BGIOSGA011563

From RiceWiki
Revision as of 09:33, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA011563| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA011563, complete gene.| tag = OJ1705B...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA011563

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA011563, complete gene.

LocusTag

OJ1705B08.1

Ensembl Transcript ID

BGIOSGA011563-TA

Ensembl Protein ID

BGIOSGA011563-PA

Length

3363

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:1343327..1346689

Sequence Coding Region

1346561..1346689,1346206..1346296),complement(1346061..1346113,1345871..1345963),complement(1345721..1345792
,1345077..1345149),complement(1344754..1344799,1344448..1344511),complement(1344312..1344365
,1344159..1344236),complement(1343327..1343419

Genome Context

<gbrowseImage1> name=IndicaChromosome03:1343327..1346689 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:1343327..1346689 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGGCTTCGACGGCGGCGGCGGTGGCACCGGACTGGTGGAACGACGTGAACAACTCGCCGATGTGGCAAGACCGCTCCTTCCACGCCCTCGCCACGCTATACGGCGCCGTCTCGTTCGTCGCGCTGGTCCAATTGATCAGAATCGAATGTAGAGTACCTGAGTACGGATGGACGACACAGAAGGTGTTCCATTTCATGAACTTTATTGTGAATGGAGTGCGGTCAATCGTGTTTGTGCTCCGACGAGATGTGCAACTTGTGCAGCCTGAGGTATTTCAACATGTGCTCATTGATTTTCCGGGGCTTGCATTCTTCACAACCTATGCTCTGTTAGTGCTCTTCTGGGCTGAGATTTACTATCAGGCACGGGCAATGTCTACTGATGGGCTCAGACCAGCTTTTTATACAATCAATGGAGTGGTCTATGCAATCCAGATAATACTTTGGATGGCGTTGTGGTGGAAACCAGTTCGAGCAATGGTCATCTTGTCTAAGATGTTCTTTGCAGCGACATCTTTATTTGCTGCCCTTGGATTTCTTCTCTATGGAGGGAGGCTATTTCTGATGTTACAGCGTTTTCCAGTTGAATCAAAAGGAAGGCGTAAAAAGTTGAATGAGGTTGGATATGTGACAACCATATGCTTTTCTGGCTTCTTGATCAGATGCGTAATGATGTGCTTAAATGCGTTTGATAAAGAAGCCGATCTTGATGTTCTGAACCATCCAATCCTAAACTTCTTCTACTACTTGTTGGTTGAGATTGTACCTTCAGCTTTGGTGCTTTTCATATTAAGGAAACTACCACCTAAACGGGGGATCACACAGTACCATCCAATCCATTAG</cdnaseq>

Protein Sequence

<aaseq>MAASTAAAVAPDWWNDVNNSPMWQDRSFHALATLYGAVSFVALVQLIRIECRVPEYGWTTQKVFHFMNFIVNGVRSIVFVLRRDVQLVQPEVFQHVLIDFPGLAFFTTYALLVLFWAEIYYQARAMSTDGLRPAFYTINGVVYAIQIILWMALWWKPVRAMVILSKMFFAATSLFAALGFLLYGGRLFLMLQRFPVESKGRRKKLNEVGYVTTICFSGFLIRCVMMCLNAFDKEADLDVLNHPILNFFYYLLVEIVPSALVLFILRKLPPKRGITQYHPIH</aaseq>

