BGIOSGA011593

From RiceWiki
Revision as of 09:34, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA011593| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA011593, complete gene.| tag = OS03G01...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA011593

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA011593, complete gene.

LocusTag

OS03G0111100

Ensembl Transcript ID

BGIOSGA011593-TA

Ensembl Protein ID

BGIOSGA011593-PA

Length

4465

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:876524..880988

Sequence Coding Region

880940..880988,880712..880839),complement(880536..880601,880159..880268),complement(879812..879872
,879547..879630),complement(879108..879164,878677..878737),complement(878548..878594
,878314..878391),complement(878041..878205,877676..877927),complement(877481..877559
,877118..877273),complement(876886..876995,876524..876583

Genome Context

<gbrowseImage1> name=IndicaChromosome03:876524..880988 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:876524..880988 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCCTCCTCCTCCGTCTCCGCCGCCGCCGCCGCCGCCGCGCAGGCAGGTGGTGCTGTGGCGGCAGCGGAGTACGAGGACGTGATGGGGCGGCTCTCCTCGCTCATCACGCAGAAGGTGCGGGCGCACAGCGGCAACCGGGGAAACCAGTGGGACCTCATGGCGCATTACCTCCAGATTCTGGAGCTGGAGGAGCCGATCGCGCGGATGAAGGTGATTCACGTTGCCGGGACCAAAGGAAAGGGTTCAACATGCACATTCACAGAGGCAATCCTGCGATCATGTGGTTTCAGCACAGGGCTGTTCACCTCACCACATTTGATGGATGTCAGGGAGCGATTCCGGCTAAATGGGGTGGATATTTCCGAAGAAAAGTTTTTGAAATACTTCTGGTGGTGCTGGAATAAGCTCAAGGAGAAGACTGATGATGATATTCCCATGCCAACCTACTTCAGATTCCTTGCATTGTTAGCATTCAAGATATTCTCAGCTGAACAGGTTGATGTTGCTGTTCTCGAGGTTGGCCTTGGAGGGAAGTTTGATGCAACTAATGTGGTTGAAGCACCTGTGGTTTGTGGAATAGCTTCCCTTGGATACGACCATATGGAAATTCTTGGAAACACACTTGGAGAAATTGCTGGTGAGAAGGCAGGGATTTTCAAGAAGGGAGTTCCGGCCTACACTGCTCCACAGCCAGAAGAGGCAATGATTGCTCTGAAACAAAGGGCTTCAGAATTGGGTGTTTCACTCCAAGTTGCACATCCTTTGGAACCCCATCAATTAAAGGATCAACATCTTGGACTGCGTGGTGAACACCAATATGTAAATGCTGGCCTTGCAGTTGCATTGGCTAGTACATGGCTTGAGAAGCAAGGACATGTGGAAAGAATACCACTGAACCGAACTGACCCGTTACCAGATCAGTTTATTAGTGGGCTGTCAAATGCCTCTTTGCAAGGCCGAGCGCAGATCATTACAGATTCACAAGTAAACTCAGGAGAGGAAGATAAAGACTGTTCTTTGGTTTTCTATTTGGATGGGGCTCACAGTCCTGAAAGTATGGAAATTTGTGCTAGATGGTTTAGACATGTCACTAAGGAGGATAGGACAGTACCATCTTCCATGGTGCAGTCTCAGTCTTGTGGCAACTCTCAAAAGATTCTTCTATTCAATTGCATGTCCGTGAGGGATCCTATGAGGTTGCTTCCGCATCTTCTGGATACATCAACTCAAAATGGGGTCCACTTTGACATGGCTCTTTTTGTGCCAAACCAATCACAATACAACAAGCTTGGTACCAATTCATCAGCTCCTGCAGAGCCTGAGCAAATTGATTTGTCATGGCAATTGTCGCTTCAAAGAGTGTGGCAGAAATTACTTCATGGTGATAAAGGTATGAACAACACAAATTCCAGTGAGAACAGTCTGGTTTTTGAATCACTTCCACTGGCAATGGAGTGGCTGAGGACAAATGCCCGACAAAACCGATCAACTTCTTTTCAGGTCCTGGTTACTGGCTCCCTGCATCTCGTTGGTGATGTGTTGAGATTGGTCAAGAAATGA</cdnaseq>

