BGIOSGA011518

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Revision as of 09:32, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA011518| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA011518, complete gene.| tag = OS03G01...")
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Gene Name

BGIOSGA011518

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA011518, complete gene.

LocusTag

OS03G0131400

Ensembl Transcript ID

BGIOSGA011518-TA

Ensembl Protein ID

BGIOSGA011518-PA

Length

5082

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:2029587..2034668

Sequence Coding Region

2034579..2034668,2034384..2034468),complement(2033958..2034068,2033325..2033422),complement(2033143..2033229
,2032911..2033047),complement(2032726..2032798,2032587..2032632),complement(2032406..2032515
,2031815..2031922),complement(2031647..2031706,2031233..2031294),complement(2030176..2030488
,2029587..2029883

Genome Context

<gbrowseImage1> name=IndicaChromosome03:2029587..2034668 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:2029587..2034668 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGACGACGCCACGGCGGCGCGCTGACCCATCGCCCCCGCCTGCTCGCCGCCTCCTCCACCGCCTCGGCTCCGCGGCCTCCGGTCTGCAGACGCTGGCGTACAGCTCGAAGAAGGAAGGCGGCGGCGGCGACATGGGCCCACGCAACGGCGGTTCCTCTTCTAATAGAAGACCAGGATTTGTTGATTCTTCTTCATGGAGATATTTTGACTCGAGGGTTGTTGGTATTACTAGAGGGGATATACCTCGCCATGCCTGGACTGTCCTACACAGGCTAAAACGAAAAGGGTTTGCAGCTTATCTTGTTGGGGGATGCGTGAGAGATTTGCTACTGAAAAGGGCACCTAAAGATTTTGATGTGATTACTACCGCAAGCCTCCAGCAGATTAAGAAAATGGTTTTCCAACGATGTATAATTATTGGCAAACGCTTTCCAATATGCCAGGTTAATATGTATGGCACAAAAATTGAGGTTTCTAGCTTTAGCACGAATGCAAATCATGTGAAAGGAAGTAAAAATATAGGATGTTCAGAGGAGTTTAAACGTTATGATGAGGGGGATATTCTTCTCTGGCAGAATTCTATGAAAAGAGACTTTACAATAAACAGCTTATTCTTTAATCCATTTAACTTTAAGATTTATGATTATGTGAATGGAGTAAGGGATATTAGCAAAAACAAGGTGTCTACAGTGATTCCTGCCCGTGTTTCATTCAAGGAAGACCCTGCCAGGATTTTGCGTGGCTTGAGAATTGCTGCTCGCCTTGGTTTTGAGTTCTCCAGTGAAACTTCTGCTGCAATACGGGAACTTTCTTTGTCCATAACAGATATTGACAAGGCAAGATTAATGATGGAATTGAATTATTTATTGTCTTATGGGGCAGCAGCTTCTTCTCTTAGGTTACTTAGAAAATATGGACTTCTTGATTTTTTGCTGCCTTTCCAGGCAGCATATATGTCGGATCAGATGAAGGATAAATCAAATGACACAGATTTAATGCTCATGAAACTACTGGCTAATCTTGATAAATTACTCTCTGCTGATCGGCCATGCCCCTCCTGTTTGTGGTTAGCACTGTTGACATTTCACAGTGCATTGGTAAATTCTCCACATGATGCCCAGGTAATCAGGGCTTTTGCTGCACTAATGTATTTTGGATCATGGGAGGGCGCAGTCAACTTCTTGAATCAAGACATTGGAGCACCAGCCCCATTTATTCCAGAAACACTAGGGCCTTCTCGGAGCAAACTGGAGAATCTCATGGAACAAACATCACATTTAGCATCACTAGTCAAGTCGTCAGTTGATACGTTGACATCTATAGATGCTCTCCAACAATCACTGGCCAAATACTCAAAGGCTTCACAAGTTTCAGGACTGGTGCTTGTATCTAGCAGAGAGAGGGAGAGAGTGTTGAGAATATTTGAGGGCCTTGATACTGACTTAACTTCATATGAAGGGACAAGAGGGATGCAGGAAATTGATTATAAGTTACTGAAGGATGGGCACCCTGGTGAGGTCCGGTTTGTTCTTGGGCAAGTAATCATGGACACTATGAGCGAGGAGTTACCACGTGTATCCACTGAGTATGATCAGCTCAATATGGAGGCTAGTGAAGATGATCTTGCTGACGGAAGCCGTCCTTCACTGTCCACATTATTTTCCAGTAAATCGTGA</cdnaseq>

