BGIOSGA011613

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Revision as of 09:34, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA011613| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA011613, complete gene.| tag = OS03G01...")
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Gene Name

BGIOSGA011613

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA011613, complete gene.

LocusTag

OS03G0106200

Ensembl Transcript ID

BGIOSGA011613-TA

Ensembl Protein ID

BGIOSGA011613-PA

Length

4165

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:597394..601558

Sequence Coding Region

601408..601558,600825..600886),complement(598558..600085,598376..598479),complement(598044..598293
,597394..597938

Genome Context

<gbrowseImage1> name=IndicaChromosome03:597394..601558 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:597394..601558 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGGAAGAGAAGTCAAAGACTGGCTAGGCGTCAGGAGAACATAGGCTGCATGTGGGGCCTCATCGGCATGCTCTATTTCCGACGTGACGCTAAGTTTCTGTTGGACAGGAAGCAAGGAAGCAGAAGGCACACTTTCGGTGGGCTTTCAGGTAGGAGGCACTCAAGAAAGAAATCCAGGGACTTTGAAGAAACAGATGAATATGGGGAGGATAACATAGAGGAATGCGACACAAGGAAACAAACCGTCAAAAGACTCATGGAGGACGAGCTGGGTAAGGTAAAACAGGTGAAAAAGATTCCCAAGGAAGAGGTTCAAAGAATATTAGCTGACCTGGGACATGATGTCTGTCTGGAAAAAAGTTCAATGCAGAGCACCAAACAAAACAGAGCCAAAAGTCACAGCACAAGCACAGCCATGGCTTCTCCATCTGGTTTGCTGGATCCAAGTGGTTCCAAATCCATGAAACAGGCAGAAGAAGATGATCTTGAACTTTCTTTAGCAGATTTTGTGGGAGAACTCTATGGGTACCATGATGATTACAAAAATAAGAGTGAACTGTGTCCAGAATTGAAGTCACATATCCATACAAAGCTTAGTGAGTTGAAGAGTGTGCCCTGTCAACGTGCTTATGAGGAATCTCCAGACTGGGGGCAAAGGGAGCATTTCTATGAAAAATATATTTGTAACAGCAGATCTTATCAATCTAACAAACTAGTAGATGCACCAGATATGCTAAGCCCAGAGAAGGAACTTTTCTTGAAGACACTTCAGAAACCGAGTCCGCATACTTTGGAGAAGGAGAACACCCAAAATAATCAAAACAGACAGGTAGTGACCAAGTTAGAGCCAAGGAAAATTCTTGAAAAAGGTGAAAATACTAAGAATTCAAAACAGCACGAGGTAGCCATCAAAACACATAGTAAAGAGGGCAGGAATATCTTTTTCTGGAGGAAAGATAAATCAATTATGAAGGGTACATCAGAAGGAACTAATAGTAGTAAGATGGTTAACAAAATAGTTATACTAAAGCCAAATCCAAGAGGGATCGATACTACTGTAGCTACAGCCTCTACATGTTTAGATCAGCAATCATGCACAATTCAATCTCCAAAATACCCTGCAACAGAGAGTTCTAAATTTTCAATTAAGGAAGTCAGGAGGAGATTCAAAATTGTGACTGGTGATACTAGAAGAGGAAGACCATCAGTGTATGAAGATGATTTACAAAGAGATTCACAAAGGATCAATGATTCAGTCTTTAAAGTCAGAAAGGATTCTAAACAGTCAGATAAGGACAATTTGAGACCTTTGACCAGTGGTAAGCAAAAGCAAAGGAATGATGGACTAGGTGAAATTAACGGAGACATAATTACATCAAAGGATACACCCATCTTCTATGAAGAGGCGAAGAAACATCTGACAGACATTCTAGAGTATAACAGTCATACAACCAAGCATCCAACAGTTCATACCTCAAAGTCCTTGATAGGAATGCTTTCCCTCCCTCAACGCAACGCATCATCACCTAGGAGTAGCCCCAGGTTAAAAGGCTGCATTGACCTTTCACCCGAAGAGATAAATATTTCTGCCATTCAACAGGATGAGAGGACAGAATATGCAAAAGAAAGAAATCTGTCTGACGAAGATTCAGGGAGTGTTGCATGTGGTAATAGTGAAGTACTAGATGGTAAGGCTGATCAGGATAGACACTCCATGAAACAAGAAACTGCACAAGATGGTGACATTATGAATATTGAAGAAATCGACAAGCCGGCTTGCTCCGAAACGATTTGCAGTGAAGGGACCACCCTAAAAGAGCAGTGTACATGTACCTCATCACTAGAACTGATTGAAGGAGACGAACCTGGCAGAGAGCATGCAGGGATGTTGCTGAGCTATCCTGAGAATGTGGTTGAGAGCCTAGAACACCAAGAGCCAAAAACTCCCAGATCAAGTGCATCACTTGAACTTATATCACAAATTTCACCCGAAGGGAACCACGAAAAGCAAGAGCAACCCAGCCCTGTATCTGTCCTTGATCCATTCTTCTGTGAAGATGTTGACAGTCCTGACCATGAAACTATGATAAAATGTGAGATGCATCAAGATATGATGAGGCCCCACATACCAGATGCTATATCAGACCAATGGGTCTTCTGGGAGGACGAGGATGCCAGGCTAAGTTACATAAAAGCAATGCTGGAGCTATCAGAACTATGCACATGCCAAAATCTAGAGGTGTGGTATCTAGAAGATGAATTGATCAGCCCTTGCATGGTTGAAGAACTACACCAAGGCAATCAAACAGATGATCTAAAGCTCCCTTTTGATTGTATCTGTGAAGCTATAACAATAATCCAGGAGACATATTTTAGAAACCCTCCTTGCTTATCTTTTCTCATGCACAAGATACAGCCACCTCCAATGGGAGAGAACCTCATCCAAGAAATAAATAAGCATATCGAGAGACATCTCCATAATCAATTTCCAAGAACATTGAACCAGCTAGTTAACATAGATCTGGAAGATGGCACTTGGATGAATCTTCAATTGGAAAGTGAAGAGATTATTGTTGATACATGGGAGTTCATACTAGATGAACTATTAGAAGAGGTCGCTAATGATTTGTTGATTTGA</cdnaseq>

