BGIOSGA011533

From RiceWiki
Revision as of 09:33, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA011533| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA011533, complete gene.| tag = OS03G01...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA011533

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA011533, complete gene.

LocusTag

OS03G0128500

Ensembl Transcript ID

BGIOSGA011533-TA

Ensembl Protein ID

BGIOSGA011533-PA

Length

3425

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:1835623..1839047

Sequence Coding Region

1839015..1839047,1838806..1838935),complement(1838027..1838133,1837832..1837955),complement(1837592..1837696
,1837372..1837487),complement(1837196..1837279,1837044..1837112),complement(1836878..1836949
,1836682..1836773),complement(1836478..1836605,1836211..1836312),complement(1836077..1836144
,1835623..1835682

Genome Context

<gbrowseImage1> name=IndicaChromosome03:1835623..1839047 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:1835623..1839047 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGAGGAAGCAGGCGGAGTACAGCAACCTCGACGAGAGGTACGCGATCCAGGGGGAGAAGTACCAGGGGCAGCAGTACAGCCACATCTACTTCACGCGACTCCACCACATGCGCAACCTCCTCCACGCCCTCGTCCCCTCCTGGAAGCCGCACCTTCCTGTTACTACTGTGTTGGGACTTGAAGAAGGAAAGGATTGCATAATCGTTGGAACTTTATATAAGCACATGAAATTAAAGCCTTCCATTCTTGATGAATATTCTAAGGAGAGGTCTGCTATTCCTCTTGTTAAACCACACAATTTCATGCATCCTGATGATCATCTCATTCTGGAAGATGAAAGTGGGAGAGTTACACTTGCAGGAGCCATACCTCCAGCAGCATATGTTACTGGAGTTGTAATAGCTTTACATGGGAAAGAAACAAGTGCTGGCAACTTTCTTGTTGAAGATATTCTTGAGGCTGGGATTCCTCCTCAAATTACGTTACCTAGCATAAACGAGGACAAATATGTGGTATTTGTGTCGGGATTAAGTATTGGGAGTGAAAAATTCAATCCTCTGCAATTCCAACTTCTTATAGACCATATCACAGGGCATTTGGGTGATGAGAATGAGCAATCCATAGCATCCAACATAGTACGCGTTGTGGTGGCTGGGAATTCGGTACATATTTCTCCAAGATTCTTCAATGGTCAGGCAGTAGCATCGAAAGATCAATCCAGGATAGCTGAACCAATCAAAGAATTGGATATAATGCTCACTCAGCTTGTGGCATCATTGCCTGTGGACATGATGCCTGGATCTAATGACCCAGCAAATTTTTCTTTGCCTCAACAGCCTTTGCATAGATGCCTTTTTGCTGGAGCAGCCACTTATAACACTTTTTCATCGTGCTCGAATCCACATCAATTCGAGCTTGATAGTGTCCGGTTTATTGGAACATCTGGACAGAACATAGATGACCTCTACAAGTACTCTGATGCCAAAGACAAGCTGGAATTCGTGGAAAGAACACTGCGGTGGCGTCATCTTGCTCCAACTGCTCCAAACAGTCTAGGATGTTATCCATACACAGACAAGGATCCTTTTCTCGTTGAAAGCTGTCCCCATGTTTACTTCGTCGGGAATCAAGATAAATATGAAACTCAATTATTGCAAGGGCCAGAAAAACAAAAAGTGAGGCTGATCTGCATTCCAAGATTTTGTGATAGTGGAGTTGCCGTCATGCTCAATTTGAGGAACTTGGAGTGCAGCACGTTGAGTTTCTCAACAAGCTTCGATGCTTGA</cdnaseq>

