Os12g0405200

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Revision as of 10:28, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0405200| Description = Similar to Conserved NnrU/NnuR ortholog membrane enzyme| Version = NM_001073157.1 GI:115488275 GeneID:4352042| Lengt...")
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Gene Name

Os12g0405200

Description

Similar to Conserved NnrU/NnuR ortholog membrane enzyme

Version

NM_001073157.1 GI:115488275 GeneID:4352042

Length

3208 bp

Definition

Oryza sativa Japonica Group Os12g0405200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:12352530..12355737

Sequence Coding Region

12352594..12353004,12354604..12354750,12354838..12355047,12355195..12355530

Expression

GEO Profiles:Os12g0405200

Genome Context

<gbrowseImage1> name=NC_008405:12352530..12355737 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:12352530..12355737 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcctcccatctcctcctccgccttcccgcccctcccccgcttctcctacacttcccgcagcggcgagtgaccctgccacagagccgggtgtcccccacggcgccgctgctcggggcccgcctcgtcttctccccagcctccgccgtccgtccggcccgggcgagggggtcctcgatcggcggcgcgggggaggacgactcagacggcgaggtggacggggccccgcgcctcgtcggggaggactcggcggcgttccggctgggcgaccagcgggtggcgtcgtgggtctacttcggcgggatactcgccgtggtgctgtgggggctcaacgtgctgtggatcgacccggccaccggggtcgggaccaggttcctcgaggccgtcgccgccgtctccgacaaccacgaggtcactatgctgctccttaccatcatttttgctgtcgtccatagtggtatggcaagcttacgtgaaactggtgagaaaataataggggagagagcttaccgtgtaatgtttgctggaatctcactgcctttagcagttagtactgttgtctactttataaatcatcggtatgatggcattcagctatggcaagttcagggtatttcaggcatccatgagcttgtttggctctcatctttcatctcattcttctttttgtatccatctactttcaatcttttagaagtggcagctgttgacaagccaaaattccacatgtgggaaactggaataatgcgcatcactagacatccacagatggttggacaggtaatttggtgcttagcccacacgttatggattggcaattcagttgctgttgcggcatccgttggattaattggtcaccatctgtttggtgtttggaatggtgataggaggctggcatcacgctatggtgaagcctttgaagttctgaaaaagagaacaagtgttattccttttgctgcagttatcgatggaagacagaaactacccaaagattattacagggagttcatccggttaccatatctcgcaatcactgcattaactttgggagcatactttgttcatcccttaatgcaggcgtccagctaccaactcccttggtga</cdnaseq>

Protein Sequence

<aaseq>MASHLLLRLPAPPPLLLHFPQRRVTLPQSRVSPTAPLLGARLVF SPASAVRPARARGSSIGGAGEDDSDGEVDGAPRLVGEDSAAFRLGDQRVASWVYFGGI LAVVLWGLNVLWIDPATGVGTRFLEAVAAVSDNHEVTMLLLTIIFAVVHSGMASLRET GEKIIGERAYRVMFAGISLPLAVSTVVYFINHRYDGIQLWQVQGISGIHELVWLSSFI SFFFLYPSTFNLLEVAAVDKPKFHMWETGIMRITRHPQMVGQVIWCLAHTLWIGNSVA VAASVGLIGHHLFGVWNGDRRLASRYGEAFEVLKKRTSVIPFAAVIDGRQKLPKDYYR EFIRLPYLAITALTLGAYFVHPLMQASSYQLPW</aaseq>