Protein Sequence

<aaseq>MASSSVSAAAAAAAQAGGAVAAAEYEDVMGRLSSLITQKVRAHSGNRGNQWDLMAHYLQILELEEPIARMKVIHVAGTKGKGSTCTFTEAILRSCGFSTGLFTSPHLMDVRERFRLNGVDISEEKFLKYFWWCWNKLKEKTDDDIPMPTYFRFLALLAFKIFSAEQVDVAVLEVGLGGKFDATNVVEAPVVCGIASLGYDHMEILGNTLGEIAGEKAGIFKKGVPAYTAPQPEEAMIALKQRASELGVSLQVAHPLEPHQLKDQHLGLRGEHQYVNAGLAVALASTWLEKQGHVERIPLNRTDPLPDQFISGLSNASLQGRAQIITDSQVNSGEEDKDCSLVFYLDGAHSPESMEICARWFRHVTKEDRTVPSSMVQSQSCGNSQKILLFNCMSVRDPMRLLPHLLDTSTQNGVHFDMALFVPNQSQYNKLGTNSSAPAEPEQIDLSWQLSLQRVWQKLLHGDKGMNNTNSSENSLVFESLPLAMEWLRTNARQNRSTSFQVLVTGSLHLVGDVLRLVKK</aaseq>

