BGIOSGA011542

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Revision as of 09:33, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA011542| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA011542, complete gene.| tag = OsI_098...")
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Gene Name

BGIOSGA011542

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA011542, complete gene.

LocusTag

OsI_09813

Ensembl Transcript ID

BGIOSGA011542-TA

Ensembl Protein ID

BGIOSGA011542-PA

Length

3765

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:1742107..1745871

Sequence Coding Region

1745653..1745871,1744863..1744925),complement(1744681..1744752,1744385..1744492),complement(1744213..1744293
,1743925..1743978),complement(1743718..1743843,1743542..1743631),complement(1743267..1743389
,1743043..1743153),complement(1742689..1742805,1742497..1742553),complement(1742325..1742399
,1742107..1742187

Genome Context

<gbrowseImage1> name=IndicaChromosome03:1742107..1745871 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:1742107..1745871 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGGAGGCGGAGGCGGAGGCGGCGGGGGCGGGGGCGGGGGCGGGGGCGGGGCCGGCGAGGAGGACGACGAGGGTGGGGCGCTACGAGCTCGGCAAGACGATCGGGGAGGGGAGCTTCGCCAAGGTCAAGGTCGCCCGCGACACGCGCACCGGCGACACCCTCGCCATCAAGGTGCTCGACCGCAACCATGTGCTTCGCCACAAGATGGTCGAGCAGATCAAACGGGAGATTTCCACAATGAAGCTAATAAAACATCCAAATGTGGTCCAGTTGCATGAGGTCATGGCTAGCAAATCAAAGATATACATGGTTCTTGAATATGTTGATGGAGGCGAGCTTTTTGATAAGATTGTCAATTCTGGGAGACTAGGAGAAGATGAAGCAAGAAGATACTTCCATCAACTTATAAATGCAGTAGATTATTGCCACAGCAGAGGAGTGTACCATAGAGATCTGAAGCCAGAGAATCTGCTTCTTGATTCACATGGAGCTCTTAAAGTTTCAGATTTTGGCCTTAGTGCGTTTGCTCCACAAACAAAAGAGGATGGACTTCTGCATACTGCTTGCGGAACACCAAATTATGTTGCACCTGAGGTGCTTGCTGATAAAGGTTATGATGGTATGGCTGCTGATGTATGGTCCTGCGGCATAATCTTATTTGTCCTCATGGCTGGATATTTACCTTTCGATGACCCCAACCTAATGACCCTTTACAAACTGATCTGCAAGGCAAAAGTTTCTTGTCCACACTGGTTTTCTTCAGGTGCGAAGAAGTTCATTAAGCGCATACTTGATCCTAATCCCTGCACAAGAATAACAATTGCACAAATTTTGGAAGATGATTGGTTCAAAAAGGATTACAAACCACCACTTTTTGAGCAAGGTGAAGATGTGAGCCTTGATGATGTTGATGCTGCATTCGATTGTTCAGAGGAGAATCTCGTGGCAGAGAAGAGAGAGAAGCCTGAATCCATGAATGCGTTTGCTCTAATTTCAAGGTCACAGGGATTCAACCTTGGAAATTTATTTGAGAAGGAAATGATGGGAATGGTGAAGCGGGAAACTTCCTTCACATCTCAATGTACACCACAGGAGATCATGTCTAAAATAGAGGAAGCTTGTGGACCTCTTGGTTTCAATGTGCGGAAACAAAATTATAAGATGAAGTTAAAAGGTGATAAGACTGGAAGAAAAGGCCATTTATCTGTAGCAACGGAGGTTTTCGAGGTTGCTCCATCACTCCACATGGTTGAGCTTCGTAAAACTGGAGGGGACACGCTGGAGTTTCACAATTTCTACAACAATTTCTCGTCAGAGTTAAAAGACATAGTGTGGAAATCTGAATCTGACGCAAAAGCAGCAAAGAAGAGGTGA</cdnaseq>

Protein Sequence

<aaseq>MAEAEAEAAGAGAGAGAGPARRTTRVGRYELGKTIGEGSFAKVKVARDTRTGDTLAIKVLDRNHVLRHKMVEQIKREISTMKLIKHPNVVQLHEVMASKSKIYMVLEYVDGGELFDKIVNSGRLGEDEARRYFHQLINAVDYCHSRGVYHRDLKPENLLLDSHGALKVSDFGLSAFAPQTKEDGLLHTACGTPNYVAPEVLADKGYDGMAADVWSCGIILFVLMAGYLPFDDPNLMTLYKLICKAKVSCPHWFSSGAKKFIKRILDPNPCTRITIAQILEDDWFKKDYKPPLFEQGEDVSLDDVDAAFDCSEENLVAEKREKPESMNAFALISRSQGFNLGNLFEKEMMGMVKRETSFTSQCTPQEIMSKIEEACGPLGFNVRKQNYKMKLKGDKTGRKGHLSVATEVFEVAPSLHMVELRKTGGDTLEFHNFYNNFSSELKDIVWKSESDAKAAKKR</aaseq>

