BGIOSGA011492

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Revision as of 09:32, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA011492| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA011492, complete gene.| tag = OS03G01...")
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Gene Name

BGIOSGA011492

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA011492, complete gene.

LocusTag

OS03G0136900

Ensembl Transcript ID

BGIOSGA011492-TA

Ensembl Protein ID

BGIOSGA011492-PA

Length

6396

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:2408528..2414923

Sequence Coding Region

2414659..2414923,2414445..2414552),complement(2413899..2414059,2413279..2413371),complement(2412765..2412950
,2412507..2412668),complement(2411994..2412138,2411777..2411919),complement(2411644..2411700
,2411483..2411562),complement(2411329..2411404,2410838..2411023),complement(2410498..2410565
,2410302..2410420),complement(2410103..2410224,2409812..2409910),complement(2409220..2409699
,2409014..2409112),complement(2408690..2408932,2408528..2408596

Genome Context

<gbrowseImage1> name=IndicaChromosome03:2408528..2414923 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:2408528..2414923 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCCTCCCCTCACGAGCGCCCTCCTCTCCCGCTCCTCCTCTACCCGCATCCCCGCCGCGGCGGCGGCGGCGGCGGTGATCTCGAATCCCGCGGGCGCCGCCGCGTCGTCGTCGTCGCCGTCACCGCCGCCTCCGAGCTCTCGCCCCAGGCCGGCGTCCCCCTTCGCGTCCGGCCTCGCTGGCCGCATCTTCGGCGGCCGCCGCGCCGCCGCGCGCTCCTCGTCGTCCGCCGCGGCCGTCTTCGAGCGGCGCTTCGCCTCGGCGGCGGCGAAGAACTCGTACGATGAAATCCTGACGGGCCTCGCGAAGCCGGGAGGCGGAGCGGAGTTCGGGAAATACTACAGCCTGCCCGCGCTATCCGATCCGCGGATCGAGCGACTCCCTTACTCGATAAGGATTCTTCTCGAGTCGGCAATCAGAAACTGTGATGAGTTCCAGGTCACCGGGAAGGACGTTGAGAAAATCCTGGACTGGGAGAACAGCGCACCAAAGCAAGTCGAAATCCCATTTAAGCCAGCCCGTGTCCTCCTCCAGGATTTCACTGGTGTTCCAGCAGTGGTTGATCTTGCGTGCATGAGGGATGCTATGAGCAAACTTGGCAGTGACCCAAACAAAATTAATCCTCTGGTACCTGTAGATCTTGTTATTGATCATTCAGTACAAGTTGATGTGGCAAGATCAGAAAATGCTGTTCAGGCAAATATGGAGCTAGAGTTCCATCGTAACAAGGAGAGGTTTGGATTTTTGAAATGGGGTTCAACTGCTTTCCGTAACATGCTTGTTGTTCCACCTGGATCTGGAATTGTGCATCAGGTTAACCTTGAATATCTGGCCAGAGTTGTGTTTAACAATGGTGGGATCCTTTACCCTGATAGTGTTGTTGGAACAGACTCCCACACAACTATGATAGATGGTCTTGGTGTTGCTGGATGGGGAGTTGGTGGTATAGAGGCAGAAGCTGCAATGCTTGGCCAGCCAATGAGCATGGTATTGCCAGGAGTTGTGGGCTTCAAGTTAACAGGGAAGCTGAGGAACGGTGTTACTGCTACAGATTTGGTTCTAACAGTAACTCAAATGCTTAGGAAACATGGCGTTGTCGGAAAATTTGTTGAATTTTACGGGGGAGGCATGAGTGAATTATCACTGGCTGATAGGGCTACAATTGCAAACATGTCACCAGAATATGGTGCAACTATGGGTTTCTTCCCAGTTGATGGAAAGACATTGGACTACTTGAAGCTAACTGGCAGAAGTGATGACACTGTGGCCATGATAGAGTCTTACCTGCGTGCCAATAAGATGTTCGTCGACTACAACCAGCCTGAAGCTGAAAGAGTGTACTCATCTTATCTGGAACTTAACTTGGAGGAGGTAGAGCCATGCTTGTCTGGACCAAAACGGCCTCATGACCGAGTGACTTTGAAGAACATGAAATCAGATTGGCTGTCTTGCTTGGATAATGATGTAGGCTTCAAGGGTTTTGCTGTCCCCAAAGAATCACAGGGTAAAGTTGCTGAGTTCTCTTTCCATGGGACACCAGCAAAGCTAAAGCATGGTGATGTTGTAATTGCTGCTATAACCAGTTGCACCAACACATCAAATCCTAATGTAATGCTGGGAGCTGCTCTAGTTGCCAAAAAGGCTTGTGAATTAGGCCTTGAGGTCAAGCCATGGATTAAGACAAGTCTTGCACCTGGTTCTGGAGTTGTGAAGAAGTACTTGGACAAGAGTGGTCTGCAGAAATATCTAGACCAGCTTGGCTTCCATATTGTAGGCTATGGTTGCACAACCTGCATAGGAAATTCTGGAGAACTTGATGAAACAGTATCTGCTGCAATTTCTGACAACGATATTGTCGCTGCTGCCGTGTTATCTGGAAACAGAAATTTTGAAGGGCGTGTGCACGCATTAACCAGAGCAAATTATCTTGCCTCTCCTCCATTGGTTGTGGCCTATGCCCTTGCTGGCACGGTCAATATTGATTTTGAGAAAGAACCAATTGGCATCTCGAAAGATGGGAAGGAGGTTTACTTCAGGGACATCTGGCCTTCCACTGAAGAGATTGCTGAGGTTGTTAAATCAAGTGTGCTACCTGACATGTTTAAGAGCACATACGAGGCAATAACCAAAGGAAATCCTATGTGGAATGAGCTGTCTGTATCAGCAAGCACTCTCTACCCATGGGACCCGACATCTACTTACATCCATGAGCCTCCTTATTTCAAGGATATGACAATGTCCCCTCCTGGCCCACGGCCTGTGAAGGATGCTTACTGTCTCCTGAACTTTGGTGACAGTATCACAACTGATCACATCTCACCTGCCGGAAGTATTCACCCTGACAGCCCTGCTGCTAGATATCTGAAGGAGCGTGGTGTTGAAAGGAAGGACTTCAACTCATATGGCAGTCGGCGAGGAAATGATGAGATCATGGCTAGGGGAACTTTTGCCAACATTCGCCTTGTGAACAAGTTCTTGAAGGGTGAGGTTGGCCCAAAAACCATCCATATTCCATCAGGGGAGAAGCTCTCTGTTTTCGACGCTGCTACGAAATACAAGAATGAAGGACATGACACTATTATCCTGGCTGGTGCTGAGTACGGTAGTGGAAGCTCTCGGGATTGGGCTGCGAAGGGTCCAATGCTACAGGGAGTCAAGGCTGTGATTGCTAAGAGCTTTGAAAGGATTCACCGCAGCAACCTTGCTGGTATGGGTATCATTCCTCTATGCTTCAAGTCAGGGGAGGACGCCGACACCCTTGGATTGACTGGCCATGAGCGTTTCACGGTTCACCTACCGGCCAATGTAAGTGAGATCAAGCCTGGGCAAGATGTTACTGTGACGACTGATAATGGGAAGTCCTTCACTTGCACACTTCGATTTGACACTGAGGTGGAGCTTGCATACTACGACAATGGTGGCATTTTACCGTATGTCATCAGAAAGATCGCCGAGCAGTAG</cdnaseq>

