BGIOSGA011547

From RiceWiki
Revision as of 09:33, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA011547| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA011547, complete gene.| tag = OS03G01...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA011547

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA011547, complete gene.

LocusTag

OS03G0125700

Ensembl Transcript ID

BGIOSGA011547-TA

Ensembl Protein ID

BGIOSGA011547-PA

Length

5110

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:1664043..1669152

Sequence Coding Region

1668939..1669152,1668223..1668284),complement(1666978..1667169,1666346..1666403),complement(1664247..1664308
,1664043..1664159

Genome Context

<gbrowseImage1> name=IndicaChromosome03:1664043..1669152 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:1664043..1669152 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGACGTCAGCCAAGCCACCGAAGAGCAACTTCCTTCACACGGCCAGCACCAGAGCTCCTTGGAAGAGACTGCAACATGTCATCATTGCCGAGCGTCGCCGCACCCCCATCAGCAAGCAGCTTCGACTTCATTAGCAGAAACAACCGAAGAGCGTGTTACCCACCACAAGAAAGAAGCGGACCCAAGAAGGCGAAGGCCTCACCGAACAAAAGCTTACCTTGATATACCACTCCATTTGGACAAATTGTGGAGAATCCGAACTCTCCCACGACTGTCCTCCACGAGTCCATGGTCGCTGGAAAAGGGTGGAGAAACCAAGAAAAGAGGGGGCGTCGCCGGAGTCGGAGTCGGAAACGTCACGGCGAGCTCCGCGGCGGCGATGGAGAGCTCCCTGGGCGGCTGGCCGTCCTACAACCCGCAAAACTTCAGCCAGGTCGTCCCCGCCGACCCCTCCGCGCAGCCCTTGAATGTCGTACCAGCCACTTACATTGCAACACACAGGACGGGTCCACCTCCCGGTCAAGTGATAACAACAGACCCCAAGAACATCCTGTTGAGGCATTTTTATCAAAAATCCGAGGAAAAGTTGAGGCCAAAGAGAGCTGCACCAGACAACCTGACCCCACAGAACAACGGCAAACAACCAAGAGGCCCTCTCTCTGATGGTGGTGGTAGCCAGGCAACTGCAAGTGGTAGAAGCTAA</cdnaseq>

Protein Sequence

<aaseq>MDVSQATEEQLPSHGQHQSSLEETATCHHCRASPHPHQQAASTSLAETTEERVTHHKKEADPRRRRPHRTKAYLDIPLHLDKLWRIRTLPRLSSTSPWSLEKGGETKKRGGVAGVGVGNVTASSAAAMESSLGGWPSYNPQNFSQVVPADPSAQPLNVVPATYIATHRTGPPPGQVITTDPKNILLRHFYQKSEEKLRPKRAAPDNLTPQNNGKQPRGPLSDGGGSQATASGRS</aaseq>

