BGIOSGA011616

From RiceWiki
Revision as of 09:34, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA011616| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA011616, complete gene.| tag = OS03G01...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA011616

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA011616, complete gene.

LocusTag

OS03G0105700

Ensembl Transcript ID

BGIOSGA011616-TA

Ensembl Protein ID

BGIOSGA011616-PA

Length

2254

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:579905..582158

Sequence Coding Region

581876..582158,581739..581794),complement(580967..581092,580297..580440),complement(579905..580192

Genome Context

<gbrowseImage1> name=IndicaChromosome03:579905..582158 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:579905..582158 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGACGAGTCGACCGCCTACCGCAACCTGCGGGGCCCGTCGCCCTTTGTGTTGGCCATGAAAACCCGCCTCGCCCCGCCGCCGCAGCTCTCCGATCCGCCTCCGCCTCCCCTCCCCGCCGTTCCTCCCTCGCTCCTACCGCCCCTCCTACCACCACCCGAGAAGCGACGCCGGGGTCGTCCCCGCAACTGCGACCGCCTCACTGCGCCGCCGGGCTTTTTCGCCCCGCTGCCGCCGCCACCGCCACCGCAACCTCAACCCCCCACGCTGCCTGCGCCTCACGGGCAGGGGCAATTCGGTGGCCTCCAGCCCCACCTTCTCCAAATTGATGCAGGAGAGGAAATCATACCGAAGATTACGGCACTGTCAAAGTCAAATGGGAGGGTGATCTGTGTTCTTTCAGTGCTTGGAGCTGTTCAGGAAGCAACTCTGCTCCTATCATCCGGTGTTACTTCATATCACAAGGGTCCTTTGGAAATAATTCGTTTGTTCGGATCCATTTTGACACCAAATGACCAAGGATGCTTGCGTGTAACCCTTGCTTCTGGCGATAGTTCTGTGATTGGTGGTGTTATCACTGGACCTCTCAAAGCTGCAACACCTGTCCAGGTAGTTGTTGCAAGCTTTTACAGCGATGTATACTGGCCAAACAGGACACCTAAGATCATTGCACCTTACCCTAATTCCCAGTCTACCATCAGGAATGGCAGCACTCTGTCTAGTAAGCATGTCAATCCAGGATATGTATCTTACACTGCAGTGGATCAACATGAATCAAGTGAGGTTGATGTTAAGCCCTCACTCGGGATGCTTAACTTAGCATCATTGGATCGACATGAATCAAGTGAGGTTGATGTCAAGCCCTCACTCGGGATGCTTAACTTAGCATCCTTGTAG</cdnaseq>

Protein Sequence

<aaseq>MDESTAYRNLRGPSPFVLAMKTRLAPPPQLSDPPPPPLPAVPPSLLPPLLPPPEKRRRGRPRNCDRLTAPPGFFAPLPPPPPPQPQPPTLPAPHGQGQFGGLQPHLLQIDAGEEIIPKITALSKSNGRVICVLSVLGAVQEATLLLSSGVTSYHKGPLEIIRLFGSILTPNDQGCLRVTLASGDSSVIGGVITGPLKAATPVQVVVASFYSDVYWPNRTPKIIAPYPNSQSTIRNGSTLSSKHVNPGYVSYTAVDQHESSEVDVKPSLGMLNLASLDRHESSEVDVKPSLGMLNLASL</aaseq>