Gene Sequence

<dnaseqindica>65..475#2075..2221#2309..2518#2666..3001#cccctcccaccaccaccaccaccaccaccaccaccacgcacctctcccctccccgccgccgccgatggcctcccatctcctcctccgccttcccgcccctcccccgcttctcctacacttcccgcagcggcgagtgaccctgccacagagccgggtgtcccccacggcgccgctgctcggggcccgcctcgtcttctccccagcctccgccgtccgtccggcccgggcgagggggtcctcgatcggcggcgcgggggaggacgactcagacggcgaggtggacggggccccgcgcctcgtcggggaggactcggcggcgttccggctgggcgaccagcgggtggcgtcgtgggtctacttcggcgggatactcgccgtggtgctgtgggggctcaacgtgctgtggatcgacccggccaccggggtcgggaccaggttcctcgaggccgtcgccgccgtctccgacaaccacgaggtgcgccggtagatatcgttttcccttccagaaaattgcttttcgcttctcttgtgttaattagtgtactttgagaggagagcctctttactttttttttttggccaaacctaatatttctgcgttttatatactgaattaataattcagtatggactaaatatgcatgcttttagtcaacctgtactgactagtgaaatgacaaaccagtgcagattccattttgatgctctgtggcatgtaggtagttcaacgctttttagtttggactgccaatgaagcaattgaatgtgatattgatttcttgtgtgcttctagtttcggtaattcaaacataaattggaccaaataagacagatcaggcttgatgcttgtgaaactgaacattccctccctatatttacatgaaagctataaactgggtatatggcaaactcctatttatgatggaaaatcaatcttttgagaccataattatggactttagtaagctaaatgctccttttgaataatggagcatcatcattcatgggttatccatgtaattcgataactgtagatgtttggtaatttctaaagggaaaaagtcagttgtaagtgtaccagaaaaatgtttttgatgatttaaggctctgaatttcaataataacttcaaagctctttgctggatggaaatgcttggctggttttcagttacacttgctgatgaagaaaattatgtttgacatcacctattgacttgatttagagcagtgcataaggttgacatgatgaataatgtagtgatagttcccaaaacttggggctactgtacaactttcttctctatttatttcctgaatgtgaggatatgtcagacttaatttaagtgctgtatgttctcaagcataggagcctctaaaagaatcaataacaagaaaatttgcaaaactctgtgtggatacatatttcatccttcgtgttacaccattgacgaaatcaatatttgaggaagtaattctaatgtttgctgaggctcaccataattatcatactagctcataactgatggtattatcaagctatgatttcatcattggggtggaagtaattaatcccttttcaggtaaaatatctaggttacattcagcatactgaaatttaaaataattagctgataacatgggaaaaatatgcacaacagtacaataatagttaatggacatcttgtaagcatgtgaggctaatgaaataaaaagccttgtgtcttcataatcccttccgttgtaacaagcttctctgtgtgtgtgtgtgtgtgttctacagtcagcattttttcccttcaaatggtattcaaaaccaaattagatatgtgtgttgtaaacgtgtaatgtgacaatttacatatttaaatttagcagtcagtttctaccattttgctttgctgttccttttttcttttttctttttttgtcttttcagtggtttaacatatggttgacatcgtgtgtgctactatggtaatactgtcaagtactacctactacctgtatggctgtatctattgtgtaacattttaaaaatagataaatgtgcttaccaaaagactattgatttcaggtcactatgctgctccttaccatcatttttgctgtcgtccatagtggtatggcaagcttacgtgaaactggtgagaaaataataggggagagagcttaccgtgtaatgtttgctggaatctcactgcctttagcagttagtactgttgtaagtgcttggcatacctttttttggacagttggcatctcaatggctaagttcttctgtatcttagaacgttgtcctttcttgtaggtctactttataaatcatcggtatgatggcattcagctatggcaagttcagggtatttcaggcatccatgagcttgtttggctctcatctttcatctcattcttctttttgtatccatctactttcaatcttttagaagtggcagctgttgacaagccaaaattccacatgtgggaaactggaataatgcgcatcactagacatccacaggtaattccaggaggccattttaaagatacttgtcatggaattctttagtgatattagatataaacctatgttttttatctgttatctttccttgcatatgttttgactcataacatataatatggtttgctttatggtattctatagatggttggacaggtaatttggtgcttagcccacacgttatggattggcaattcagttgctgttgcggcatccgttggattaattggtcaccatctgtttggtgtttggaatggtgataggaggctggcatcacgctatggtgaagcctttgaagttctgaaaaagagaacaagtgttattccttttgctgcagttatcgatggaagacagaaactacccaaagattattacagggagttcatccggttaccatatctcgcaatcactgcattaactttgggagcatactttgttcatcccttaatgcaggcgtccagctaccaactcccttggtgattggtgtacataacaatgtccacaaagagaacacgatacagaaatagtgactttgtactttgatagacctgatagcctggccttgcattcgttattttaatactggcctgctcacacttgttgtaaaagaagactaacgaaagagtaccaggttgatgtagatgggagtattcaagacaaatggattgcacgttgccatgcttcctg</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0405200, RefSeq:Os12g0405200