BGIOSGA011578

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Revision as of 09:33, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA011578| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA011578, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA011578

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA011578, complete gene.

LocusTag

OSJNBA0090O10.21

Ensembl Transcript ID

BGIOSGA011578-TA

Ensembl Protein ID

BGIOSGA011578-PA

Length

4586

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:1077847..1082432

Sequence Coding Region

1082313..1082432,1081742..1082021),complement(1081304..1081671,1080532..1080658),complement(1079331..1080350
,1078474..1079168),complement(1077847..1078245

Genome Context

<gbrowseImage1> name=IndicaChromosome03:1077847..1082432 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:1077847..1082432 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGCCGGCCGAGCGTCACCGGCGGCGGCGGCGGAGGGCGCACACGGCGGACGAGGCGGCGGCGGTGCTGCGGAAGGCGTGGTGCCGGCTGCGGCTGTCGGCGCGGGATCCGTCGCGGGCTTCCAAGGAAGAGATCGCCGAATTGCTGCCCGAAGCAAGTGATTCTTCAGCAGATGACATCCCACTCAGCTCGGTGGTACGATTCATGGCGAACAAACACATACTGCTGCTTCACGCTGGGGGTGATAGCAAGAGGGTTCCATGGGCGAACCCCATGGGGAAGGCCTTCCTGCCTCTGCCTTACTTGGCCGGAGACAATCCTGATGGACCTGTTCCGCTGCTTTTCGACCACATTCTCGCGATCTCATCCAGCGCAAGGCAAGCTTTCAAAAACCAAGGTGGGATCTTCATAATGACCGGGGATGTTCTCCCGTGCTTCGATGCTTCAAACCTAGTTCTTCCTGATGATGCTGCTTGCATCGTCACCGTGCCAACAACTCTAGATGTGGCTGCTAATCATGGTGTAGTTGTAGCGGCAAAGGACGGAACTGATGGGGAGAACTATTCCCTGTGTTTGGTTGATAATCTCCTCCAGAAGCCTACAGTGCACGAGCTTGTGGAGGGCCAGGCTATTCGAGATGACGGGAGAGCACTGCTTGACACAGGGATAATATCAGCCAGGGGTAAAGCATGGCAGGAGCTTGTTAGACTTGCATATTCATCTAGCCATGTCATGATCAAGGAGCTCATAACTGGCAGAAAAGAGATGAGCTTATACGAAGATCTTGTTGCTGCATGGGTGCCTTCCAGGCATGAATGGTTAAGGACCCGTCCATTTGGCATGGAACTAATTGCTGCTTTGGGAAAGCACAGGATGTTCAGCTTTTGTTCATATGATTTCTCATTTTTACATTTTGGCACATCCGCTGAAGTTCTTGATCACTTGGCGGGCTCATATTCAGGACTTGTAGGGCGAAGGCACATGTCTTCGATACCAGAGACTACTGCTTGTGATATTGCGGCAACAGCTGTCATTTTGTCCAGTAAAATTTCTGCTGGGGTCTCAGTTGGAGAGGATTCATTGGTCTATGATTCATCACTTTCAGGTAGAATTAGGATTGGCTCACAATGTATTGTTGTTGGGGTGAATATACATGAGTTACATGGGAACAGGTCTCAGATAATCAGTACTAGCTCATACTTCACATTACCTGATCGACATTGCCTCTGGGAAGTCCCTTTGGTAAACTCTGTGGAAAGAGTAATGGTTTACTGTGGCCTTCATGATAATCCAAAAGTATCTATGAAGAAAGATGGGACATTCTGTGGCAAACCATGGAGAAATGTCTTGGAACATCTTAAAATCCAGGATACAGATCTGTGGAGCTCAACCAATGAAGACAACTGCTTATGGAATGCAAAGCTTTTTCCAGTCATGTCTCTACCTGAAACGCTGAAAGTAGGTATGTGGCTTATGGGATCGACATGTGACCTGGATGGCAAAGTCGCTTCCCTGTGGAAAGAATCACGGAGGATCAGCTTAGAAGAGCTGCATCGTTCGATTGACTACCATCAGCTCTGTGTGAATTCAAGCAAGCATCAAGCAGATCTAGCAACCAACATTGCTAAAGCTTGCATGACCTATGGCTTGCTTGGGCGCAACCTGTTTCAACTATGTGAGGAAATGCTACAAAAGGAAAATTCATGCGTAGAAGTCTGTAATGAGTTACTTTCGCTTTGTCCCAGTCATGGGGATCAGTATTCTGGTGTTCTTCCGCAGAGCAGAAGATATCAGGTCAAAATGGATCTGCTTACAGCTTCTGGAGATCTTTCCACTGCAGCTATTGTTGAAGATAAAGTGTGGGCTTCCATAGCAAGTGAAACTGCATCAGCGATAAAATATGGATCTAAAGAGCCATCAAGCGATTCCAAGTGTTCAAGTAATGGTAACCTGCATCCTAAGAAGGCTATGGTGGAATTACCGGTCCGTGTCGACTTTGTCGGGGGTTGGAGTGATACACCTCCATGGAGTTTGGAGCGTCCAGGTTGTGTTTTGAATATGGCAATACGGTTGGAAGGGAACCTTCCAGTTGGTGCTATGATAGAGACAACAATGGACCACCTTGGAGTTCTCATTGAAGATGATGCTGGCAGAAATGTTTGTATTGATGACCTGTCTTCTATTACTTCACCATTCAAAGAAAATGATTCATTCCGTTTAGTCAAGTCTGCTCTTATTGTGACTGGTGTCCTAAACCATGAAAGATTGTCAAAATTAGGGTTGAACATTAGGACATGGGCAAATGTTCCTCGTGGAAGTGGTCTGGGAACTTCTAGCATATTAGCAGCTGCGGTAGTTAAGGGGCTATTTCAACTTATAGAAGGTGATGAAAGTGATGCAACTGTTGCTAGAGCTGTGCTGGTAGTAGAGCAAGTAATGGGCACAGGCGGTGGATGGCAAGATCAAATTGGTGGCCTATATCCTGGAATCAAGTGCACTCAGAGTTTTCCAGGACAGCCATTGCGTTTGCATGTTGTTCCATTGCTGGCATCTCCGCAGTTGATTCAAGAATTACAACAACGTCTCCTGGTTGTGTTCACTGGTCAAGTAAGGCTTGCCCACCGGGTCCTGCAGAAAGTTGTCACTCGATATCTCCGCCGTGATAGCCTGTTGATATCTAGCATCAAGAGGCTTGCTGAGTTGGCGAAAATTGGAAGGGAAGCCCTGATGAATGGTGAAATAGACGAGCTTGGTGGCATAATGTCGGAGGCCTGGAGGCTGCATCAGGAGCTAGATCCTTTTTGCAGCAACAAGCTTGTGGACGAATTGTTTGCATTTGCTGACCCTTACTGCTGCGGCTACAAGCTTGTTGGAGCTGGTGGGGGCGGCTTTGCGTTGATGCTTGGAAAGAATCTTAACTCTGCCAAAGAACTCAGACAAGCACTCGAGAATTCTGCCACCTTCGATGTAAAGGTGTACAACTGGAACGTTGCTATGACACCATGA</cdnaseq>

