BGIOSGA011611

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Revision as of 09:34, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA011611| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA011611, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA011611

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA011611, complete gene.

LocusTag

OSJNBA0009C08.14

Ensembl Transcript ID

BGIOSGA011611-TA

Ensembl Protein ID

BGIOSGA011611-PA

Length

4213

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:610689..614901

Sequence Coding Region

614803..614901,614050..614138),complement(613774..613948,613476..613652),complement(613241..613372
,612897..612995),complement(612233..612349,611862..611957),complement(611446..611558
,610689..610809

Genome Context

<gbrowseImage1> name=IndicaChromosome03:610689..614901 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:610689..614901 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGCTCCACCTCACCTCCCGCGGCGCCCTCCCGCTGTCTCCGCCGCTCGCCGGCCAGCGGCGTCCTCACCTCTCTCTCTCCACGCCGTCGCTTCCGATCAAGAATCACACTTATTCAGTGCCACCTCCTTTCTCCAAGGCTCACTGCGCGATAGGATGCCAAGCTTCTCTAGCAACTAACTACATGGAAACCTCTGCGGTGGCTGATTTGGACTGGGAGAACCTCGGTTTTGGCCTTGTCCAGACAGATTTTATGTATATTGCAAAATGCGGGCCAGATGGGAACTTTTCCAAAGGAGAAATGGTACCATTTGGACCTATAGAACTGAGCCCATCTGCTGGAGTCTTAAATTATGGACAGGGCTTGTTTGAGGGCTTAAAGGCATATAGAAAAACAGATGGATACATTCTGCTGTTTCGTCCGGAGGAGAATGCCATAAGGATGAGAAATGGTGCAGAGAGGATGTGTATGCCTGCACCAACTCTTGAACAATTTGTGGATGCAGTAAAGCAAACCGTTTTGGCAAATAAAAGATGGGTGCCCCCAACCGGTAAAGGCTCCCTGTATATAAGGCCGCTGCTTATGGGAAGTGGAGCTGTCCTTGGTCTTGCACCTGCTCCTGAGTATACCTTTATGATTTTTGTCTCCCCTGTTGGGAACTATTTCAAGGAAGGTTTAGCCCCTATTAACTTGATTATAGAAGAAAACTTTCACCGTGCTGCCCCTGGTGGAACTGGCGGAGTGAAAACCATTGGAAACTATGCCTCGGTATTAAAAGCACAGAGGATTGCAAAACAGAAAGGATATTCAGATGTCCTCTATCTAGATGCCGTTCACAAGAAATATCTGGAAGAAGTGTCTTCGTGCAATATCTTTATTGTGAAAGGCAATGTTATTTCTACTCCAGCAATAAAAGGAACCATACTGCCTGGTATAACAAGGAAAAGTATTCTTGAAGTTGCTCAGAGAAAAGGCTTCATGGTTGAGGAGCGCCTTGTGTCAGTGGATGAGCTTCTTGAAGCTGATGAAGTTTTCTGCACGGGAACAGCTGTTGTGGTGTCCCCTGTGGGGAGCATAACTTATCTGGGGCAAAGGGTGGAATATGGCAACCAAGGAGTGGGCGTGGTGTGTCAGCAGCTGTATACTTCACTTACAAGCCTCCAGATGGGTCATGTGGACGATTGTATGGGCTGGACTGTGGAACTAAACCAGTGA</cdnaseq>

Protein Sequence

<aaseq>MELHLTSRGALPLSPPLAGQRRPHLSLSTPSLPIKNHTYSVPPPFSKAHCAIGCQASLATNYMETSAVADLDWENLGFGLVQTDFMYIAKCGPDGNFSKGEMVPFGPIELSPSAGVLNYGQGLFEGLKAYRKTDGYILLFRPEENAIRMRNGAERMCMPAPTLEQFVDAVKQTVLANKRWVPPTGKGSLYIRPLLMGSGAVLGLAPAPEYTFMIFVSPVGNYFKEGLAPINLIIEENFHRAAPGGTGGVKTIGNYASVLKAQRIAKQKGYSDVLYLDAVHKKYLEEVSSCNIFIVKGNVISTPAIKGTILPGITRKSILEVAQRKGFMVEERLVSVDELLEADEVFCTGTAVVVSPVGSITYLGQRVEYGNQGVGVVCQQLYTSLTSLQMGHVDDCMGWTVELNQ</aaseq>