Protein Sequence

<aaseq>MPPLTSALLSRSSSTRIPAAAAAAAVISNPAGAAASSSSPSPPPPSSRPRPASPFASGLAGRIFGGRRAAARSSSSAAAVFERRFASAAAKNSYDEILTGLAKPGGGAEFGKYYSLPALSDPRIERLPYSIRILLESAIRNCDEFQVTGKDVEKILDWENSAPKQVEIPFKPARVLLQDFTGVPAVVDLACMRDAMSKLGSDPNKINPLVPVDLVIDHSVQVDVARSENAVQANMELEFHRNKERFGFLKWGSTAFRNMLVVPPGSGIVHQVNLEYLARVVFNNGGILYPDSVVGTDSHTTMIDGLGVAGWGVGGIEAEAAMLGQPMSMVLPGVVGFKLTGKLRNGVTATDLVLTVTQMLRKHGVVGKFVEFYGGGMSELSLADRATIANMSPEYGATMGFFPVDGKTLDYLKLTGRSDDTVAMIESYLRANKMFVDYNQPEAERVYSSYLELNLEEVEPCLSGPKRPHDRVTLKNMKSDWLSCLDNDVGFKGFAVPKESQGKVAEFSFHGTPAKLKHGDVVIAAITSCTNTSNPNVMLGAALVAKKACELGLEVKPWIKTSLAPGSGVVKKYLDKSGLQKYLDQLGFHIVGYGCTTCIGNSGELDETVSAAISDNDIVAAAVLSGNRNFEGRVHALTRANYLASPPLVVAYALAGTVNIDFEKEPIGISKDGKEVYFRDIWPSTEEIAEVVKSSVLPDMFKSTYEAITKGNPMWNELSVSASTLYPWDPTSTYIHEPPYFKDMTMSPPGPRPVKDAYCLLNFGDSITTDHISPAGSIHPDSPAARYLKERGVERKDFNSYGSRRGNDEIMARGTFANIRLVNKFLKGEVGPKTIHIPSGEKLSVFDAATKYKNEGHDTIILAGAEYGSGSSRDWAAKGPMLQGVKAVIAKSFERIHRSNLAGMGIIPLCFKSGEDADTLGLTGHERFTVHLPANVSEIKPGQDVTVTTDNGKSFTCTLRFDTEVELAYYDNGGILPYVIRKIAEQ</aaseq>