Protein Sequence

<aaseq>MGKRSQRLARRQENIGCMWGLIGMLYFRRDAKFLLDRKQGSRRHTFGGLSGRRHSRKKSRDFEETDEYGEDNIEECDTRKQTVKRLMEDELGKVKQVKKIPKEEVQRILADLGHDVCLEKSSMQSTKQNRAKSHSTSTAMASPSGLLDPSGSKSMKQAEEDDLELSLADFVGELYGYHDDYKNKSELCPELKSHIHTKLSELKSVPCQRAYEESPDWGQREHFYEKYICNSRSYQSNKLVDAPDMLSPEKELFLKTLQKPSPHTLEKENTQNNQNRQVVTKLEPRKILEKGENTKNSKQHEVAIKTHSKEGRNIFFWRKDKSIMKGTSEGTNSSKMVNKIVILKPNPRGIDTTVATASTCLDQQSCTIQSPKYPATESSKFSIKEVRRRFKIVTGDTRRGRPSVYEDDLQRDSQRINDSVFKVRKDSKQSDKDNLRPLTSGKQKQRNDGLGEINGDIITSKDTPIFYEEAKKHLTDILEYNSHTTKHPTVHTSKSLIGMLSLPQRNASSPRSSPRLKGCIDLSPEEINISAIQQDERTEYAKERNLSDEDSGSVACGNSEVLDGKADQDRHSMKQETAQDGDIMNIEEIDKPACSETICSEGTTLKEQCTCTSSLELIEGDEPGREHAGMLLSYPENVVESLEHQEPKTPRSSASLELISQISPEGNHEKQEQPSPVSVLDPFFCEDVDSPDHETMIKCEMHQDMMRPHIPDAISDQWVFWEDEDARLSYIKAMLELSELCTCQNLEVWYLEDELISPCMVEELHQGNQTDDLKLPFDCICEAITIIQETYFRNPPCLSFLMHKIQPPPMGENLIQEINKHIERHLHNQFPRTLNQLVNIDLEDGTWMNLQLESEEIIVDTWEFILDELLEEVANDLLI</aaseq>

