Os12g0299600

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Gene Name

Os12g0299600

Description

Transposase, IS4 domain containing protein

Version

NM_001189983.1 GI:297729096 GeneID:9269494

Length

3369 bp

Definition

Oryza sativa Japonica Group Os12g0299600, complete gene.

Source

Oryza sativa Japonica Group 

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:11909078..11912446

Sequence Coding Region

11909078..11909083,11909322..11909893,11910341..11910416,11910509..11910819,11910910..11911029
,11911172..11911859,11911955..11912446

Expression

GEO Profiles:Os12g0299600

Genome Context

<gbrowseImage1> name=NC_008405:11909078..11912446 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:11909078..11912446 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggatgaaattaaaaggaggagagaagaggacgatgatatgatgctttttatttttcctgcgatgtatatgctgtgcggtacgacaaatagtgagaaaatacctagacatatctcaagactatccggtaaagagcggcttcaagaaatccttgaaggacatgtaatggattgtaaagttgcattccgcatggagcctcatgttttcaagacaatagcgaattatcttagagaggaaaagttgttaaaggatagtagaggcttgaggattgaggagaaacttgggatatttatgttcatgctcgctcacaatgcaagctttcaagatctacagtatgaattcaagcatagtgggtctacacttcatcggcatattaagtctattttcaagataatcccagctctcacctatagatttctcaagcttcctcatgccaaccaaacgcattggaagattagaacaaatcctcgcttctttccttacttcaagaattgcataggggctattgatggcactcacattcctataactatagatggagagaaggcagctccttataggaacagaaaagggactttgagccaaaatgtgatggttgcttgtgatttcgacctaaatttcacttttatctcatgtggttgggaggggtctgcaaccgatgctagggtccttagatcagcaatgaatagtggctttcaagtcccaaatggtaaattttttctagtagatggtggttatgccaacacaccacagttcattgctccttatcgtggtgttcggtaccatctaaaggagtttggacgtggtcatcgtcgacctagagactacaaggagttattcaatcatcgccatgccattctgagaaaccatgtagagagagctctaggggttctaaagaagcgatttcccatcctgaaagtaggcactttccatcggataaagaaccaagtgcggattccagcagctgctgcagtgttccacaacatgatccggttgcttaatggtgatgagggctggttggacaaccaacctgataatatagaacctactaattttgtcgatctaccagaaggtgacagtgaataccaaaatgatgtgccatctcttagcaatcaaatgatcagtgggaataatattagagatatgattgctaagaagatgtgggaagattatgttcttatgatgtttggaagactatctccgaaagcaagcctattgcagcagcaacaaaggcatccacaaaagaaggcatcaccaaagagctgtagcatacagaagaagaaggcttctccaaaagctcaacaatcaagagcttcatggaacccgggactagaaaaggctttagttgatttacttcatgagcacaataacccacattaccggtgccaaaacgggtggacaagtgaagcatggaacaaggtcgtcaaagaatttcgtgacagacatccctatgtcgccatgaataagcaacagatccaagataaggagaaggagttaaaacgagattataggttgcttaaggaggcaaggaaacagagtggagcttcttgggataatcaacggtgcatgattgttgccgatgatgctgtttgggcaaacataattacgtcaaatgagaaagtaaggaagttcagcaaaaacaaatcctttcctctctttgaatccttgggtgaactttatgatggccaaactgctgagggcaacatgaatttcacttctattgagccattccaacatgctactctcacacaagtgaatgaatatcttgagagaagtgactcttttcctgatgtaaattgggttgctgatgatgatgagaccactgaagttcaagatgaagataatgcagtggagcatgaaaatcagggaagccacattactatcacctcaagagctaatggagaaaagaatgtcaagaagaccaaatctactgagagagagagagtagaaaagacaccgaagaggaataagaggaatgatgttgttgatatgatgggaagttacttggagatgagaaaaagacaatctgaggaggaggaagcaaagaagagggaggaggaagcaaagaagagggaggaggcaagcaaggttgatgattgctcaataaggaactgcatcactgttgtggaatcgatggaggagctctcaaatgaagaaaaggtcaaatcttttggagtattcaaggacgcgcagaatagggagatcttcatgagtgcagggcctatgactcgtcttatatggttaagaacgatgctggtttag</cdnaseq>

Protein Sequence

<aaseq>MADEIKRRREEDDDMMLFIFPAMYMLCGTTNSEKIPRHISRLSG KERLQEILEGHVMDCKVAFRMEPHVFKTIANYLREEKLLKDSRGLRIEEKLGIFMFML AHNASFQDLQYEFKHSGSTLHRHIKSIFKIIPALTYRFLKLPHANQTHWKIRTNPRFF PYFKNCIGAIDGTHIPITIDGEKAAPYRNRKGTLSQNVMVACDFDLNFTFISCGWEGS ATDARVLRSAMNSGFQVPNGKFFLVDGGYANTPQFIAPYRGVRYHLKEFGRGHRRPRD YKELFNHRHAILRNHVERALGVLKKRFPILKVGTFHRIKNQVRIPAAAAVFHNMIRLL NGDEGWLDNQPDNIEPTNFVDLPEGDSEYQNDVPSLSNQMISGNNIRDMIAKKMWEDY VLMMFGRLSPKASLLQQQQRHPQKKASPKSCSIQKKKASPKAQQSRASWNPGLEKALV DLLHEHNNPHYRCQNGWTSEAWNKVVKEFRDRHPYVAMNKQQIQDKEKELKRDYRLLK EARKQSGASWDNQRCMIVADDAVWANIITSNEKVRKFSKNKSFPLFESLGELYDGQTA EGNMNFTSIEPFQHATLTQVNEYLERSDSFPDVNWVADDDETTEVQDEDNAVEHENQG SHITITSRANGEKNVKKTKSTERERVEKTPKRNKRNDVVDMMGSYLEMRKRQSEEEEA KKREEEAKKREEASKVDDCSIRNCITVVESMEELSNEEKVKSFGVFKDAQNREIFMSA GPMTRLIWLRTMLV</aaseq>