Gene Sequence

<dnaseqindica>1..265#372..479#865..1025#1553..1645#1974..2159#2256..2417#2786..2930#3005..3147#3224..3280#3362..3441#3520..3595#3901..4086#4359..4426#4504..4622#4700..4821#5014..5112#5225..5704#5812..5910#5992..6234#6328..6396#ATGCCTCCCCTCACGAGCGCCCTCCTCTCCCGCTCCTCCTCTACCCGCATCCCCGCCGCGGCGGCGGCGGCGGCGGTGATCTCGAATCCCGCGGGCGCCGCCGCGTCGTCGTCGTCGCCGTCACCGCCGCCTCCGAGCTCTCGCCCCAGGCCGGCGTCCCCCTTCGCGTCCGGCCTCGCTGGCCGCATCTTCGGCGGCCGCCGCGCCGCCGCGCGCTCCTCGTCGTCCGCCGCGGCCGTCTTCGAGCGGCGCTTCGCCTCGGCGGGTAAGGGGGGGCTAACGACCTGGTGGGTGGGGGATGGGATGGGGGCTGGCTGTATGTGATTATCTCTCTGATGGTTTATCTGCTTTTTTCTGTTTGTTTTGGGCAGCGGCGAAGAACTCGTACGATGAAATCCTGACGGGCCTCGCGAAGCCGGGAGGCGGAGCGGAGTTCGGGAAATACTACAGCCTGCCCGCGCTATCCGATCCGCGGATCGGTGAGTGTTTTGATGCCTTCCAGTATTGTTGGACGCCCCGATCCACTATTTGGTGTTGGATGTGTGTTTTTTTTGTTTGATTGTTAGTTCGTGATGGTTGAATTGGGCATTCAACGAGGGGTTGACGCTTTCATCTCTTTCGGTCGGTCAATCGTTTGTGAAGATTTGAATTGGACGAATTGTTTGGTTTTGTTCGAGGGCTCTGACCTCCGGTTAGAGCGTAATGTGGTTGTGAAATTGGAGGTTTAGATGTGTTCAGACCAAGGAATTTTGATGCATTTGTGCTTTCCTTATATAGAATTTCCTTTGAAGGTTTTGATCTACCTCTGCTGCCGAATTATTAGAACAACGATGATTTGATCCATGTTTTGGTGGTTTTGATCAGAGCGACTCCCTTACTCGATAAGGATTCTTCTCGAGTCGGCAATCAGAAACTGTGATGAGTTCCAGGTCACCGGGAAGGACGTTGAGAAAATCCTGGACTGGGAGAACAGCGCACCAAAGCAAGTCGAAATCCCATTTAAGCCAGCCCGTGTCCTCCTCCAGGTACTAATCCTGGCACCGTCTCATGCTTTTTGATCTACTTTGTTCGATTGCTGTTGATAGAATAATTGTGAGCTGGAAAAGTTTCAGTCAATAGCCTTTGATGACAGGAATATTGGAACTGTAGTTCCCACTTTCTTACGAACCTATCCTTTCAAGGAAGTGGAGTTGCACATGGCTTATCTTTTGTTCGTTTTTCTGATCTATGATTGCTACTGTATGTAATGTTGTTTAATGATAGATATGGAAACAACAAGGCAGAAGGTGCTGGTGGCTGTACAAAATTACCTGCATCTCCATATTATATTCTTATTCTCTAGACAACAATGAAAGTCAATCATTCTATTTTAGTCTGGCATGTGGCTAGTGATAGCTGGATATATTGCTTATTATTTATATCTGATGTCACATTTTCTGATGATGTGTCGATGCAAATGTGTTCTGCTTTCTCAGTTGTTGTAACTGAGTTGTTGAAGCTACCTTGATGATGACTCAGCCAGCTAACCTTTTACCTGATTTACACATTACAGGATTTCACTGGTGTTCCAGCAGTGGTTGATCTTGCGTGCATGAGGGATGCTATGAGCAAACTTGGCAGTGACCCAAACAAAATTAATCCTCTGGTGAGTCCATAGTCAAATGCATACAATTACAAAATTACTACCCTCTCATTGTGCAACTTATCCATCACCCATCGGTATGTTACCCTTGATACGTGATTTACAATAACCAAGCTTGTTTCATTTATTGTTAGTTGATACCCTACTTTGGACCTTTCCTGCTCTATTAAGCTGTGTATTTAAGCACGGTTCTGATCATCTCCTTACATGTAGCTATCTGTATATACGGATTACATTGGGCTACATGCATATGTGGTATAAATTGGAAAATGGTGCTTGTGCTTTTGCTGACATTACTGGATGTGCCTTTCTCCATTTATTTCGTTTGCAGGTACCTGTAGATCTTGTTATTGATCATTCAGTACAAGTTGATGTGGCAAGATCAGAAAATGCTGTTCAGGCAAATATGGAGCTAGAGTTCCATCGTAACAAGGAGAGGTTTGGATTTTTGAAATGGGGTTCAACTGCTTTCCGTAACATGCTTGTTGTTCCACCTGGATCTGGAATTGTGCATCAGGTATATCAAGAAACAATCATTCTGATATTTTTCTCAAATATTTCACCTTTGTTATATAACCACAGTAAACACTAACCACATGTTTTTTTTTGTTAGGTTAACCTTGAATATCTGGCCAGAGTTGTGTTTAACAATGGTGGGATCCTTTACCCTGATAGTGTTGTTGGAACAGACTCCCACACAACTATGATAGATGGTCTTGGTGTTGCTGGATGGGGAGTTGGTGGTATAGAGGCAGAAGCTGCAATGCTTGGCCAGGTGAAAAAAAATTCTATGGCTAATAAATTTTCATCTCTGATACTATGGTTGCAATGAATTACAGAGTTTGTATCAGGATGTTATTTTTCTCTTTAGCATAACAAAAGAAAAGGGTGGTTGGGTTTATTCGACTTCTACCTCTTTATCACACAACACACATTCAGCTTGCCACACGTTTTGTGTTTGGTCATGGCTCACCAAATTCTTATTCTTTGATTGTAAATTTTAACGTATGCCTGCATCAACATGTCATGCACCAAAACCCCAACAGTATGTAAATAAGCTTGAACCTTGGGGGGTGGCTGCTTCTGTCCATTTGATTGCCCACTTATGCCTATTTTCTGTTCTAAATGCGCTACTTTCTGCAGCCAATGAGCATGGTATTGCCAGGAGTTGTGGGCTTCAAGTTAACAGGGAAGCTGAGGAACGGTGTTACTGCTACAGATTTGGTTCTAACAGTAACTCAAATGCTTAGGAAACATGGCGTTGTCGGAAAATTTGTTGAATTTTACGGTATTCGCCTTGCATATCTTTAATACATGTCTCTTTCTTTTGATAGCAAGTCTAATGCTAGTTCTCAATTCCAGGGGGAGGCATGAGTGAATTATCACTGGCTGATAGGGCTACAATTGCAAACATGTCACCAGAATATGGTGCAACTATGGGTTTCTTCCCAGTTGATGGAAAGACATTGGACTACTTGAAGCTAACTGGCAGAAGTGATGACACTGTAAGTTATAGGCAGTTATCTTATTGGATTTGATCCTAAGTGTACTTGTATAGTTCTAATATATTTGTGAATTTAGGTGGCCATGATAGAGTCTTACCTGCGTGCCAATAAGATGTTCGTCGACTACAACCAGGTGATTTTCATATTATATCTGAAGAGCATATTATTTGGCAAATACTTTTTTACTTTATTGATGCCCTTTTTCTTAATGTAGCCTGAAGCTGAAAGAGTGTACTCATCTTATCTGGAACTTAACTTGGAGGAGGTAGAGCCATGCTTGTCTGGACCAAAACGGTAATGTACTTGATTAATTCATAATCTTGGCACATGTTTAGCCACATTCAGTTATAAACTGAAGGACCCACTGCACAGGCCTCATGACCGAGTGACTTTGAAGAACATGAAATCAGATTGGCTGTCTTGCTTGGATAATGATGTAGGCTTCAAGGTAAAGATCTACTGTACAGATAACTACATAACTCTTCAACTGGTGTTGTTGTGATGTTCTGACTTTTGTTGTTTATTTGCTGATATTAAATGGCATTCCAAATCCTCATTTAAGTTGCTTAATCTTGGATCACATTTGGGATATATTCATACATTATGATAAACAAATTATTTTTTAGTGAAAGATGAACAAAATGGGGCCCCATATTTCTATGTTCTGATATTGCACAGAATACATCTCTGGTTTATACATTGTCCTGTTATCTTTTCCATTTTCATCCTATCCTCACTACGATCATTTTGCAGGGTTTTGCTGTCCCCAAAGAATCACAGGGTAAAGTTGCTGAGTTCTCTTTCCATGGGACACCAGCAAAGCTAAAGCATGGTGATGTTGTAATTGCTGCTATAACCAGTTGCACCAACACATCAAATCCTAATGTAATGCTGGGAGCTGCTCTAGTTGCCAAAAAGGCTTGTGAATTAGGCCTTGAGGTGAAGCCCTTTACCTTGTTTCCAGCTTGACATCCTTGTTTAATTTATCTCAAGTATGCATATGTGTTTTAAATAAACAAAAAAAATCATCTCTATCAGTTCATTTATGCTCGATATATTGTATTCCTATTGAGATGGATCAATCATTGTCCCTTATCATCCTATTCCATTTTCCTGTTATTGTCAATGAAATGTAATTGCAGTGAGTTATTTTGTTCTTCCTGAGTTCTGAAAAATGCAAGTACTACTTTAATATTTATTTTTATCATCAGGTCAAGCCATGGATTAAGACAAGTCTTGCACCTGGTTCTGGAGTTGTGAAGAAGTACTTGGACAAGAGGTAGGTGATTGTTCCTTGAATTCAAAGTTTCTTGTTTTTGTCAGCCTTAGTTATTCTCACTTTGTATTTCCTTGCAGTGGTCTGCAGAAATATCTAGACCAGCTTGGCTTCCATATTGTAGGCTATGGTTGCACAACCTGCATAGGAAATTCTGGAGAACTTGATGAAACAGTATCTGCTGCAATTTCTGACAACGGTGAGTTTGACATCATTAGCTAAGAAAGTGTGTAAAGTTGAGAAGCTCGCTACTTACTTTTCTCTCTTACTTTTTAGATATTGTCGCTGCTGCCGTGTTATCTGGAAACAGAAATTTTGAAGGGCGTGTGCACGCATTAACCAGAGCAAATTATCTTGCCTCTCCTCCATTGGTTGTGGCCTATGCCCTTGCTGGCACGGTAAGATAACAGATTTTGTTTGACATATGCCTGTAATTTCAAACTAAACAGTTAAATTACTGTACTATTATAGCAATATACTCAAGAATCAAATCAAAGATGTGATTGGTAATATGTAAGCTAGCTTTTTATACATCAATGACTGCATGTCAAAAGTTCTGCCCATTTTCTAAACTGCCAGATATGCCACAGGTCAATATTGATTTTGAGAAAGAACCAATTGGCATCTCGAAAGATGGGAAGGAGGTTTACTTCAGGGACATCTGGCCTTCCACTGAAGAGATTGCTGAGGTTAGCACTGCAGTTTTGTCCGCTTCCCTTTTTTCATATAAATCTATACTTGCCTATTGAAAACATAGTGGATTCCATAAGTGCTTCATGCTGGTGCTTTTAATTTTGGTAGGTTGTTAAATCAAGTGTGCTACCTGACATGTTTAAGAGCACATACGAGGCAATAACCAAAGGAAATCCTATGTGGAATGAGCTGTCTGTATCAGCAAGCACTCTCTACCCATGGGACCCGACATCTACTTACATCCATGAGCCTCCTTATTTCAAGGATATGACAATGTCCCCTCCTGGCCCACGGCCTGTGAAGGATGCTTACTGTCTCCTGAACTTTGGTGACAGTATCACAACTGATCACATCTCACCTGCCGGAAGTATTCACCCTGACAGCCCTGCTGCTAGATATCTGAAGGAGCGTGGTGTTGAAAGGAAGGACTTCAACTCATATGGCAGTCGGCGAGGAAATGATGAGATCATGGCTAGGGGAACTTTTGCCAACATTCGCCTTGTGAACAAGTTCTTGAAGGGTGAGGTTGGCCCAAAAACCATCCATATTCCATCAGGGGAGAAGCTCTCTGTTTTCGACGCTGCTACGGTAATATACTTGCACTTAAAATCCAAATTTACATTTCATTTATGCATATATATATTGTACTAATGCATTCTGAAATTTACTTATCCATTTTTATGTTCTTACCACAGAAATACAAGAATGAAGGACATGACACTATTATCCTGGCTGGTGCTGAGTACGGTAGTGGAAGCTCTCGGGATTGGGCTGCGAAGGGTCCAATGCTACAGGTAACTTCGATTCCATCACAATTTCTTCAGCAAAGGTCATTAATTTCTTACTAATGGGTGTACTTCGATTTGGTGATACAGGGAGTCAAGGCTGTGATTGCTAAGAGCTTTGAAAGGATTCACCGCAGCAACCTTGCTGGTATGGGTATCATTCCTCTATGCTTCAAGTCAGGGGAGGACGCCGACACCCTTGGATTGACTGGCCATGAGCGTTTCACGGTTCACCTACCGGCCAATGTAAGTGAGATCAAGCCTGGGCAAGATGTTACTGTGACGACTGATAATGGGAAGTCCTTCACTTGCACACTTCGATTTGACACTGAGGTATGATCATTCGTCATCAATGATTTCATTCGAGTGTTGGGTGCTGATTGTGTATGTTGCCGATGTTGATGAATTTGTTAATTATTTGTCCAGGTGGAGCTTGCATACTACGACAATGGTGGCATTTTACCGTATGTCATCAGAAAGATCGCCGAGCAGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA011492