BGIOSGA011571

From RiceWiki
Revision as of 09:33, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA011571| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA011571, complete gene.| tag = OsJ_091...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA011571

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA011571, complete gene.

LocusTag

OsJ_09180

Ensembl Transcript ID

BGIOSGA011571-TA

Ensembl Protein ID

BGIOSGA011571-PA

Length

1349

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:1184565..1185913

Sequence Coding Region

1185722..1185913,1185527..1185601),complement(1185364..1185438,1185158..1185238),complement(1184995..1185069
,1184705..1184878),complement(1184565..1184606

Genome Context

<gbrowseImage1> name=IndicaChromosome03:1184565..1185913 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:1184565..1185913 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGAGCACGTTAGATGCCACGCGAGCAGAGCTCGGCCTTGTTGTTCTGTACTTGAACAAAGCCGAGGCCAGGGACAAGATATGCAGGGCGATCCAATACGGCTCGAAGTTTATCAGTAACGGGCAGCCTGGCACGGCACAGGATGTTGACAGGTCCACCACCCTTGCTCGCAAAGTTTTCCGGCTTCTCAAGTGGGTCAATGATCTGCATGGTCTTATCAGCCCTCCTGCTAAGGGGACTCCTCTTACACTGGTCTTGCTTGGGAAGTCCAAAAATGCGCTGCTCTCGACTTTCTTGTTCCTGGACCAATTTGTATGGTTGGGAAGAACAGGGATATACAAGAACAAGGAGCGCACAGACCGGATTGTAAGGATATCCCTCTACTGCTGGATGGCCTCTTCAGTCTGTGCAGGGCTAGTTGAGCTTGGAGAGCTTAAGAGGCTATCAAAATCAATGAGGAAGCTGGCGAGAGAGCTGAGGGATACTGACAAATATGAGAATGACCAGTACAAGAGCAAGATGAAACAGTCGGATGAACGGCTGCTAGCACTGGTGAAGGCGGCCATGGATGTTGTGGTGGCCGTAGGGCTTCTTCAGCTGTCACCCAAGAAGATCACTCCAAGGGTAACAGGGGCATTTGGATTCGTCACCTCACTCATTTCCTGCTATCAGCAACTTCCATCTCGTGCTCCCGCTATCAAAGTGAAGGCATGA</cdnaseq>

Protein Sequence

<aaseq>MSTLDATRAELGLVVLYLNKAEARDKICRAIQYGSKFISNGQPGTAQDVDRSTTLARKVFRLLKWVNDLHGLISPPAKGTPLTLVLLGKSKNALLSTFLFLDQFVWLGRTGIYKNKERTDRIVRISLYCWMASSVCAGLVELGELKRLSKSMRKLARELRDTDKYENDQYKSKMKQSDERLLALVKAAMDVVVAVGLLQLSPKKITPRVTGAFGFVTSLISCYQQLPSRAPAIKVKA</aaseq>

Gene Sequence

<dnaseqindica>1..192#313..387#476..550#676..756#845..919#1036..1209#1308..1349#ATGAGCACGTTAGATGCCACGCGAGCAGAGCTCGGCCTTGTTGTTCTGTACTTGAACAAAGCCGAGGCCAGGGACAAGATATGCAGGGCGATCCAATACGGCTCGAAGTTTATCAGTAACGGGCAGCCTGGCACGGCACAGGATGTTGACAGGTCCACCACCCTTGCTCGCAAAGTTTTCCGGCTTCTCAAGGTCACTAACGATGATATCCTTCCTTGCTTGCTAGTACTAGTTGATACTTGTATCGAACAGCAGTTAACTCAGCGTCAGGCAACTTATGTTCTTTGAACTGTTTCTGTCTTGCATTTGCAGTGGGTCAATGATCTGCATGGTCTTATCAGCCCTCCTGCTAAGGGGACTCCTCTTACACTGGTCTTGCTTGGGAAGGTATTTCTTTTCTTTTACAAAAATTCGAACAAAGAATTATCTGCTTGAGAATGATGCGATTGTTAACCAAAGGCTTTTACAATTGCAGTCCAAAAATGCGCTGCTCTCGACTTTCTTGTTCCTGGACCAATTTGTATGGTTGGGAAGAACAGGGATATACAAGGTTGTCAAGATTGATACAGGGTTCAGCAGTTGTGTGTGTGTGTGTGTGTTTTTTTTTATTTTTGGCCTTGTGTTGATATACAAGATTGTCTAAATGATATATTTTTTTTCTGTTCTTGCTGCTAGAACAAGGAGCGCACAGACCGGATTGTAAGGATATCCCTCTACTGCTGGATGGCCTCTTCAGTCTGTGCAGGGCTAGTTGAGGTATAAATACTTCGGTAATTCACTGCAATTCTTTACCTCATTTTGATAGTCAATAAAAATCATTGAACATATATATACCATTTGGCAGCTTGGAGAGCTTAAGAGGCTATCAAAATCAATGAGGAAGCTGGCGAGAGAGCTGAGGGATACTGACAAATATGAGGTGTGCATTCTTTCATCATCTCTGCATCCCACTGGAAACTGATGACGATTGACGAGTACAAATTTTATAGAGCTTGTGCAATTAACCTTCTCGCTCTTTTTCTGCTTGGTTTGTAGAATGACCAGTACAAGAGCAAGATGAAACAGTCGGATGAACGGCTGCTAGCACTGGTGAAGGCGGCCATGGATGTTGTGGTGGCCGTAGGGCTTCTTCAGCTGTCACCCAAGAAGATCACTCCAAGGGTAACAGGGGCATTTGGATTCGTCACCTCACTCATTTCCTGCTATCAGGTACCCACTGAATCTGTTCATCCAGTCAATGTTCTTGGAGAATTTTAGTGAGACTAGCACTGGAATTTTGTACTCAACTGTCCCATTTTGCCATGCAGCAACTTCCATCTCGTGCTCCCGCTATCAAAGTGAAGGCATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA011571