Gene Sequence

<dnaseqindica>1..219#947..1009#1120..1191#1380..1487#1579..1659#1894..1947#2029..2154#2241..2330#2483..2605#2719..2829#3067..3183#3319..3375#3473..3547#3685..3765#ATGGCGGAGGCGGAGGCGGAGGCGGCGGGGGCGGGGGCGGGGGCGGGGGCGGGGCCGGCGAGGAGGACGACGAGGGTGGGGCGCTACGAGCTCGGCAAGACGATCGGGGAGGGGAGCTTCGCCAAGGTCAAGGTCGCCCGCGACACGCGCACCGGCGACACCCTCGCCATCAAGGTGCTCGACCGCAACCATGTGCTTCGCCACAAGATGGTCGAGCAGGTCCGCCGCCTTAATCATCCTCAAAATTGAATATTTATCTCTTTTTTTAGACATCAGGTAATAACAAGTTGGATCTTTTCTCGGAGGGGATCGAATTAAGAATCCTAAATTATTCTAGATAGATGCTAAATTATTATAAAAGATGGATCTTCATGGGGATTAATAAACATTAAACGAGAATATGCGCTTACTACGTCTCTACCATTGTCAAGATTCTGTCTGTTTGGATTGTTTGTGATTGAAGAAAGGTCATGTGTCCGCCTGTCCAGCGGGCTAAATCTGCTCTGATCTAAAGGAAATTAGATGGAATTGTATCAAGTTTGAATCGGAAATGTAACAACAGATTATCAAGCTGGGCCATGTAACCATAACAATATCTCCGATGCGGTGATGCCAACCCTGTCTTAATCAAATGCTTTCTGGCTAGCAAAAAGCTGTGCTAGCTTTGGTGTTCGTAGGAGTGGCAAGAGTTGTTCTAGATTCATTTTTTTTTCTCGGGGAGTTATAAATTCAGTCTGACTGGGGGGAAACTCGGGTATTGTACATTCCGTGCTAGATCACTCATTGGTTGATGCATTGTTTGGTGGAAAAACTAGTTTTTTTTTGGTTAAATATGTGATTTTCCATATGATGTGTTGGCACAATTAAATGTCCCTGCTCGAGCTGTTCTGTTTTCCAGCTTGAACTTTCGATTGTGAATGATAACCTCATATTCCACTTCTATCAGATCAAACGGGAGATTTCCACAATGAAGCTAATAAAACATCCAAATGTGGTCCAGTTGCATGAGGTACTTTGCTATCTTTGCAGGAACAATAGCGTCATTACCACTCATACCCTTCTTTTTTTTTTATCTCATCTCATTCAATGAGAATTTTACATTCAATGTGTGTTTGACAGGTCATGGCTAGCAAATCAAAGATATACATGGTTCTTGAATATGTTGATGGAGGCGAGCTTTTTGATAAGATTGTAAGGCCCATGAACTTTCTGTGCCAGATATCACGATTCTTATTTTTGTTTATGTACAAATTGCTTTTACATGCTGTAAGAGTAGCTTGTTGAACCGGCACATTTGACTGTTTTGATACTGACTGACTAATCCGCAGTTCTTGGACCATACAAGTTGACCCATTTATCATCATGTTATTATCAACTAGGTCAATTCTGGGAGACTAGGAGAAGATGAAGCAAGAAGATACTTCCATCAACTTATAAATGCAGTAGATTATTGCCACAGCAGAGGAGTGTACCATAGAGATCTGAAGGTTTGTTGAATTATCCTGCTTACCTCCTTTCTGGGTAATCTCCACTGGGATGGATGTATTCTCATTCATATTTTTTATGTGCCATTTGCAGCCAGAGAATCTGCTTCTTGATTCACATGGAGCTCTTAAAGTTTCAGATTTTGGCCTTAGTGCGTTTGCTCCACAAACAAAAGTATGATATCTAGCTAGTACCCAGAAGTATGTTTTTGTAGTCGTTAAAAAATTAACCAGTTTCTTTATCCTAATGTGATGTGTTTGGGTTTTCTAGCATTTTTCTGGTTTAATTGACTTGTTCCTTAACTTGCACTATTACCTCAAATGAACTTCGGACGCATAATTATTTGTTTTGGTGACAAGAAAGTTGAAAGAAGTAACTTTGGTAAACTATTTTGATTGTTTTATTTAGGAGGATGGACTTCTGCATACTGCTTGCGGAACACCAAATTATGTTGCACCTGAGGTGATTCATGTTGCCTTTGATTAAACTCGTGTATTTTCTCCAAAAAGATGTAAGAATCATATATTCATACTGTTCCCTCAGGTGCTTGCTGATAAAGGTTATGATGGTATGGCTGCTGATGTATGGTCCTGCGGCATAATCTTATTTGTCCTCATGGCTGGATATTTACCTTTCGATGACCCCAACCTAATGACCCTTTACAAACTGGTAAGTATGTGTAACATGCACGCATTCTAATGTTTCTTGTGAATTTCATTGGTAAACTTGATAGACTTTTGATGTTCTCTTCACAGATCTGCAAGGCAAAAGTTTCTTGTCCACACTGGTTTTCTTCAGGTGCGAAGAAGTTCATTAAGCGCATACTTGATCCTAATCCCTGCACAGTAAGTGACAATTAAGGACATATATCTTCAGCTAACCAGTTTGACCAGCTGACTGCTGCTAGTCCAATGAGTTTCATTGTATATCCTCTTTGAAGCCTTTTATGATGGCAATTTGAGAGAAGTCAGAAAACAATGAGCTATATTCTTTGCAGAGAATAACAATTGCACAAATTTTGGAAGATGATTGGTTCAAAAAGGATTACAAACCACCACTTTTTGAGCAAGGTGAAGATGTGAGCCTTGATGATGTTGATGCTGCATTCGATTGTTCAGAGGTAATGCTAGCTGAACATTTATCTGTAACCTGCATCCTTTCCCAAAAATACGATTTGTAACCTGAGTTAAAACCACTTCTTTGTTTGCTACGTTTGTTTGTTTGACCTTTCAGGAGAATCTCGTGGCAGAGAAGAGAGAGAAGCCTGAATCCATGAATGCGTTTGCTCTAATTTCAAGGTCACAGGGATTCAACCTTGGAAATTTATTTGAGAAGGAAATGATGGTAGGTTTTGATAGAGTCCAATATTATAATTCCATGTTGAGAATATGTTATGCGCTAGATAGATTGGAGTGCTTCTTTCTGGAAGCTGGTATCGGTTAATATAATTTTGCTAATATTTTCCTCTTTTCTTTATGTGCTAAGTCCGACAGAACAATTATGTTTTGATCAATTTATCATCCTATTAGCTGTACTCCTTAATCGTTTACTAAATAGTCTGAGTCTACCTAATATATATAGGGAATGGTGAAGCGGGAAACTTCCTTCACATCTCAATGTACACCACAGGAGATCATGTCTAAAATAGAGGAAGCTTGTGGACCTCTTGGTTTCAATGTGCGGAAACAAAATTATAAGGTTTGTAGCATTTTAGACGGCTATGTATTGACTAGTTTGCTTTATGTGGGTTTCTGTTAGTTTCCTTGAGAATTTGCATCAGTATGTTTGCCATTCAGAAGTAACTTGGATTTGTTCTTTTTTGTTGGGCTCCAGATGAAGTTAAAAGGTGATAAGACTGGAAGAAAAGGCCATTTATCTGTAGCAACGGAGGTACTGGAAACTAAATTGACATGTATCTGTTAAGTCTGTGCAATGCTTTAGTAACTTTTGCTTTAATAAAAGAACTTATTCACATGCTATCTCACAGGTTTTCGAGGTTGCTCCATCACTCCACATGGTTGAGCTTCGTAAAACTGGAGGGGACACGCTGGAGTTTCACAATGTATGTTATCAAACTTTGCATATTCTATCATTTCATAGTGGGTCATTGAAAAAAAAATCATTTCATAGTACCCAGCATCTAGTTGTTTCTTGATGATTTCAGAACGATTAACGTCATTTCTATCAAATTGCATGCAGTTCTACAACAATTTCTCGTCAGAGTTAAAAGACATAGTGTGGAAATCTGAATCTGACGCAAAAGCAGCAAAGAAGAGGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA011542