Gene Sequence

<dnaseqindica>1..99#764..852#954..1128#1250..1426#1530..1661#1907..2005#2553..2669#2945..3040#3344..3456#4093..4213#ATGGAGCTCCACCTCACCTCCCGCGGCGCCCTCCCGCTGTCTCCGCCGCTCGCCGGCCAGCGGCGTCCTCACCTCTCTCTCTCCACGCCGTCGCTTCCGGTACTCTCTTCTCAATCTCAAACTCGCCTCCCTCCCCACCTATTTTTCTCGTCTTCGCTTTGCAATACCATGCGTTTCTACTACTTGCTGCCTGCCTGCGTGAGTGGATACTTTTGAACTAGAATGGGGAGCGAACCTTTTCTTCTTTTTCTCCCTCTTTTTTTTTAAACAGTGAATCTCCTAACTAGTAGTTGCCCAGCGATTCGAGCGTCTAATCATACATGAAGGGATTAAGACGTGGCGTTTAGCTCTAATTGTTGGTTACTTGTAAAGGTTTAGGCTAAATGACCATTACGATAACAAAGCTGTTCGTTTTCCCTATTTTCCTTGTTCTGGACTGTCATCATCTGAATTCCTAAATAAATGAATCAGGCACAACTAAGTTGTCTACTGTATCATTCATTGGCGTGTGGTAGTGGCTACTCTAGACTCTAGTGCTGTAGAGTAGATGCCATCTCTCTGGTCCTTTTGAGTGAAATTTGTGCTTGATTGGCCCTACTGGTCCCATCCCATGCATAGATTCAAGCCTCGTCTGATTTATTGTCATATTGTATTTCCTACTACTAGCAAAGATGCATCCGGGTTTAAATATTTTCAACTTTCGATGGCCTTTTGATCTGATAGAAGAATATCTTTTTTCCCCCACCTCTTCTTGCTACTGCAGATCAAGAATCACACTTATTCAGTGCCACCTCCTTTCTCCAAGGCTCACTGCGCGATAGGATGCCAAGCTTCTCTAGCAACTAACTACATGTATGTAAATATGAACTGTATATGACAAGTCTCACTGCCATGGGTTACGTTTCAATCAAGTCCACAAGTGATAAATATTGTCCTGATCGTATAACTTGCAGGGAAACCTCTGCGGTGGCTGATTTGGACTGGGAGAACCTCGGTTTTGGCCTTGTCCAGACAGATTTTATGTATATTGCAAAATGCGGGCCAGATGGGAACTTTTCCAAAGGAGAAATGGTACCATTTGGACCTATAGAACTGAGCCCATCTGCTGGAGTCTTAAATTATGGACAGGTTAGTAGGGAGTTTCTACAGTGGATTGGGAACTTCAAACATTGGTAACATGTGAAATAGGTACTCTTTGAAGTCCTAAATGAATTTACTGCGCTTAAACAGTGATTATTTTCGTACATAGGGCTTGTTTGAGGGCTTAAAGGCATATAGAAAAACAGATGGATACATTCTGCTGTTTCGTCCGGAGGAGAATGCCATAAGGATGAGAAATGGTGCAGAGAGGATGTGTATGCCTGCACCAACTCTTGAACAATTTGTGGATGCAGTAAAGCAAACCGTTTTGGCAAATAAAAGATGGGTAAGAAATTTTATGTTTTCCTATGCTCTTGGATTAAGTTCTGCATTCAACAATCTTTTGTCTTCATAATCCTGTCACTCTCTTTAATGTACTATATTTGTAGGTGCCCCCAACCGGTAAAGGCTCCCTGTATATAAGGCCGCTGCTTATGGGAAGTGGAGCTGTCCTTGGTCTTGCACCTGCTCCTGAGTATACCTTTATGATTTTTGTCTCCCCTGTTGGGAACTATTTCAAGGTTTGTGTTAAGTTTTAACTTAACTTCCACCAGATACTCGAGCAACTCATCCAATATGTAAAGAACCATGTATCCTAGGGAAATAATATTCCTTTTGCAGTGATTATAGGATAGTGGAATTGGAATTACACCACAAGCAGATTTGCTATCACGATTCCTGATTCCACCAAGAATAGAAATTCATCCCCTGTTATCTTTGTAAACTACCATACATGCTGATTAAATTTGTTATCTTTGATTTACAGGAAGGTTTAGCCCCTATTAACTTGATTATAGAAGAAAACTTTCACCGTGCTGCCCCTGGTGGAACTGGCGGAGTGAAAACCATTGGAAACTATGCCTCGGTAACTTCTGGCACTGCATCTATGAAAGCTACAACTATTTAATTTACAGCTTCTGTGGCCATCATCTAGTTAGTTATATTTGCAACTATGTACTTACCTATTGGCTATTGCTTATTCTGCTATATGTACAGCATGTAACTATGTACCCTCTAAATTCTATTGCTTACGCAGTTAGGCTTCTCTATTGTTTCAAGAGTAATTGAATTCGAAACTTAAAATGTAAACATTTTTGTTCCTATGAAGCTATTATGTTGGATATCTATGTGGATTTCATATTATTTAGTTTCAAATGGTCAGCTCACGGCTTATTTTTTTTTTCTCCCCTTGAGACAAATAACCGGAAATGGAAATCTCACTCGTTGTGATTTGTGAGGAAGTGATGTTGTGGTAAAATTAGCCTGAAATGGAAGTTAGAGTCAGTCAGTGATGATTTGTTTACTGAATACTGATATTCTAGCATATATACATACATTATGTGCTATTACTCACACTGTTTTAGTTTTAATCTTATGGTTTCTCAGTTTCCATATTTGTTGCCACCATGTAGGTATTAAAAGCACAGAGGATTGCAAAACAGAAAGGATATTCAGATGTCCTCTATCTAGATGCCGTTCACAAGAAATATCTGGAAGAAGTGTCTTCGTGCAATATCTTTATTGTGAAAGTATGATCCTTCTCTTATACCTATGCTTATTTTAGCAAATATTTTCAGTAGCTGTAGTCAGAAGTAGTTTTTCCTCAGCGAAGCGCATGATGTTATACTACTTAGTCAATTACAACCTAATCGATATTTTTTTGTTGTTGCATGATTAGGCGTTCCCATTTGGCCAATGCTTATTTAGGTTTTATGCAGTGAAATGGCACAAGTTCCCTTAGGATGTGTAAATCGTTTAGGTTCTTTTTTTTTATCGTCGTAATCATGTTATTTTCCCGCATCAGGGCAATGTTATTTCTACTCCAGCAATAAAAGGAACCATACTGCCTGGTATAACAAGGAAAAGTATTCTTGAAGTTGCTCAGAGAAAAGGCTTCATGGTAAATTACTCATCAGCATCATGGAGACCAGGAAAGAAATGACTGCCTAGTGCATTTTACCTGTGAATTTGAGATAAGCTTTTTATAGTTACCATTCCACAATACCAAATTAAATTCTTGTTTTCACCAGTAGCTCAAGTTTACTTAAATGATTAGCCAGATCCTATTTTCCTAGTGGCCTGGAAGAGCTGTTGTTGGCCCATCATAGGGTTATTTCCTCATTGATTACAGGAAGAAAAAATATGTTATTTAAATGCTTTTGTTAATGTTATGTAGCTTTAATTAATGTTAACTTACTGTAAGGTTGAGGAGCGCCTTGTGTCAGTGGATGAGCTTCTTGAAGCTGATGAAGTTTTCTGCACGGGAACAGCTGTTGTGGTGTCCCCTGTGGGGAGCATAACTTATCTGGGGCAAAGGTGAAACTTCTGCTTTGCTTGAAAGCTTACTTGCTGTGCAATATGGCTATTTGATGCAGTAAAAATTTGCAGCTAATGTCTTTAGAACACATATCACAGCAGTTTCGGGATAAGACTGGATTAGTTAGTTACTACTCTACTAGAAATAGCACCAAAACAAATGGTACTACCTCGGTAAAAATAAAACCTGGTGAAGAAGACCTTGGATTAGCTACGTGTTTCATAGGCTAGGTTTTCCTTAACTTTTCACCATGCTGATATGATTTTCTCACTTGTGATCATTTCTTAGGGGTTTTTTTTGTAATTATTACCTCAACATTTACCTGGCATGATCATGTCATCCTGTTACAAACACCACCAATTGCTTTACCAGCGTTTGGTCTGAGAGTCAACATTTTCTCTGTTTTTAGAAAAGCCGAAATGCAACATGATATGGAATGTAGTATTACACGCGCAGGTGGTCAGTTAGCTATAAACTTGAGATCTTTCGGGATTGGTTGCCCATGATAATTGTAGAGCAATTGGAGTCGTGCTGCCGCACGCATTAAAATGAGATATTTAACTATGCTAAGTTTGTTCTTGAGATAGTTATGACAAGACATATAAGATCCGAAAATTGTACTGCTAACCTTGCAGGGTGGAATATGGCAACCAAGGAGTGGGCGTGGTGTGTCAGCAGCTGTATACTTCACTTACAAGCCTCCAGATGGGTCATGTGGACGATTGTATGGGCTGGACTGTGGAACTAAACCAGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA011611