Protein Sequence

<aaseq>MTTPRRRADPSPPPARRLLHRLGSAASGLQTLAYSSKKEGGGGDMGPRNGGSSSNRRPGFVDSSSWRYFDSRVVGITRGDIPRHAWTVLHRLKRKGFAAYLVGGCVRDLLLKRAPKDFDVITTASLQQIKKMVFQRCIIIGKRFPICQVNMYGTKIEVSSFSTNANHVKGSKNIGCSEEFKRYDEGDILLWQNSMKRDFTINSLFFNPFNFKIYDYVNGVRDISKNKVSTVIPARVSFKEDPARILRGLRIAARLGFEFSSETSAAIRELSLSITDIDKARLMMELNYLLSYGAAASSLRLLRKYGLLDFLLPFQAAYMSDQMKDKSNDTDLMLMKLLANLDKLLSADRPCPSCLWLALLTFHSALVNSPHDAQVIRAFAALMYFGSWEGAVNFLNQDIGAPAPFIPETLGPSRSKLENLMEQTSHLASLVKSSVDTLTSIDALQQSLAKYSKASQVSGLVLVSSRERERVLRIFEGLDTDLTSYEGTRGMQEIDYKLLKDGHPGEVRFVLGQVIMDTMSEELPRVSTEYDQLNMEASEDDLADGSRPSLSTLFSSKS</aaseq>