Gene Sequence

<dnaseqindica>1..214#869..930#1984..2175#2750..2807#4845..4906#4994..5110#ATGGACGTCAGCCAAGCCACCGAAGAGCAACTTCCTTCACACGGCCAGCACCAGAGCTCCTTGGAAGAGACTGCAACATGTCATCATTGCCGAGCGTCGCCGCACCCCCATCAGCAAGCAGCTTCGACTTCATTAGCAGAAACAACCGAAGAGCGTGTTACCCACCACAAGAAAGAAGCGGACCCAAGAAGGCGAAGGCCTCACCGAACAAAAGGTATGAAAGCTTTTGAACCGAAAAAGACTATCAACAGTCGTCGATACGTTGGAACTTCTCCGAAGTGACGCCCCCAAGGAGGACACAACGTGTAACGCCACCGCCGCTCGTTCGAAAGTCGGAAGGAGGTTTTCACCTGGAAATTTGTGGGGATATGAAAGAATGCCATGACAACGCCTCCAAGAAGGGAAACGGCGCCCATGGGCGCCGTCGTCGTCGAACCGGCCCAAGACTCGGCAAGGCTTTCGCCAGCATCTTCACATCACTCACACAAGCACCCCCACATCGATGGCCACAGAATAGTCCATGACGTCTCGCAAGCAGTTATACCTTGACCGTAACCAACAGCAAAGACGGGCCCTTGGCCACCTTCGAAACGCCATCAATCCGCCGAAAAAGATCTTAGATTTCGTTGTTTCACTTAGCCAATTTGCTCAAGGTTTTCGTACATAGATGTCGTCATATATGTCAATAATTCAGTTTTCAGTCTGCATCTGCATCCTCTTGAAATGTCAGCATGCCGGTTCTTGTATCACTTATGGGAGGTCACAGCCTAATCGATACTAGAAAGAGACCGTCTCCTTGTTTCTTTGTACGATTCGATACAGCAGGAAAAAAAACAATGGATGATGAAACGCCGGCCTCTCTCTTCAGCTTACCTTGATATACCACTCCATTTGGACAAATTGTGGAGAATCCGAACTCTCCCACGACTGGTAACAGAAAGGACAGGCTACTGATCGCTGTCGGATTAGCGGCAATTGTCCCTTCTTAATGATCGAGACTCTGAGCTAGCCCTGACTTGATTTAGTATCTGTCTAAGGATACGGCTCCTGCACGAATCTTATCTTGCGGTTTACTTGCAACAATAGATCATGGATCTATCACCCCTATTTACAGAAACAAAACTCATTGCTTTTAAAGAACTCACATTTTCGGGTAACCTTGTTGTCCCTTGTGGGTTGTGGTTGTGGCAAGGTCCTTTGAACCCACCATCTGAATTCAAGTTGCAAACTTACTACATATACTATTTTAGTGATAGACAATCTATATGTTGATAGGAAAATGTCGGTGATGATTTTATCAATTTTAAAATATACCGGTCCAATCCTCGAATGCGTTTTTACCTGCACATTCGGTGAGTGCGAGAAGCTTGTGGTGACTTTGTCATTATTAAGACATATACTTTTAAAGGTGATTATACGGATAGGGTATGTATATATGTATGCATTTGGTAAGTGTGCTCGTATGTAATTGAACGTGCGTGGTTGTATTGTGTTTTGTTTTTTTTTGAAAAAAAGAACTTATGAATCTTGTACTATTGTCTGTCTTAATTCATTAATTCATTCGTTTGACGACAATTATGTATATATTTGCCAACTTCGGGTGGCGGTTCTCTAATAGAATTCAATAGTTATGGCATATTTTTCTTCTGTTGGTGTGTATTAGTTTATGTTTGCTTAGCTTTGTTTGTGCTATCGTGAACTTTCTATGTGAGTTTTGTTCTGTGTGAGTTCTGTAATAATTGGCTGTAACTCTTTGAGTAAAGGCCGGAATATTACATTCCATTATCTAAAAGAATTAATTCATTCGTATAATCGTGGTATTATCTGATAATAACACAATTACACAAGACAACGCTAAGCACAAATGTATAGGTAGAAAATGGGCCTTAAAGCCCATTTGGCCAGTGAAATCTAAGGCCCAAAAGATAGCAATAATGGGCCGAAACCCGAAAGTTAATGTTGACTCTGTGTGCTCCATTATAGTCCTCCACGAGTCCATGGTCGCTGGAAAAGGGTGGAGAAACCAAGAAAAGAGGGGGCGTCGCCGGAGTCGGAGTCGGAAACGTCACGGCGAGCTCCGCGGCGGCGATGGAGAGCTCCCTGGGCGGCTGGCCGTCCTACAACCCGCAAAACTTCAGCCAGGTCGTCCCCGCCGACCCCTCCGCGCAGCCCTTGGTCGGTCAGCCCCTCTGTGACTCTGTCCCCCCTCACTCGCGATCGATCTCTGTGCTTAGCTGTCGTGATCTCATGCCTCCGACCGCCAAGTACAATTCAGAATTAGGTTGATTGTGTTGATGATGCCATGAATTGTGTACCTGATCCCTCACGCCGGAGCTTTACCTCTAGTCAGTCCTATTGTGTGTCAGAGCGTGTGTCTGAAATTCCAGTGCGCATGATTAACAAAAGGTGGTTAGTACTATTTGTTTCTAAGTCCCAATGCCAAATAGTTGGATCATAATATCTCATTTGGGAGGTATTTGTGAATCATGGATTATACATTTAGGATTTGGTTTCTCTCATGGCCAACGCCCTTTAAGGTTTCAGTTGTGGTGATGAATTACTAGTCGGTTTTTGCTCCGAATGTCATTCCAGGCAGCCACTTGCATTGTAATTTGCAAAGCATATATTCAGTCCGTCATATTTGTGTTTCTCGTCAGAGTATCAAGCTGGCAACTTATTCTCTGGAGTCCGGACATGTTGCATTGGTGCGAAACTGCCAATACTTATCCCTATTTTTTTTGTGTTTCAGAATGTCGTACCAGCCACTTACATTGCAACACACAGGACGGGTCCACCTCCCGGTCAAGGTATCTTGCTCCCTTGTTTCTTTTACCAATGCTGATTTCCCTGTGCTGCTCCTCACTTCTGAGTGTGTGGTTCCTAAACGTTCAAATGTGTATAGTTGAATGTGACTGCTCATTCACATTACATCAAATTCCTTTTACAGTAGTACTCTACATGGCATAGCAGATCCTCTGAGTTGTTTGGTCTGAGCCAAAAAGTGACTATCTTGCCTTTCATGGCTGGCATATTTAACTCCAATCATCTATACTGTTTTCAGTAATGCAGCCTCTTTAGTATCTTCTGAGTGATAGATCCATGAATAGATTCTGTTGGACTGTTAGATATGTCTTCAAAGTCAATATTTTTTGCATTCCCTAGGACTGTAGTTTTGGCTTCTTGATATGTAACTCACATACATTATGGCTAATTTGCCCAGCTTACTTTCAAGTAGTTCCCTTACGACCTTTGTTCTGGTACATTTTTTATAGCTTCAAAGCAAACTTTTCTCTTGGAGTATGACTTTATGAGGGAGAGCAGAAAAGGTTGAGAGTCAGAGAGCCAGGGCCTAGCCGGCAAACTGGAAAGACCAACTAAACCTGATCTTACACCTTCATAGTTGAGTCCCCTTGAATTGATTTGATAAGTTAAATGCTTTTATAATTTTAGCAATCAAATTTTGGAATAACACATTCTAGAGCAACATCTATTTGGACTAGAGGTTGGAGTTTCCTAATGATGAATCAACATAATTTAGTATTTTCGCCTCAGAGACTTTGCTCTGACCCACTATGTGTACCTATTACAATTTTGTATGAGCATTCTGTTAAGTCCTTTTTTTCCTCCTAGCCTAATCTTTTGGCAGGCCAGGCCGAACCACCAGACATCCTGGTTGCTTTCAGGCCTGTCCACTGAAATATCTCCAGATTTCAGGTACAGGTATTCAGTAAAAAATTGATTGCATGCTGCTTACCATCTCCACAAAAGAAAAATGAAAGAAAACTATAGGCAAGCTGGGCAATTTATTAGTAAGGAGCAAATGAACTGGCCAACCAAAGCAACCTCTCATATTAGTCATCTTCCTCTAGTGCTGCCAACATAGTTTTATTGAAGTGTTCTGTTTATGCCATATTGCCAATATGATTTGGATGGTTACATTTATAGAACACAGTTTTTCTTCTCGACTCATTGCCCGTGTGCCTGTTGACAGAGGCCAAAGATGTAAACCATTTCCATTATCTAAAAAAAAAGAACATTGTTTTTAGATATTCTATGTAAACATTGTACTTCATTGATCCGTTGCAGGCATGGAGCTAGTTCCTTAGTTTCCAGTTTATTCAGGGGCTGTTCAGATTGATGCCATTTTCAACCATATCATTTTTTGGCAAAGTTGCCAAAAATGTGCCTACATTTGGTTTGTTGCCAAATTTTGGTAAATACACAAGAAATCCTGCTAAAATTTTGGTAATATTGTCAACTTGCTAAAATTTTAGGTAAGGTTTATTTTGGCAACAATCTGAACAGCCCCTCCGTATTTTTGCTGTCTATTCCCTCTTGAATTTCCTGTGCATGGGATATTGCTTCTGATAGTGGTGAATTCTTGAGTGCTTTAGTTCATTAGAGCAAGTTTAATAGTATAGCCCACTGCTAACTCCAATTCATCTATAGCCAATCTAATAGCCAATTCATACAATAGTTGCTTACTATACTATTAATATATGGTCGCACCTGTCATACATACATTGTGTCTTAGAGTCCGCGATGCATCTGGCTACAGATCTATAGCCCGCTGCTCTTCTCTCTCATCCTTTCTCTCATTAAAATATGTTTACAGCTGGCTAATAGCCTGCTATTGTACCTGCTCTTAGATATTTTCATAGTCGATCAGACTCGATAGTTGCTCGCTCTCTTTACCTCGTTTTGGTTCTTTCTGGGCTCTCGTCCATTCCTACCAGAACTACCCCAACTATTCCAAGTTTTCTTTTTTACTGTACAGAAATCACCTCTTTTTTTTTTGTTGCTATTTTCACTATTTCCCTGACCGTTTGTGTCTGGAATCGCAGTGATAACAACAGACCCCAAGAACATCCTGTTGAGGCATTTTTATCAAAAATCCGAGGAAAAGGTGCGCTGCTAAGAGCCTAAGACTCTCACAAAGGTTACATAAATCAGTATGGAACATCTATTTATCAACGCTTTATCTTGACTGTAGTTGAGGCCAAAGAGAGCTGCACCAGACAACCTGACCCCACAGAACAACGGCAAACAACCAAGAGGCCCTCTCTCTGATGGTGGTGGTAGCCAGGCAACTGCAAGTGGTAGAAGCTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA011547