Gene Sequence

<dnaseqindica>1..283#365..420#1067..1192#1719..1862#1967..2254#ATGGACGAGTCGACCGCCTACCGCAACCTGCGGGGCCCGTCGCCCTTTGTGTTGGCCATGAAAACCCGCCTCGCCCCGCCGCCGCAGCTCTCCGATCCGCCTCCGCCTCCCCTCCCCGCCGTTCCTCCCTCGCTCCTACCGCCCCTCCTACCACCACCCGAGAAGCGACGCCGGGGTCGTCCCCGCAACTGCGACCGCCTCACTGCGCCGCCGGGCTTTTTCGCCCCGCTGCCGCCGCCACCGCCACCGCAACCTCAACCCCCCACGCTGCCTGCGCCTCACGGTGCTCAATCCCGTACTTTCCAACTCTAACTCTTCACTTGTGCATGTGCTGATTTTTTTGCTTCTTGTGTGGTGTGGACAGGGCAGGGGCAATTCGGTGGCCTCCAGCCCCACCTTCTCCAAATTGATGCAGGAGAGGTATCTATTTCTCTCACTCTGCTATATAGATTGTGATGTGCCTCTGCTACCGCTGCTGTTCATGGTTGGCCCCCTCTTTTTGCTCGCTCAACGACCCACAGCTTAGGAATTAAGGATCACCGACTAGGATTAGGATCAACGTACTACAAGTACACCCGGTGACTGCCTTCTAAATTACATTTGATTTCGTATTTAGATATGATTGATAATTTCAGTGAAAACCGGTGTTTCAAACCTTAACTGCAATTCGATAGGGATGTCACAAAAACATGGTTTCAACAGATTGGGAATAGCTCTACATATCCTGCAAAAATGTGTGGATTTTGTCCACCACCAAATCGAGCCATATCTGTAGAAAAATCACTGAAGCAGAAAATAGAAAACTTCTTTTAGTGTTTCTGCCCACCACATTCTTTGCTAAAAGATCCATATGCAAACTTTCACAACATTTTTCATGCCGCTCCAAGAAGAGATTTTTTTTTTGTTTATAGTTTTCTCAAATATGCAACTGCAGAACTGATCATAAAAAAGGCAGAGTGGTGTATGCATAATGCTTCTTTTGGTGCAGATGATGTATGGCTACTTACTATGTTTTCTCTAATCAAAATGTGGCAAGCGATTTTATTCCTCTGAAATGACCATGCAGGAAATCATACCGAAGATTACGGCACTGTCAAAGTCAAATGGGAGGGTGATCTGTGTTCTTTCAGTGCTTGGAGCTGTTCAGGAAGCAACTCTGCTCCTATCATCCGGTGTTACTTCATATCACAAGGTTCAGCTTTTATTTCCATATGGCATATGGGGAGGGAAACACTGCTCAAAGTTTAACACTCCCCCTCCCCCCATTTAGATAACATAGTATTCCAAATATATAAATGTCAAGTGTATGTTCAAGTGATTTTTAAATAATTATCGAAGCGGTGAGGGGGCATTCCAGTTCTTGGCCTGGATTAACTCAAAGGGTGGAATGTAGGAGTGCCAGTGTTTGAGATGGCGGCCTTGAATTTGATCCCATCCATGTGCAGGGGTGGAATTGCTGGCATGTGTTCCAAACTAAAATAAAAAACCGCAAATGTAGAAGGATGTTTTTCCTCAAATTGAGCTTTTTGTATTATTAAACTTACTGCCAGGTCAGTTACTTTTATAAAAGCAAACAGATAAAGTTACAGAGTTACATAAGTACAACATCAAACTTAAAATTAAATAATCTGTAACCAATCAAATGAATAACGTTGTTGCTTATTTAGCTAAGTTACTGTGACAAAGTTGATACCAAAACTCTCATTCAATTTTTGCAGGGTCCTTTGGAAATAATTCGTTTGTTCGGATCCATTTTGACACCAAATGACCAAGGATGCTTGCGTGTAACCCTTGCTTCTGGCGATAGTTCTGTGATTGGTGGTGTTATCACTGGACCTCTCAAAGCTGCAACACCTGTCCAGGTATCTTCAAATTTTTGAGACAGGGATATGCTCAATCAGTTTTTAGTACCACATATCATGGTAACAACAGGCCACAATTCACATACATTTTTATACTCTTCCAGGTAGTTGTTGCAAGCTTTTACAGCGATGTATACTGGCCAAACAGGACACCTAAGATCATTGCACCTTACCCTAATTCCCAGTCTACCATCAGGAATGGCAGCACTCTGTCTAGTAAGCATGTCAATCCAGGATATGTATCTTACACTGCAGTGGATCAACATGAATCAAGTGAGGTTGATGTTAAGCCCTCACTCGGGATGCTTAACTTAGCATCATTGGATCGACATGAATCAAGTGAGGTTGATGTCAAGCCCTCACTCGGGATGCTTAACTTAGCATCCTTGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA011616