Gene Sequence

<dnaseqindica>1..49#150..277#388..453#721..830#1117..1177#1359..1442#1825..1881#2252..2312#2395..2441#2598..2675#2784..2948#3062..3313#3430..3508#3716..3871#3994..4103#4406..4465#ATGGCCTCCTCCTCCGTCTCCGCCGCCGCCGCCGCCGCCGCGCAGGCAGGTAAGCAACGCCACGCCCTGATTTTGTGCTGCTGCTGCTGCTTCGATTGATGGGGTTGGCTGGTGGTGGATACTGGATTGAGTCGATTCGTGGGGCGTAGGTGGTGCTGTGGCGGCAGCGGAGTACGAGGACGTGATGGGGCGGCTCTCCTCGCTCATCACGCAGAAGGTGCGGGCGCACAGCGGCAACCGGGGAAACCAGTGGGACCTCATGGCGCATTACCTCCAGGTCCATTTCCTCCTCCACTCCCCACTTGTCAAAATAGTATATTAGGATGGCTCATGGCTGGTTGTTTGATTTGATCGGGTGGATTTTGTTGCTTGCCGCGGTTCGCGCAGATTCTGGAGCTGGAGGAGCCGATCGCGCGGATGAAGGTGATTCACGTTGCCGGGACCAAAGGAAAGGTACTAACTCACTGATGATCAGCTCTAGCTAGAAAGCTGGATGTTGTGTGGTTTCCGTTTGGGTGAAGAGTGTTTAGAGAGTAGCGATGCAAGGTGCATAAATCACTAATGGAACATGTCTACGCAGAATCTTAATGCAACCAATCTGCACATTAATGTTTACCTATGCAATAGTTTACTTCTGTTTGGTAATGAAACCAATTAATGTATAATAGCTTATCTTCCTTATGACGTGGAGTTTGAACAACACATGGGCTTTATCTACAGGGTTCAACATGCACATTCACAGAGGCAATCCTGCGATCATGTGGTTTCAGCACAGGGCTGTTCACCTCACCACATTTGATGGATGTCAGGGAGCGATTCCGGCTAAATGGGTAAAATTCCTTTTCATTTTTCTCCTTTACTTATCGTTGACTCTAATGTTGAATTGCTAATGCTTCTCATTTCGATACTTTAGAATAAGCTTCTGGACACACATGTTCTATACCATATCTTTTATGTTATTTGGATAACTATATATTCTGCATTGTACTTAAAATTCCGGCAAATAATTGAATGGACTTGATTTTGCGTGCATCATATCCACCATGTCTTTTATGTTATTTGGATAACTATGTATTTTACTTGTTCTGATCTAGCTCCTAATTGTGAGAGCATCAGGGTGGATATTTCCGAAGAAAAGTTTTTGAAATACTTCTGGTGGTGCTGGAATAAGCTCAAGGTATATGTCTATCTCTATCTCTGTTGTTTCATATGATGGCACTCTGTGCTGGGCGCTAGCACTGATGAAAAACAACGACGAAATAAATGATACCAGGAACCTGTGCATTTCCTCTTTGTGTTTTTCTGCTGCTTTCGTTATCAAAACTTCTAGATGATGATGTACATGGGTGTACTTTCAGGAGAAGACTGATGATGATATTCCCATGCCAACCTACTTCAGATTCCTTGCATTGTTAGCATTCAAGATATTCTCAGCTGAACAGGTGAGATGTTTCTGGGTTGGCTGCTAGGATGCCTCGCAACAACCATGCTTGTTGTAAAATGTAACATCTTCTCCCAATCTTAATAAAATTCGGCCGGGTCACTTCTTCGCTTCCTGCCTGGCAAAAAAGATATAACAGCAGACACTTCCTGCTTTTTAAATTTTTGTTTTACTGCTTGCATCTGTTTGTACACATAACTTGTTCCTCCATTTTACTTGAATGACATTGTAACTTTATAGGGCTTTAATGTACTAAGGTAGTCGCACCAAAGACTTACATCACATATTTCCTTTTTTGAGACTTGGAATGTAGTGGAACCATTTATGATTTTCTGGGTAAACATTATTTGATGTTTTACTCCCTCTTTTCGTGGGTCAAACAGGTTGATGTTGCTGTTCTCGAGGTTGGCCTTGGAGGGAAGTTTGATGCAACTAATGTGGTATGTTCTGTTCTGTTGGGTGCAAGTGTTAGTTTCTTTGTAATCGAAATCCAAGACAAACTTGAACTATATGAAAATCTTGTTTGCCCTAGGCTGTTTGCTTCTTCTTTCTTTTCTTTGCGGCCGTCCTTTCATCCCATACAAAAGGTGTGATCACAAAGCAAACTGTACTAGTAGTGTACTAGATATAGTCATTCGGGTCTAACCATATGCTGATGTCTTCTATTTTAATCAGAGTTACAGTTTAGCTTTTGTTTCTTCTGAACATTAATGAATTCATTCAGATCAAGTACTGCATCCTGACGACTCAAGGCATAAATAATTCAAAATAATAAATGCGTAACAGGTGTATAACTTTGCACATATGCAGGTTGAAGCACCTGTGGTTTGTGGAATAGCTTCCCTTGGATACGACCATATGGAAATTCTTGGTTAGTCATGAAACTGACAGTTGATGCCCCTCTATTACTAGGAAAAGTAGTTTCATGCTTTTGCCATGTGCCCTGTGAGCAGGAAACACACTTGGAGAAATTGCTGGTGAGAAGGCAGGGATTTTCAAGGTCATTTTAACTACTACCCTAACAAAGTCATGCTACAAATTAGGATGAACTGTTATATTATCACTTTTTTCACTTGGACTGTTGCCGATTAAAAGAGAATACGTAGCCAACATTTCTTGATTTTGTTGATTTGCTTGTGGCGTCTGATATCAACAGAAGGGAGTTCCGGCCTACACTGCTCCACAGCCAGAAGAGGCAATGATTGCTCTGAAACAAAGGGCTTCAGAATTGGGTGTATGTTTTATTTTAAACTTGTCCCTTATGTTTTGTAATATTTGTAAACTTGATAGTTAATACAGCTGAAAGCATCTTCTAAAATAAGCTAGTCTGTGCCTTCTGAAGGTTTCACTCCAAGTTGCACATCCTTTGGAACCCCATCAATTAAAGGATCAACATCTTGGACTGCGTGGTGAACACCAATATGTAAATGCTGGCCTTGCAGTTGCATTGGCTAGTACATGGCTTGAGAAGCAAGGACATGTGGAAAGAATACCACTGAACCGAACTGTAAGTCTCAATCAATAATTGTTGCTTACAAAAGTTGGTATGATAATTTCTTTCTGCTCTTATGGAATTTAGGACCCGTTATGATAATTTCTTTCTGCTTTTATGGAATTTAGGACCCGTTACCAGATCAGTTTATTAGTGGGCTGTCAAATGCCTCTTTGCAAGGCCGAGCGCAGATCATTACAGATTCACAAGTAAACTCAGGAGAGGAAGATAAAGACTGTTCTTTGGTTTTCTATTTGGATGGGGCTCACAGTCCTGAAAGTATGGAAATTTGTGCTAGATGGTTTAGACATGTCACTAAGGAGGATAGGACAGTACCATCTTCCATGGTGCAGTCTCAGTCTTGTGGCAACTCTCAAAAGGCATGCCTCACAGTTTCTCTAGTTTCATCTTACTTGAATGGACTTGATTTTGCATGCATCATATCATTGAATCTCCTTTCCCCTTATATGAAAATTTACCTTTGGACCAATCACAGATTCTTCTATTCAATTGCATGTCCGTGAGGGATCCTATGAGGTTGCTTCCGCATCTTCTGGATACATCAACTCAAAATGGTAGGTAAAAATTGCTTGAATGGAAAAATGAAGTCCATATTCACTCATCTATCTAATACTCCCACTTTATAATGTGTACTGGTTGTTTCCACTAACAACTTGAGTTCTGCACAAACTTATTTGTTCACTGTTGATTTCACTTTCAAGTTTAATTTGTTCCTGTTCTTGGTTGAATGTTTGCATTTATTGTTGTTTCATTTTTCCCAGGGGTCCACTTTGACATGGCTCTTTTTGTGCCAAACCAATCACAATACAACAAGCTTGGTACCAATTCATCAGCTCCTGCAGAGCCTGAGCAAATTGATTTGTCATGGCAATTGTCGCTTCAAAGAGTGTGGCAGAAATTACTTCATGGTGATAAAGGTTCTTCTTAACTTGATTACCAATAGACATTCATGTTTCTATTGGTCATATGCAGTTTTCTTGTTGAAACAAGTTACTTTTAGCCTGAAGATGATATCTGAATTTAGAAGCAAACGGTGCAGGTATGAACAACACAAATTCCAGTGAGAACAGTCTGGTTTTTGAATCACTTCCACTGGCAATGGAGTGGCTGAGGACAAATGCCCGACAAAACCGATCAACTTCTTTTCAGGTAGGTGCTTCCATCAAACTATAACCTATAACTTCAGAAATGTTTTCCTTTTTTAAATGCTAGTGTTTCATCCTAATATGTATTCCTGCATTTATAACTAGAGTGCTGTGCTATAGATGGTTACTTTATGTTCACCATCACTGTCCTGTAATCTGTGATATTTTTAGTTTTGGCATGTGATCATGTTTATTGAATTTCCTATTTTGCATAAATTCGATTTTTTGGAAACATCGTAACATGTGCGTGCGCAAGCTACTTCCGCACTTGGCGCTGATCCATTTGTGTCTGATACACTGAATTAGGTCCTGGTTACTGGCTCCCTGCATCTCGTTGGTGATGTGTTGAGATTGGTCAAGAAATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA011593