTCGCTGCTCTACGCCGACCTCGACGAGCTCAACCTCCTCGGCCTCTCCATCCTCAACAAGCTGGCGCACGACCACGACATCTGCGACAAGATCGGCAAGACGAAGGGACTCCTCGACAAGATCATCTCCTACTCGAGCATCGCCAGTGCACCTGCGACGGCCGCGCCCACCGACACGAACCTCATGGCGGTGAAGCAGTCGCTCCGCGTGGTGAAGAGGCTGGCTAGCACGACGGGCACCACCGGCAAGCTCCTCCGGAGGGAGCTCTCCGGCATCGTGTTCACGGTGAGCAACGTCAGGGATGTGCTGCAGCAGCGCGACGGGAAGGCCTGGAGCGAGCTGCACCAGCTGGCGATCGAGACCCTGACGAGCCTCACCATGGACGAGGAGGCGAGGGAGATGATCGGCAGGACGGGTGGCGTGGTGAGCGAGCTGGTGGCGATGTTCTTGCCGGCGACGGAGGCGGTCGGAGACCGGCCGGCCGACGCGGTCCGTGTGGAGGCCGGCGAGGCGCTGGCGATGCTGGCCCTCGACAGCCGGAGGAACTGCGGCGCCATCATGACGGCTTGCGGCGGCGGAGTTGAACGGCTCGTCGAGGCGATGAGCGACCCCGTCGTCATCGTCGGCGCCGCGAGGATCCTCCGCAACCTGTGCACCTACGCCGGCGACGAGTGGCGGCTTCCGCTGAGAGGAGTCGCCGCCGGCGCCACCAAGGTGCTGAGGACAATCATGGCCGAGAAGGGCAAGGTGCTCAACATCTTCCTGGGCCTCGCGGCGCAGATGCTCCGGTTCATGGAGCCGGAGGAGCTCCGCGCGAGCCTCGCCGCGGCGAGGGTGACGGACGCGGCGCTGGCGAAGACGATGGTGCAGGTCCTGAGGGAGTACAGCCGGCCGTCCATGGTGGTGCCGCGGATCCGCCGGTACACCATCGAGCTCGCCGTCGCCATGATGCGGTCGGACAAGCGATACGTGGCGCTGTTCGTTGAGCTGGGAATGGAAGACCAGCTGCGGCGCGTCGCGGGCACCACGTCGGAGCTCGAGTGCTTCAACGTCTTCTCCGGCAGCGTCGGCCTCAGCCGCCGCGGGGTCAGCGTCTGCGCGGACGTCGAGGCGGCTCTGGAGTTGATGAGGCAGGACTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA011468