Gene Sequence

<dnaseqindica>3364..3369#2554..3125#2031..2106#1628..1938#1418..1537#588..1275#1..492#atggcggatgaaattaaaaggaggagagaagaggacgatgatatgatgctttttatttttcctgcgatgtatatgctgtgcggtacgacaaatagtgagaaaatacctagacatatctcaagactatccggtaaagagcggcttcaagaaatccttgaaggacatgtaatggattgtaaagttgcattccgcatggagcctcatgttttcaagacaatagcgaattatcttagagaggaaaagttgttaaaggatagtagaggcttgaggattgaggagaaacttgggatatttatgttcatgctcgctcacaatgcaagctttcaagatctacagtatgaattcaagcatagtgggtctacacttcatcggcatattaagtctattttcaagataatcccagctctcacctatagatttctcaagcttcctcatgccaaccaaacgcattggaagattagaacaaatcctcgcttctttccttacttcaaggtgaatctggcactcaaaatagaaatgaatatctattccttctccaattaaataactcatgcatattctgtccttttcttccctttttgctgcagaattgcataggggctattgatggcactcacattcctataactatagatggagagaaggcagctccttataggaacagaaaagggactttgagccaaaatgtgatggttgcttgtgatttcgacctaaatttcacttttatctcatgtggttgggaggggtctgcaaccgatgctagggtccttagatcagcaatgaatagtggctttcaagtcccaaatggtaaattttttctagtagatggtggttatgccaacacaccacagttcattgctccttatcgtggtgttcggtaccatctaaaggagtttggacgtggtcatcgtcgacctagagactacaaggagttattcaatcatcgccatgccattctgagaaaccatgtagagagagctctaggggttctaaagaagcgatttcccatcctgaaagtaggcactttccatcggataaagaaccaagtgcggattccagcagctgctgcagtgttccacaacatgatccggttgcttaatggtgatgagggctggttggacaaccaacctgataatatagaacctactaattttgtcgatctaccagaaggtgacagtgaataccaaaatgatgtgccatctcttagcaatcaaatgatcagtgggaataatattagagatatgattgctaagaagatgtgggaagattatgttcgtaactagcaagaatagtatagataatattttggttttgcatgatttgtatttatttatgcaatcaacatttatgatatggacaaattaatagtaagcaacgtagtttgtattttctcattcaataaaatattgcaatatagttatgatgtttggaagactatctccgaaagcaagcctattgcagcagcaacaaaggcatccacaaaagaaggcatcaccaaagagctgtagcatacagaagaagaaggcttctccaaaaggtagtatctaacttgtttttttgtgaagtattttcctttcatattaatgattacaaattttacttactataatctaattttgtctaatagctcaacaatcaagagcttcatggaacccgggactagaaaaggctttagttgatttacttcatgagcacaataacccacattaccggtgccaaaacgggtggacaagtgaagcatggaacaaggtcgtcaaagaatttcgtgacagacatccctatgtcgccatgaataagcaacagatccaagataaggagaaggagttaaaacgagattataggttgcttaaggaggcaaggaaacagagtggagcttcttgggataatcaacggtgcatgattgttgccgatgatgctgtttgggcaaacataattacggtatgatattttgagcataattgttttgtcctcattcaaatcactattatttgtattcatgccataattatctgtttttgtatcttgtgcagtcaaatgagaaagtaaggaagttcagcaaaaacaaatcctttcctctctttgaatccttgggtgaactttatgatggtaaatttacttgatgccataattctttgattccttgtgcttacgttcagtgcagccaaccttgttatttgttttcttctctcgttgtttggcactgctaccttctttctttggcttcttcacatatcctgcacctgtactatgttccttttgtatgctgtagtcctcttaggaaacaacaggaacatagctgattagttatgcatagtgacatttctcatatccgcatattggaaatcaatgccaaattatttggttgctcatgatgtttactaagattgaggctttaaatggctgattctgtttgctagtgaacacattcttttttggtgcagtatgatcaatgttccattagttatgcatctcccttctcggatctagtattttccctaataggtatatactgaaacttttgtatgggtagtgaattgcaacctttttttttaggccaaactgctgagggcaacatgaatttcacttctattgagccattccaacatgctactctcacacaagtgaatgaatatcttgagagaagtgactcttttcctgatgtaaattgggttgctgatgatgatgagaccactgaagttcaagatgaagataatgcagtggagcatgaaaatcagggaagccacattactatcacctcaagagctaatggagaaaagaatgtcaagaagaccaaatctactgagagagagagagtagaaaagacaccgaagaggaataagaggaatgatgttgttgatatgatgggaagttacttggagatgagaaaaagacaatctgaggaggaggaagcaaagaagagggaggaggaagcaaagaagagggaggaggcaagcaaggttgatgattgctcaataaggaactgcatcactgttgtggaatcgatggaggagctctcaaatgaagaaaaggtcaaatcttttggagtattcaaggacgcgcagaatagggagatcttcatgagtgcagggcctatgactcgtcttatatggttaagaacgatgctggtaagtttgaattactattgttactagcataatcttaatttgtgcaattctgaaattcaattcttctacacttaaataggtacatttttttagccacgttgcactttgtttatgatgcgattgtgtaacaatgcagaccatgcaagaatgacctttggaccaaaaggatattgtctttccaggtacccgttcatacttttataattttgacatgattttcatgttatatttatgtcaggtttag</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0299600, RefSeq:Os12g0299600

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