Gene Sequence

<dnaseqindica>1..129#394..484#577..629#727..819#898..969#1541..1613#1891..1936#2179..2242#2325..2378#2454..2531#3271..3363#ATGGCGGCTTCGACGGCGGCGGCGGTGGCACCGGACTGGTGGAACGACGTGAACAACTCGCCGATGTGGCAAGACCGCTCCTTCCACGCCCTCGCCACGCTATACGGCGCCGTCTCGTTCGTCGCGCTGGTAAGCCCTAGCCCTACGGGACACGTTAGAATCGATTTAGGTTTTGAAAAACATGGGCTAATAATAGGGGAGGATATTGGGTCGTGTAGCCGAGCAGTTTGGAAGTTTCGTCTTTAATTGTCTCGATCGAGGGCTTAGATTTGATTTAAGCTGATGTTTTGTGCGGGAACTTTGTAGCTTACCGTATGCTTGAATTGTATAGTGATGGAGACATGGGCATCAGTCTCATTTGAGTCGTTTGCACTTTTGGGAGAATTTTTGCAGGTCCAATTGATCAGAATCGAATGTAGAGTACCTGAGTACGGATGGACGACACAGAAGGTGTTCCATTTCATGAACTTTATTGTGAATGGAGGTGAGCATACTTTTGCACTTTGCCACTACTTCATTGATACATGCTAGCTTTTTCGGAACTTCAGTTTATGATTTTGGACTGGTTTGTTTCAGTGCGGTCAATCGTGTTTGTGCTCCGACGAGATGTGCAACTTGTGCAGCCTGAGGTTTGTGGGGGGAACAGTTTATGTTTCTCTGACTTGTTTCTGCAATTTTTTTCGAAGGTGCAAAGTAGGAATGATGCGTAACCATATGGCATTGTAGGTATTTCAACATGTGCTCATTGATTTTCCGGGGCTTGCATTCTTCACAACCTATGCTCTGTTAGTGCTCTTCTGGGCTGAGATTTACTATCAGGTTAGTTTTACTTGGATATATTTTGGTTTTGTCCCATGGGTGTTTTTGTTCTCATTGGTTCATGATGGCATTTGTTAGGCACGGGCAATGTCTACTGATGGGCTCAGACCAGCTTTTTATACAATCAATGGAGTGGTCTATGCAATCCAGGTGACTTCGCCATCCACATTTCTTACTGTTGATATAATTGCTTCTCTCTACAAACTCATACATGAAACTCATTATCATGATAATTGGAAAACTTGTTACTGGATGGATCATCCATTGATAATGTAAAGTGATTGGATGAGTCCCAATTGAATTGTTATGTTTGATAGTATGCTATCAGAAAAAAGGTTAAACAGAGAAAATAAAGCAAACACTATCATAAAACCCTCGAAATAAGTTAGTTAGCGTAGCATGATTCCAACTGACTAAATCTTGACTGCATAATGTACAATTACTCATCATTGCACAAATAGTTTATTTTATTGTGGAGACAATGATGGCTGTTAGCTTGTGGGGACTCCCTGGATGTACACTTTCTGTTGTGCTACATTTTGGTGGGCATGGATGTCAAATTAACCTACCACTTGCCATTCAGAGCATTTTTCAGTGTGGACATGTTCACAAATTTCTACCGTATTGAGAGCATATTTCAATACATAGAATTACACAAAGTTTTGCTACCTTTCCTTTTTGAAGTACTTTTGGAATGATCTGATCTTTGCATGGTTTTCAGATAATACTTTGGATGGCGTTGTGGTGGAAACCAGTTCGAGCAATGGTCATCTTGTCTAAGATGTTCTTTGCAGGTAAATCTTGTGTAATTTGCCTTGTCTTGCAGTTAGTATGGATTTTTTATTTTGAATGAGAGCTTGTGGAAATCATAGCTGGAGATAGATGGGAAAACTATCTGATCATAAGTTAAAAAAATTCTCGCGCACGTTTAGTTCCTCACATCCCCTAAATATTAATGAACATGAAGGAAATACATTGAGTCATGATAAACCAGGCGTAGTGCAATTTTGAGTTTTCTTGTTATACATGATAATTTATCATTTATTCTACTAATACAAAGTTATTTGCCAGCGACATCTTTATTTGCTGCCCTTGGATTTCTTCTCTATGGAGGGAGGTAAGCTGTCCTTGGTTTTCTTATTTTTGTTGTTTTGGGTGTTTGTCTTTTGAATTATGGACAAGAAATTAGTATGCTTCTGAAGTTATTTCCCACATGTTATGTCCATGAGCTTTTGTATATTGGATTATTTGGAAATTGGAAGTAGGCATGCCTGGGTGGGTGTGCAGTTATTGGGTACTGGTTGCGGTGATTCTTTTCATAGCATGTTACTTAGTGTAATTTTGTGGTTATCTTTGTAGGCTATTTCTGATGTTACAGCGTTTTCCAGTTGAATCAAAAGGAAGGCGTAAAAAGTTGAATGAGGTACTATCTTTTATCATTGGCTTCTATTCCAGAATTAATACTTTAGATAATTTGCATTTCTAACACATCTACTTTTTCATAGGTTGGATATGTGACAACCATATGCTTTTCTGGCTTCTTGATCAGATGCGTAATGGTACGTCCTATGTCAATATTATGTTAGGGAGGTCTTCAGACTTTAATTACTCCACTTAATTAGAGCATCTTACAGATGTGCTTAAATGCGTTTGATAAAGAAGCCGATCTTGATGTTCTGAACCATCCAATCCTAAACTTCTTCTACTACTTGGTATGTCTTCCTGTTCACTTGCTTTGTACTCAACCTTGTAGTTTTATACATTGTTTTTGTTTATCTCGTGGCATTTATATCTTGATCTCCTCTAATGTCATTGTTGTTTAATGTTAGAGGCTCTGTGTTGGTCATTTTAATTTGCCATGTTCGAATGTTCACATCGAGGAAATCATTTCTTACATAATTTTAACTGGTGTCAAACAAGGGATAATGCTAGAATGTGATATAGACTTGTGGAAGATATGTTTCTTTTGCTTGTTTTTACCCTGATTGGAACATGGGGCACATGGTGGGTATGCTGATATCCTAATTAAGTGATTGTGTTTACAAAAAGAGCTGAACTGAAATTCTGTTGGGAATGTGACTCAAGGAAAAATGGTTTTGCTACATTGTATAAAACAAGAGAGGAAACTAGTGAAAGCTATTTATTTGGCAGAACACAGAAATTGTATGTGCTTATCTGTGCATAAGCATTCCAAACTATAGCATATTGATTTTGCCGAATGAGTTTACAAAATGCTTTTGCTGTTGGAGTATATTCAGATTGTATGAAGTAATTGAGACTCAAGACAGTCACTGCCATATTTATTTGCTTTTGTAAGAATGGTCATTAAAAAATGGCTTGCCAAGAATAAACTGCAAAAGCAATTTCTTTGTCGTGTTATTTTGAATATGTCTAGACCAATAATTGTACTTACTGAGTGCTTGTTGATAGCGTTCATTTTCTCTTTGGCAGTTGGTTGAGATTGTACCTTCAGCTTTGGTGCTTTTCATATTAAGGAAACTACCACCTAAACGGGGGATCACACAGTACCATCCAATCCATTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA011563