Protein Sequence

<aaseq>MEPAERHRRRRRRAHTADEAAAVLRKAWCRLRLSARDPSRASKEEIAELLPEASDSSADDIPLSSVVRFMANKHILLLHAGGDSKRVPWANPMGKAFLPLPYLAGDNPDGPVPLLFDHILAISSSARQAFKNQGGIFIMTGDVLPCFDASNLVLPDDAACIVTVPTTLDVAANHGVVVAAKDGTDGENYSLCLVDNLLQKPTVHELVEGQAIRDDGRALLDTGIISARGKAWQELVRLAYSSSHVMIKELITGRKEMSLYEDLVAAWVPSRHEWLRTRPFGMELIAALGKHRMFSFCSYDFSFLHFGTSAEVLDHLAGSYSGLVGRRHMSSIPETTACDIAATAVILSSKISAGVSVGEDSLVYDSSLSGRIRIGSQCIVVGVNIHELHGNRSQIISTSSYFTLPDRHCLWEVPLVNSVERVMVYCGLHDNPKVSMKKDGTFCGKPWRNVLEHLKIQDTDLWSSTNEDNCLWNAKLFPVMSLPETLKVGMWLMGSTCDLDGKVASLWKESRRISLEELHRSIDYHQLCVNSSKHQADLATNIAKACMTYGLLGRNLFQLCEEMLQKENSCVEVCNELLSLCPSHGDQYSGVLPQSRRYQVKMDLLTASGDLSTAAIVEDKVWASIASETASAIKYGSKEPSSDSKCSSNGNLHPKKAMVELPVRVDFVGGWSDTPPWSLERPGCVLNMAIRLEGNLPVGAMIETTMDHLGVLIEDDAGRNVCIDDLSSITSPFKENDSFRLVKSALIVTGVLNHERLSKLGLNIRTWANVPRGSGLGTSSILAAAVVKGLFQLIEGDESDATVARAVLVVEQVMGTGGGWQDQIGGLYPGIKCTQSFPGQPLRLHVVPLLASPQLIQELQQRLLVVFTGQVRLAHRVLQKVVTRYLRRDSLLISSIKRLAELAKIGREALMNGEIDELGGIMSEAWRLHQELDPFCSNKLVDELFAFADPYCCGYKLVGAGGGGFALMLGKNLNSAKELRQALENSATFDVKVYNWNVAMTP</aaseq>