Gene Sequence

<dnaseqindica>1..151#673..734#1474..3001#3080..3183#3266..3515#3621..4165#ATGGGGAAGAGAAGTCAAAGACTGGCTAGGCGTCAGGAGAACATAGGCTGCATGTGGGGCCTCATCGGCATGCTCTATTTCCGACGTGACGCTAAGTTTCTGTTGGACAGGAAGCAAGGAAGCAGAAGGCACACTTTCGGTGGGCTTTCAGGTAATTCTCTCCAGGTTCATGGTTAAAGTAAAATGTAATACCTGATGAACATGATGACAATGCAAATAGGATCGTGATCATGATCTGAGCCACTTACTTTGCTGGTAGAACTCTGAGGATATGGTTTTGAAATTTAATATGCATTGTGGTCATCTGCTATACAAGAGACTGAAAACAGAATATGTAAAGCATTCTTATTATTAACTCCAGAAAAAAAAACTGATTACTGTCAGTAAATATGAAAGTCTACAATTTTGCTTCTCGTTTTTTTGATTACCATTACTAAGCAGTTTGTGAAATTGTGTCAACTATGTGCAGCAATATAAGTAATGCAGCACCTGCATGGCAATACAATCAATCTATGATATTTGACCTTCAGTAAACATTTTTCTGATGTCATAGACTGTCAATAAATCCCTCTAATCTACATTTCGGAATCATCTGGCAAATATAAAGGCATTCAAGAAAAATATTTAGTTATCATAATTTGTATATCTTCTTACAACTCTGCATGGTCGCAGGTAGGAGGCACTCAAGAAAGAAATCCAGGGACTTTGAAGAAACAGATGAATATGGGGAGGATGTAAGTTATTTTAGTAAGTATGTAATTTTAATGGTAAAAAGCATAGATGCTCATGCTGGTGGTTGCTGTTGTCTGCTTTTGTTAACACCACGAATATGCAACAGAAGTCTAGTGATCCTAACCATACTTGACATTTCAGTTACTTGTGTAACAAAATAATTTTGATGAATGGAACTGAAAGTGCCATATTGATGTTAATGGCAGTCAATTCCTTCATGCTAAGTGTTTTCTTCAGAGCCAGAACATATCTAGAGCAAGTATGGAGAAAAGAAGTCGTCCAAAATCCAAATGCAACATATGAACTTGGTACTGCTTCGAAAACATGCACGGAAAAGTTTAGCTTAATGCAAGTTGTGGAACAATAAACTTAAAAAAAAAAGCATGACAAAATGATCCCACATATACTTCTTTTTGCCTACTTATCATGTGTATGCTTGGATTTAGCAACCATTATTCCTTCTTTGATGAAAGGGACTTGATTCAAGCATTCTGCATTAACCAGCAGAGAAGAAAAAATTTGAGTAGACAGTACTAGCAATCTTTACATTGTAATCTGTTGGGTGAGTTCTAAAACCAGATTTGCTTCAAGTGTATGTTGGCATGGTAAACATCAAATAGTTTTAACTGATATAGCTTTCCATCAAGCTTATGTTTATCATGTAGACAGTACTACCTATTTCTTTTGATGCATGTTAAAGATTACTTCTTGGAATAAGTGTATTGTTCTTATATTTCTCAGAACATAGAGGAATGCGACACAAGGAAACAAACCGTCAAAAGACTCATGGAGGACGAGCTGGGTAAGGTAAAACAGGTGAAAAAGATTCCCAAGGAAGAGGTTCAAAGAATATTAGCTGACCTGGGACATGATGTCTGTCTGGAAAAAAGTTCAATGCAGAGCACCAAACAAAACAGAGCCAAAAGTCACAGCACAAGCACAGCCATGGCTTCTCCATCTGGTTTGCTGGATCCAAGTGGTTCCAAATCCATGAAACAGGCAGAAGAAGATGATCTTGAACTTTCTTTAGCAGATTTTGTGGGAGAACTCTATGGGTACCATGATGATTACAAAAATAAGAGTGAACTGTGTCCAGAATTGAAGTCACATATCCATACAAAGCTTAGTGAGTTGAAGAGTGTGCCCTGTCAACGTGCTTATGAGGAATCTCCAGACTGGGGGCAAAGGGAGCATTTCTATGAAAAATATATTTGTAACAGCAGATCTTATCAATCTAACAAACTAGTAGATGCACCAGATATGCTAAGCCCAGAGAAGGAACTTTTCTTGAAGACACTTCAGAAACCGAGTCCGCATACTTTGGAGAAGGAGAACACCCAAAATAATCAAAACAGACAGGTAGTGACCAAGTTAGAGCCAAGGAAAATTCTTGAAAAAGGTGAAAATACTAAGAATTCAAAACAGCACGAGGTAGCCATCAAAACACATAGTAAAGAGGGCAGGAATATCTTTTTCTGGAGGAAAGATAAATCAATTATGAAGGGTACATCAGAAGGAACTAATAGTAGTAAGATGGTTAACAAAATAGTTATACTAAAGCCAAATCCAAGAGGGATCGATACTACTGTAGCTACAGCCTCTACATGTTTAGATCAGCAATCATGCACAATTCAATCTCCAAAATACCCTGCAACAGAGAGTTCTAAATTTTCAATTAAGGAAGTCAGGAGGAGATTCAAAATTGTGACTGGTGATACTAGAAGAGGAAGACCATCAGTGTATGAAGATGATTTACAAAGAGATTCACAAAGGATCAATGATTCAGTCTTTAAAGTCAGAAAGGATTCTAAACAGTCAGATAAGGACAATTTGAGACCTTTGACCAGTGGTAAGCAAAAGCAAAGGAATGATGGACTAGGTGAAATTAACGGAGACATAATTACATCAAAGGATACACCCATCTTCTATGAAGAGGCGAAGAAACATCTGACAGACATTCTAGAGTATAACAGTCATACAACCAAGCATCCAACAGTTCATACCTCAAAGTCCTTGATAGGAATGCTTTCCCTCCCTCAACGCAACGCATCATCACCTAGGAGTAGCCCCAGGTTAAAAGGCTGCATTGACCTTTCACCCGAAGAGATAAATATTTCTGCCATTCAACAGGATGAGAGGACAGAATATGCAAAAGAAAGAAATCTGTCTGACGAAGATTCAGGGAGTGTTGCATGTGGTAATAGTGAAGTACTAGATGGTAAGGCTGATCAGGATAGACACTCCATGAAACAAGAAACTGCACAAGATGGTGAGTACATAATACCATAGTCATTAAAATTATCAAATATTACGTGGCTCTTCTCTAAGCACAAAGGAATATTTGCAGGTGACATTATGAATATTGAAGAAATCGACAAGCCGGCTTGCTCCGAAACGATTTGCAGTGAAGGGACCACCCTAAAAGAGCAGTGTACATGTACCTCATCACTAGTATGTTCACACCAATACTTAGTGATATTCCATCTGGTCTCCATTGTTGTTTTGAGTTATAATGTGTTTATCTACACTGCAGGAACTGATTGAAGGAGACGAACCTGGCAGAGAGCATGCAGGGATGTTGCTGAGCTATCCTGAGAATGTGGTTGAGAGCCTAGAACACCAAGAGCCAAAAACTCCCAGATCAAGTGCATCACTTGAACTTATATCACAAATTTCACCCGAAGGGAACCACGAAAAGCAAGAGCAACCCAGCCCTGTATCTGTCCTTGATCCATTCTTCTGTGAAGATGTTGACAGTCCTGACCATGAAACTATGATAAAATGTATCTTCTCATCTAAACATATCAAAATTACATTTCCTTTTGACCTTAAGAAAATATGTGTTCTAATATAAAGGTGATGTATTTTGGTCTTGCAATTATCCACAGGTGAGATGCATCAAGATATGATGAGGCCCCACATACCAGATGCTATATCAGACCAATGGGTCTTCTGGGAGGACGAGGATGCCAGGCTAAGTTACATAAAAGCAATGCTGGAGCTATCAGAACTATGCACATGCCAAAATCTAGAGGTGTGGTATCTAGAAGATGAATTGATCAGCCCTTGCATGGTTGAAGAACTACACCAAGGCAATCAAACAGATGATCTAAAGCTCCCTTTTGATTGTATCTGTGAAGCTATAACAATAATCCAGGAGACATATTTTAGAAACCCTCCTTGCTTATCTTTTCTCATGCACAAGATACAGCCACCTCCAATGGGAGAGAACCTCATCCAAGAAATAAATAAGCATATCGAGAGACATCTCCATAATCAATTTCCAAGAACATTGAACCAGCTAGTTAACATAGATCTGGAAGATGGCACTTGGATGAATCTTCAATTGGAAAGTGAAGAGATTATTGTTGATACATGGGAGTTCATACTAGATGAACTATTAGAAGAGGTCGCTAATGATTTGTTGATTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA011613