Gene Sequence

<dnaseqindica>1..90#201..285#601..711#1247..1344#1440..1526#1622..1758#1871..1943#2037..2082#2154..2263#2747..2854#2963..3022#3375..3436#4181..4493#4786..5082#ATGACGACGCCACGGCGGCGCGCTGACCCATCGCCCCCGCCTGCTCGCCGCCTCCTCCACCGCCTCGGCTCCGCGGCCTCCGGTCTGCAGGTTAGTCTCTCGCGGTCCTGCCACCGGGGCATTTCGTCGAGCGCCTTGCGGGCGACGCGCTTGGGCTGGAATCCCTCTCGTCTTACTGTGCTTCGTTCTGTTGCTTCCAGACGCTGGCGTACAGCTCGAAGAAGGAAGGCGGCGGCGGCGACATGGGCCCACGCAACGGCGGTTCCTCTTCTAATAGAAGACCAGGTGATGTTTTGATCACTCGTGATGGCCCCCGGAGAGCAGATGGTTGATGCTCACACGTGTAGATCAGTAAATCACATCTGTGCAATTCGCCCTTTCAGCAAATGAGCAAATGCTATTGATTGTGCTGCACGGTAGCTTGTTTACGTTTAGCTGGAAATGGCGTACTTTCTTTGTTGGTACACGGGAACTGCATAGTTGTTTACTTGTTTAGTATTTTGATCAAATCTCTGCTTTTAGTGGAATAATGCAGGCAGACCTTAGCTAACTACTGGTTACACAGCGGGAAACCTAAAAATAGGATTTGTGTTTGTGCAGGATTTGTTGATTCTTCTTCATGGAGATATTTTGACTCGAGGGTTGTTGGTATTACTAGAGGGGATATACCTCGCCATGCCTGGACTGTCCTACACAGGCTAAAACGAAAAGGTGGGTAATAAATCTCTTGAACACTTATTTATATTTCTGAGTTTTTGTGCATTGATATTCCATACTCATGCCACCGTTTGCTCCTGTACGGTAAAACATGTATTACTACGAATGAAATTATGCAATATATTAGTGGTTGTTTCCTTTTTGTTGCATTACACCAAGTGAGCTATTGTAATATTATCCAAAGGCAAAAAAAAGAAGGTAATCTTATTACACTTGTCCCGGCAATGCATGAACTTCTATCTTAATGTGCCATAGTGCAGATGCCATGCCCATCCATTAAAGCATCCCCACTAATCGGAAACATGTTTGAGGTGAAGGCAAGCAATAGTTCAAAATTGTAACGTGAGATGGTTTTGGAACTCAATTTCTCAGCTTCCTTCATGTTAACTATGGATCCTTTGGGAAGCATGAATATGTTGCTTGAACTTGTCGGAAGAGTACACTTATGGAACATTTTGTGGTGTTCTCACTTTTAAATATGTATAGGGATGTGTTTATGTATGCTTACTCTATTAAAGTTGTACTGCAGGGTTTGCAGCTTATCTTGTTGGGGGATGCGTGAGAGATTTGCTACTGAAAAGGGCACCTAAAGATTTTGATGTGATTACTACCGCAAGCCTCCAGCAGGTTTTGGTGCATTAATTTGTCATAAGTGTTCATTTTCTGGATAAAAGCAAAAGAAAAAAAAAAGCTAAGTTGACAGACGTTGCTTTTTTTTTCAGATTAAGAAAATGGTTTTCCAACGATGTATAATTATTGGCAAACGCTTTCCAATATGCCAGGTTAATATGTATGGCACAAAAATTGAGGTGTGTTATTCATAGGAAAATCCACATTATGAACAATTGTCTTTGCAGCAACTTTGCCAAATGCTTATTTCTTGGGATTTCTTTTGTTCTAACAGGTTTCTAGCTTTAGCACGAATGCAAATCATGTGAAAGGAAGTAAAAATATAGGATGTTCAGAGGAGTTTAAACGTTATGATGAGGGGGATATTCTTCTCTGGCAGAATTCTATGAAAAGAGACTTTACAATAAACAGGTAATCTTCTGAATAAAATCTTGTGCCTGAAATGTTTAACAGATGTTGTTGACTTCTTTTTGAAACATTGCTGGAGGTAATTACTAACATTGTTGTAATCCTTTCATGGCAGCTTATTCTTTAATCCATTTAACTTTAAGATTTATGATTATGTGAATGGAGTAAGGGATATTAGCAAAAACAAGGTAACAATTAGCTTGGTTCATCTCAATCCATGCAGATATCCAGAAATATCCTTGTTTTTTCCCCCTTTGGCTAACTCCTTGAGTGGATAACAGGTGTCTACAGTGATTCCTGCCCGTGTTTCATTCAAGGAAGACCCTGGTAGGTATTCAAAGAATATTCCTCATTTCTTTAATCTATCCACAGAAAATTTAGATTCTGGTTTATTTCAGCCAGGATTTTGCGTGGCTTGAGAATTGCTGCTCGCCTTGGTTTTGAGTTCTCCAGTGAAACTTCTGCTGCAATACGGGAACTTTCTTTGTCCATAACAGATATTGACAAGGTTTGTTGTATCCCACCATGGAACTATATGTATTTATTGCATAATTGCCACTAGGGCTTGCACTATCTGTCAACCTGCCATCACTTTTTCTGTAATTGCTCAAATGTCACTACTTTTCTTTCAGAGTTGTCAAAATGCCAGTACACTGTTAAGTCAATGGTTTTTGACTGTCTCTATGACCGAAATGGCTTCTTGATAGCATATTAAAAAAACAAGTTATTTCTCTTCCTTTATGCACAATCATAGGTGACTTGCAATCACCTATGAAAAATGAAAGCTAGAGAGGAGAAAGAAAATAGAGATGAAGGGAATTTGGACAATTTTTAGCCTCTAACTAGCATTTTTGCGTCACACTTGAATCCAATGAGATAAGAGCAATTGGGCAAAAACCCTGTGGCATTTTGACAATTAGAGCATGCACTGATGGCAAAATGTACCATTGTTTCTTTTTTTTCTAATGCTTTTGACCTCATTACTGTGTAGGCAAGATTAATGATGGAATTGAATTATTTATTGTCTTATGGGGCAGCAGCTTCTTCTCTTAGGTTACTTAGAAAATATGGACTTCTTGATTTTTTGCTGCCTTTCCAGGTAGGTTGAGCAACGCGATCATGTCATTGCGTAAGTAGAGTCATGCTTGTGGTACTGACCACTTCCATCTTTATCTTACTTGCATATGTAATGATATTTTCATTTTAGGCAGCATATATGTCGGATCAGATGAAGGATAAATCAAATGACACAGATTTAATGCTCATGGTGAGTAACTCTGGAAATGTGTCATACTATATGATTTTTTTTTTGCTTCATAATAAAAGGTGAAATAATTTAAACCACGCACATGTGTTGGCTAGTGTTAGCTAACTAGTGTTGTTACGCATCAATATCCATGAACATGAAGTATTGGCTGCATAGTTCTATAGTTTTGTTACTGTTCATCAGCTCTTGACAGTCACTTCTTGTTAGTTGCCTTAATGTAACTATGTAAGTAGTGTCTTCCTGGTTTCCTTTTCTTTAGTCAGTGACTTAGAAGTGTAATATTTAAGTTTTAAGACTAGGGCTCGTTATGTGTTTATATATGCTGTATAATGATGTGCATTCACATGTGCAGAAACTACTGGCTAATCTTGATAAATTACTCTCTGCTGATCGGCCATGCCCCTCCTGTTTGTGGTAAGAAACTTTAAATGAATGCCTGTGCGCATTTACCTTCATTATATAAAGGGGTGTGAAAATCATTTAGTCTTTGTTCGGTTAATCCCTGTGAAGGAGGGATCGGAGGGGATTTATTCCACACCTATTGTGGTGTGGAATTATTCCCCCTCAATCTCCTCCAATACTCTTCAATCCCCTCTAAACCGAACGAGGCCTTAGTGTTCTTTTTTGTATTGGCTGGTCCTACATATACACTTTGCAGGAGATGCATAGTACTAGACTACAATCATCAAAATTCAAAAACCAGAAGTGTAGCTGATTAAAGATTTGCACTGACCAGAGTGATAGAGATGTATAGTGAAGTTAATATTCCTTTTTGCAGTCTTAGGGACACACTGATGTGCACTGTGAGTCTAGCGGTTCTGACTTTCCAGTTTTCATCACTAGAAGATATGCATAGATTTCTGTGAAATTTTGAGTGTCCAGTAGTATACTGGATAACTTGTGTGAGTCCTAGCCCGAAGGACAAAGTGGATTATCTTATTATCTATGTATGCCACCCTGGAATTTCTCACACACTTGCGCACGCACCTATGCACACTGACACACACATTGCATTTTTTTTAGAGTGTTACCTTTTTTTTCTACACTAGTATTATATACCACTGTCAATTTGTAGTTGAATGTTCCCATTTTGTGTCTAATACAATTCTTGTATATTTTGAGCAAGTCACGTCTATGGCATTTCATGTTATTCCACAGGTTAGCACTGTTGACATTTCACAGTGCATTGGTAAATTCTCCACATGATGCCCAGGTAATCAGGGCTTTTGCTGCACTAATGTATTTTGGATCATGGGAGGGCGCAGTCAACTTCTTGAATCAAGACATTGGAGCACCAGCCCCATTTATTCCAGAAACACTAGGGCCTTCTCGGAGCAAACTGGAGAATCTCATGGAACAAACATCACATTTAGCATCACTAGTCAAGTCGTCAGTTGATACGTTGACATCTATAGATGCTCTCCAACAATCACTGGCCAAATACTCAAAGGCTTCACAAGTTTCAGGACTGGTAAGTATTTCTTTAGCATACGTCTCAACTCCCAATTGTCATATTAATTCCTGGTATGAAATCCATAGTTGAATCATTGAATGTTGCTTGGGCTCTTCTGCAAGTAAGCATGCAAATATTGACTGATCAATCATTGTTCAGAGCCACCTAATGGAGTTCTAATATTGTGTAGTAGGAACTGTTCTAACGATGCATGAACCAGTGTTTAATTGGCCCCATATTTGTTCCTAAATGAATTTTTACATTATACATACAAAGCGTACTAAAATTTTGTTACTGGGTTTGTTATCAGGTGCTTGTATCTAGCAGAGAGAGGGAGAGAGTGTTGAGAATATTTGAGGGCCTTGATACTGACTTAACTTCATATGAAGGGACAAGAGGGATGCAGGAAATTGATTATAAGTTACTGAAGGATGGGCACCCTGGTGAGGTCCGGTTTGTTCTTGGGCAAGTAATCATGGACACTATGAGCGAGGAGTTACCACGTGTATCCACTGAGTATGATCAGCTCAATATGGAGGCTAGTGAAGATGATCTTGCTGACGGAAGCCGTCCTTCACTGTCCACATTATTTTCCAGTAAATCGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA011518