Gene Sequence

<dnaseqindica>1..120#412..691#762..1129#1775..1901#2083..3102#3265..3959#4188..4586#ATGGAGCCGGCCGAGCGTCACCGGCGGCGGCGGCGGAGGGCGCACACGGCGGACGAGGCGGCGGCGGTGCTGCGGAAGGCGTGGTGCCGGCTGCGGCTGTCGGCGCGGGATCCGTCGCGGGTGCCGCCGTGGGACGCCGTCGTCCTCACCGCGGCCAGCCCCGAGCAGGCCGCGCTCTACGACCGCCAGCTCGCGCGCGCCCGCCGCCTCGGCCGCTTCCCGGCCTCCACCGCCGCCCTCGCCCGTCCCCGACCCCGACGCCGCGCGCATCGGCTCCGGCGCCGCCACTCTCCACGCCGTCGCCTCCCTCGTCCGCCATCTCATCGCCCAGGTCCAGCCACTTCTGCCCTATGTACTACTCCTACTACAGAATCGATCCCCTCCCCTGTTTAACATCATCTGAATCTGCAGGCTTCCAAGGAAGAGATCGCCGAATTGCTGCCCGAAGCAAGTGATTCTTCAGCAGATGACATCCCACTCAGCTCGGTGGTACGATTCATGGCGAACAAACACATACTGCTGCTTCACGCTGGGGGTGATAGCAAGAGGGTTCCATGGGCGAACCCCATGGGGAAGGCCTTCCTGCCTCTGCCTTACTTGGCCGGAGACAATCCTGATGGACCTGTTCCGCTGCTTTTCGACCACATTCTCGCGATCTCATCCAGCGCAAGGCAAGCTTTCAAAAACCAAGGTTGTAGCTTATAGACAGAGCCACTGATTTTGAGCAATATGTTCAATTTTAATTGGTACAGTATGATCAGGTGGGATCTTCATAATGACCGGGGATGTTCTCCCGTGCTTCGATGCTTCAAACCTAGTTCTTCCTGATGATGCTGCTTGCATCGTCACCGTGCCAACAACTCTAGATGTGGCTGCTAATCATGGTGTAGTTGTAGCGGCAAAGGACGGAACTGATGGGGAGAACTATTCCCTGTGTTTGGTTGATAATCTCCTCCAGAAGCCTACAGTGCACGAGCTTGTGGAGGGCCAGGCTATTCGAGATGACGGGAGAGCACTGCTTGACACAGGGATAATATCAGCCAGGGGTAAAGCATGGCAGGAGCTTGTTAGACTTGCATATTCATCTAGCCATGTCATGATCAAGGAGCTCATAACTGGCAGAAAAGAGGTGAGCTAATATTTCCTAACACACTGTCCAATTTTTCACAACAGGCTCTCTCATTTACTGCAGACTTGCTTCATCGAATCAAGGCTATGTGATTATTCTGAAAATGCATGTGTTGCATTTGTAGTAGTTGGAGATATCGGTCTACTAATGAGCAACTTCCCTTAAAAGACATAATCACTCATTACTTCAGTTTGGGAGTTATAAATAAATTTGCTATAATTCTTGCAGTGCTGGATGCTCTTCTAGCTGTACAATACAATATTCTATCATCCTGAATTTTACGAAAGTTAGATGCTGTCTGTCTCTGTTTCGCTCTTTGCTTTGATATGCTAGAAGCAACAGTAGTCTGCTTTTCCATCCTAAAGAGAGGCATTGGCATTGTTAGGCTGCTTTATGTTTTATTTTATATTGAGACCAGATTTTCCTAACCTTTTTTCTTTGTCATGATAAAGCTCTGAATATTCCAAACCTCATTAATCTCATCTTTATGGAATTTTTTTTGTTAGACCAGAAATTCAAAGTGACGTCCTAAACTCATTTTCTTTTGCTCCATTGCTTCCATTAATTACGTTTATCATTTATCTAACTGTAGATTTGATATAATATATTTCATTTCGTGGGTTCATATTACCCGATCTATTGCAGATGAGCTTATACGAAGATCTTGTTGCTGCATGGGTGCCTTCCAGGCATGAATGGTTAAGGACCCGTCCATTTGGCATGGAACTAATTGCTGCTTTGGGAAAGCACAGGATGTTCAGCTTTTGTTCATGTATGTTCTCTTTATAATTCATTATGAGCAGTTGCAAGTAAATTATGCTGATTCTCTTTCTGGTATGGCTGTGCATTAAATTCTCCTGTATTTGACAAACAGTTCACATGTTATATTTCTGATTAGTTTTGTGTGATATTATGCCTTTTGCAAAGCTAAGTTGTGACCATTTTCTTTTCAGATGATTTCTCATTTTTACATTTTGGCACATCCGCTGAAGTTCTTGATCACTTGGCGGGCTCATATTCAGGACTTGTAGGGCGAAGGCACATGTCTTCGATACCAGAGACTACTGCTTGTGATATTGCGGCAACAGCTGTCATTTTGTCCAGTAAAATTTCTGCTGGGGTCTCAGTTGGAGAGGATTCATTGGTCTATGATTCATCACTTTCAGGTAGAATTAGGATTGGCTCACAATGTATTGTTGTTGGGGTGAATATACATGAGTTACATGGGAACAGGTCTCAGATAATCAGTACTAGCTCATACTTCACATTACCTGATCGACATTGCCTCTGGGAAGTCCCTTTGGTAAACTCTGTGGAAAGAGTAATGGTTTACTGTGGCCTTCATGATAATCCAAAAGTATCTATGAAGAAAGATGGGACATTCTGTGGCAAACCATGGAGAAATGTCTTGGAACATCTTAAAATCCAGGATACAGATCTGTGGAGCTCAACCAATGAAGACAACTGCTTATGGAATGCAAAGCTTTTTCCAGTCATGTCTCTACCTGAAACGCTGAAAGTAGGTATGTGGCTTATGGGATCGACATGTGACCTGGATGGCAAAGTCGCTTCCCTGTGGAAAGAATCACGGAGGATCAGCTTAGAAGAGCTGCATCGTTCGATTGACTACCATCAGCTCTGTGTGAATTCAAGCAAGCATCAAGCAGATCTAGCAACCAACATTGCTAAAGCTTGCATGACCTATGGCTTGCTTGGGCGCAACCTGTTTCAACTATGTGAGGAAATGCTACAAAAGGAAAATTCATGCGTAGAAGTCTGTAATGAGTTACTTTCGCTTTGTCCCAGTCATGGGGATCAGTATTCTGGTGTTCTTCCGCAGAGCAGAAGATATCAGGTCAAAATGGATCTGCTTACAGCTTCTGGAGATCTTTCCACTGCAGCTATTGTTGAAGATAAAGTGTGGGCTTCCATAGCAAGTGAAACTGCATCAGCGATAAAATATGGATCTAAAGGTACAGTCTGTACACTACCAACAAACTTAATGCTATTTTTTCTGTCGCTTTTCTCAAAATGCAGTTATGTCTTCCAGGCAACGAGCTAAATGTGGTTCATTTTACCATTATCAATATTGATGTTTATATCAATCTAGTTAACACATATGTATGATTTTGTAGAGCCATCAAGCGATTCCAAGTGTTCAAGTAATGGTAACCTGCATCCTAAGAAGGCTATGGTGGAATTACCGGTCCGTGTCGACTTTGTCGGGGGTTGGAGTGATACACCTCCATGGAGTTTGGAGCGTCCAGGTTGTGTTTTGAATATGGCAATACGGTTGGAAGGGAACCTTCCAGTTGGTGCTATGATAGAGACAACAATGGACCACCTTGGAGTTCTCATTGAAGATGATGCTGGCAGAAATGTTTGTATTGATGACCTGTCTTCTATTACTTCACCATTCAAAGAAAATGATTCATTCCGTTTAGTCAAGTCTGCTCTTATTGTGACTGGTGTCCTAAACCATGAAAGATTGTCAAAATTAGGGTTGAACATTAGGACATGGGCAAATGTTCCTCGTGGAAGTGGTCTGGGAACTTCTAGCATATTAGCAGCTGCGGTAGTTAAGGGGCTATTTCAACTTATAGAAGGTGATGAAAGTGATGCAACTGTTGCTAGAGCTGTGCTGGTAGTAGAGCAAGTAATGGGCACAGGCGGTGGATGGCAAGATCAAATTGGTGGCCTATATCCTGGAATCAAGTGCACTCAGAGTTTTCCAGGACAGCCATTGCGTTTGCATGTTGTTCCATTGCTGGCATCTCCGCAGTTGATTCAAGAATTACAACAACGTCTCCTGGTTGTGTTCACTGGTCAAGTAAGTATGAATTTTCTGCTGTAAGCATATATAACATAGTAGATAAACTGAAATTAGGGCTAGAAGTTTCAATTTACAAACAGTAGCCTGTTCAAGTTCCACCATGATTCTAAGATTTGTACGTCCAAACAAGATTCCTTCCAAGTGTGCACGCCCATCCATTTTCCACATTGATTTTGCTTCAAAAGAGTATAATTTTCTCCCCAAATGAATGTATACTCTGCACAGGTAAGGCTTGCCCACCGGGTCCTGCAGAAAGTTGTCACTCGATATCTCCGCCGTGATAGCCTGTTGATATCTAGCATCAAGAGGCTTGCTGAGTTGGCGAAAATTGGAAGGGAAGCCCTGATGAATGGTGAAATAGACGAGCTTGGTGGCATAATGTCGGAGGCCTGGAGGCTGCATCAGGAGCTAGATCCTTTTTGCAGCAACAAGCTTGTGGACGAATTGTTTGCATTTGCTGACCCTTACTGCTGCGGCTACAAGCTTGTTGGAGCTGGTGGGGGCGGCTTTGCGTTGATGCTTGGAAAGAATCTTAACTCTGCCAAAGAACTCAGACAAGCACTCGAGAATTCTGCCACCTTCGATGTAAAGGTGTACAACTGGAACGTTGCTATGACACCATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA011578