Protein Sequence

<aaseq>MERKQAEYSNLDERYAIQGEKYQGQQYSHIYFTRLHHMRNLLHALVPSWKPHLPVTTVLGLEEGKDCIIVGTLYKHMKLKPSILDEYSKERSAIPLVKPHNFMHPDDHLILEDESGRVTLAGAIPPAAYVTGVVIALHGKETSAGNFLVEDILEAGIPPQITLPSINEDKYVVFVSGLSIGSEKFNPLQFQLLIDHITGHLGDENEQSIASNIVRVVVAGNSVHISPRFFNGQAVASKDQSRIAEPIKELDIMLTQLVASLPVDMMPGSNDPANFSLPQQPLHRCLFAGAATYNTFSSCSNPHQFELDSVRFIGTSGQNIDDLYKYSDAKDKLEFVERTLRWRHLAPTAPNSLGCYPYTDKDPFLVESCPHVYFVGNQDKYETQLLQGPEKQKVRLICIPRFCDSGVAVMLNLRNLECSTLSFSTSFDA</aaseq>

Gene Sequence

<dnaseqindica>1..33#113..242#915..1021#1093..1216#1352..1456#1561..1676#1769..1852#1936..2004#2099..2170#2275..2366#2443..2570#2736..2837#2904..2971#3366..3425#ATGGAGAGGAAGCAGGCGGAGTACAGCAACCTCGTAAGCTTCTCCTTCTTTTGATTCTCGAATCACCTCGATTTGTGTTCTGGGCTGAGCAATGGCGATTGGGGGATGGCAGGACGAGAGGTACGCGATCCAGGGGGAGAAGTACCAGGGGCAGCAGTACAGCCACATCTACTTCACGCGACTCCACCACATGCGCAACCTCCTCCACGCCCTCGTCCCCTCCTGGAAGCCGCACCTTCCTGGTCCGACCCCTCGCTTTTTCCTAAATCGTTAGGGTTTCTCTGCTTTGTTTTTGGAGCTTGAACTGTTTTTGGGAGTTGATTGCGATGTAGCATGATGGGTTTAGTTAGGGTTTATGTGCTGGCATGTGGATTCTCTGGTTCGCTCTACAAAATTCTGGGGGCGAAATTTCAGGCCCATTGAGCTCATATTAGGGTTTTAGAAGCAATTTGGCACATCGGCTACGATCTTTGCTCCATCCATAGTGTGAATGTATGACCATCACCTGAGTTTTTTTTAGGGGGTGTTATGAGCTTGTCCTGTGCTAGTTTGTCTATGCTTGCTGAAAATAGTATTCACAAAATACTGATTTGGCATCTTCTATTTACCAATAGATTTTTATTGGTTGGTGAATGTAACTGAACTAAAAAAAACATTTTTCTTACTAAATGCTTCGTCCAGCAGTTAATTCGCAATGAAGCTAGTAATCAATCGTAAGATCTTTTGCTGGCATTATTTAGTCAGTATGAATGTTTGATCTTATGAAATGTGCCTCCTTATTACCAAGATTGAACATTGGATCCATTTGCCGCGTGTCTATCTTAGTTCATGGAAATGGATCGTGTAAGAGACACTTGCTTTTATGCATCCACAGAGCGTTTAAACTTCAAATCACGCCTCTTGCTGTTCTGCAGTTACTACTGTGTTGGGACTTGAAGAAGGAAAGGATTGCATAATCGTTGGAACTTTATATAAGCACATGAAATTAAAGCCTTCCATTCTTGATGAATATTCTAAGGAGGTAATTTAGCATGTCTTGTCTTCTTATCCTTATTAACTTGGATGGCCTCTGAATGAACTATTGTGCTACAGAGGTCTGCTATTCCTCTTGTTAAACCACACAATTTCATGCATCCTGATGATCATCTCATTCTGGAAGATGAAAGTGGGAGAGTTACACTTGCAGGAGCCATACCTCCAGCAGCATATGTTACTGGTATGTCTGATATTTTTCACTGAAAAGTTAAGTTTGCAAATTCTAGACTAGTTTCTTTATGATTGTAGCATTTGTCGAACAATTTTATCCAATATATCATGTTGCTTGGAATACTCACCCGCCAATTGTCCACAGGAGTTGTAATAGCTTTACATGGGAAAGAAACAAGTGCTGGCAACTTTCTTGTTGAAGATATTCTTGAGGCTGGGATTCCTCCTCAAATTACGTTACCTAGCATAAGTAAATTTTTTCCTATCCTGGCTTGCTCATTCTCCATTTTCCCCATTTGCTTACACAAGTTTTGATGGTTAGATCTCTTACATTGGCATTTACCTCTGTTACAGACGAGGACAAATATGTGGTATTTGTGTCGGGATTAAGTATTGGGAGTGAAAAATTCAATCCTCTGCAATTCCAACTTCTTATAGACCATATCACAGGGCATTTGGGTGATGAGAATGTATGCGCCTTTTTATTTTATTTTTCCCAAAATGAAGGTTTTCAAGTGAAGATATGCACTAAATTTAGATGATCTCTTTGCAATTTAATTAGGAGCAATCCATAGCATCCAACATAGTACGCGTTGTGGTGGCTGGGAATTCGGTACATATTTCTCCAAGATTCTTCAATGGTCAGGTAATGTCACTGCATATTACATGTTTTTGGTGAAACTCCATAGCTTTAGTTTATTGCACTAGTGGTGAACACTGATATTTCAGGCAGTAGCATCGAAAGATCAATCCAGGATAGCTGAACCAATCAAAGAATTGGATATAATGCTCACTCAGGTTTCAACCGTTTACTCCCCCCTCAAATATTATCAACGCAATTAATTATTCAGGTTTATGATGTCAGTATGAATGTAATCCATTTCTTCTGCAGCTTGTGGCATCATTGCCTGTGGACATGATGCCTGGATCTAATGACCCAGCAAATTTTTCTTTGCCTCAACAGGTGGGCTATTGACATGGAAAAATAATGACTAATTTGCACTAGTAACATTCAAGCATGTTTTTATGCATGCATGACTAACTTATGTCTTGCTTTTTTTTTGGCAGCCTTTGCATAGATGCCTTTTTGCTGGAGCAGCCACTTATAACACTTTTTCATCGTGCTCGAATCCACATCAATTCGAGCTTGATAGTGTCCGGTGGGTGTTGGTGTTTTTTTAACTTTCCTCAATTAAAGCAGCTGTGGAGTTTGAAGTATGGAAGTTCTGCATGTAGGTTTATTGGAACATCTGGACAGAACATAGATGACCTCTACAAGTACTCTGATGCCAAAGACAAGCTGGAATTCGTGGAAAGAACACTGCGGTGGCGTCATCTTGCTCCAACTGCTCCAAACAGTCTAGGTAACTCTTCAGGCATTTCAGCCCCATTGTGCTATGCTGTGATTGCTTGGTAAAAAACCTGTATTATATCATCCAACTGTTTGTAATTCAATTTCATTATTGATTTAGTGACCATTTTTATAGCAAAGCTAGAACCCTTCTCATGTAAATATCTGTTTCACCCAGGATGTTATCCATACACAGACAAGGATCCTTTTCTCGTTGAAAGCTGTCCCCATGTTTACTTCGTCGGGAATCAAGATAAATATGAAACTCAATTATTGCAAGGTACTGCTTCATGTAAGGTTCCTATGTTGTTTTAGCGCCCAACTAAACATATTTGTCATCATGCAGGGCCAGAAAAACAAAAAGTGAGGCTGATCTGCATTCCAAGATTTTGTGATAGTGGAGTTGCCGTCATGGTAAATACCTCTAGTTGTATGCTGACTATTGGTAAAGCTGCGCTGTTTTATCTTTGCAATCTAGAAAGTTATAAGGAGGCCAAGTCATCAAGTGGGGATTAGCTCCTTTTACACATCGTAAAAAGTTCACGAATGATGAACCAGTAAAACAATTTCATACACTTCTTTGTGGAAGATTTAAAAAACCATGACAAACCAGAAGTCCTCTTTGAAGATGGACACTTTTCCTTTGGTCTTCTGTCTTAGTATAGTACATAGCCTTGATTTATGTATGCGTATGCAAACATTTTTCTTTGCCCTTTTTTTGTATTCTAACACTTAACATTGTTTTTTATATGCATTATTGCATACACAGATAAATTGCTGACAAACACAAGTATATATTTTAATGCAGCTCAATTTGAGGAACTTGGAGTGCAGCACGTTGAGTTTCTCAACAAGCTTCGATGCTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA011533