BGIOSGA011625

From RiceWiki
Revision as of 09:34, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA011625| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA011625, complete gene.| tag = OsI_096...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA011625

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA011625, complete gene.

LocusTag

OsI_09617

Ensembl Transcript ID

BGIOSGA011625-TA

Ensembl Protein ID

BGIOSGA011625-PA

Length

5032

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:369939..374970

Sequence Coding Region

374775..374970,374381..374473),complement(374118..374284,373908..374033),complement(372994..373174
,372314..372449),complement(372125..372242,371664..371753),complement(371100..371207
,370812..371012),complement(370555..370638,369939..370424

Genome Context

<gbrowseImage1> name=IndicaChromosome03:369939..374970 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:369939..374970 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGCCGCCACAAATGTATGAGCGCCGCCTCCTCGCCGCCGCCTCCCTCCTCCTCTCCGCCGATGCGCAGGGCCAACCACCCCACGCCGCCGCCCAACTCGGAGTCGGAGTCACGGCCGAGCTCAAGCCGCACCAGGTCGATGGCGTCGCGTGGCTCATCCGCCGCTACCAACTCGGCGTCAACGTCCTGCTCGCGGACCATGGCCAGATGGGACTTGGCAAGACCCTCCAAGCAATCTCTTTGTTGAGCTACCTCAAGATCCACTCCATCTCACCTGGACCATTTTTGGTCTTATGTCCTCTAAGTGTCACCGATGGCTGGCTCTCGGAATTCAATAAATTTTGTCCTTCTTTGAGGGTTATCCAGTATGTTGGTGATAAGTTGCACCGTCGTGATCTCCGGAGAATGATGTTTCAGGATGTCCAAAAATCTTCATCGTCATCTCATTCCACTGAGTTACCGTTTGATGTCATGATGACAACCTATGACATAGCCTTAATGGACCAAGAATTTCTTTCACAAATTCCTTGGCACTATGTTGTCATTGATGAGGCCCAACGTCTTAAAAACCCATCCAGCGTACTGTATAATGTCCTTGAGCAACGCTTTATCATGCCAAGACGTCTGCTACTAACGGGCACCCCTATCCAGAATAACCTTTCTGAACTATGGGCATTGATGCACTTTTGCATGCCCTCGATTTTTGGTACCCTGGATCAATTTCTTTCTACTTTCAAGCAATCAGGTGATTCATTGACAGGTGGCGAAACTAATAAAACGGACAAACAGTTTAAGATCCTTAAACATGTACTGAGAGCATTTATGCTGAGACGAACTAAAGCTTTACTAATTCAAAGCGGAATTTTGGCATTGCCTTCATTAACTGAGTTAACAGTGATGGTACCTCTGACACCCTTACAGAAGAAACTATACTTGTCAGTATTGAGAAAAGAGCTGCAAACACTACTTACATTTACTGGAGGATTGTCCCGCCACCAGTCTCTGCAAAACATCGTTATACAACTGCGAAAAGCTTCTAGTCATCCATATCTATTCAGTGGCATTGAACCTGAGCCTTATGTGGAAGGGGAGCATTTGGTTCAGGCTAGTGGAAAGCTTGTCATGCTAGATCTCATTCTTAAGAAGCTCCATGAAGTAGGCCATCGAGTTCTGCTATTTGCTCAGATGACTCAAACACTGGACATTCTTCAGGACTTCTTAGAATTGCGTCAGTACACCTATGAACGTCTGGATGGTTCAGTGCGTGCTGAGGAACGGTTTGCAGCAATAAAAAGTTTCAGCTCTCAACCTACCAAGGGTGTTGTCAGAGATGATAATCAGAGTGGAGCTTTTGTTTTCATGATATCAACTAGAGCAGGGGGTGTTGGCCTTAATCTCATTGGTGCTGATACTGTTATTTTTTATGAGCAAGATTGGAATCCTCAAGCTGACAAACAGGCCTTGCAGCGTGCACACCGCATTGGACAGTTAAATAATGTCATCATGCGAAGAGCAGAAAGAAAACTTAAGCTTAGCCACAGCGTTATTGGAGAGGAGGATGCAACTTATGGGAAGGGGAAATATGTAGAAAATGAAGCTAGCGACATGCGCTCGATTATATTTGGCTTACACCTATTTGATACTTCAGATACGACTGCAGAGACAATGAATGATGACACAGCTTCGGAGACTATCAAAGAAGAGACTATGTTGAAGCTGAAATCAATGTCTGAAAAAGTAGTGTTGATGCGTAGTCATGAACCTTCAGAAAAGGATGAACGGGCATTCGAAATCAATCCAAATATGACAGACAACAGTGGGGCTGTTGTTACGAGGGTATCTGATTCCGTTAATGTTGATCCGGATTTTAATGAAGCCGCATACTTATCCTGGCTTGAGAAGTTTAAAGAGTCTTCGCATTCTAAGGAAAATACCAGAGCTGAACTAGAAAGGCAAAGAATAGCACCTGAAGAAAGTTCCTAA</cdnaseq>

Protein Sequence

<aaseq>MAPPQMYERRLLAAASLLLSADAQGQPPHAAAQLGVGVTAELKPHQVDGVAWLIRRYQLGVNVLLADHGQMGLGKTLQAISLLSYLKIHSISPGPFLVLCPLSVTDGWLSEFNKFCPSLRVIQYVGDKLHRRDLRRMMFQDVQKSSSSSHSTELPFDVMMTTYDIALMDQEFLSQIPWHYVVIDEAQRLKNPSSVLYNVLEQRFIMPRRLLLTGTPIQNNLSELWALMHFCMPSIFGTLDQFLSTFKQSGDSLTGGETNKTDKQFKILKHVLRAFMLRRTKALLIQSGILALPSLTELTVMVPLTPLQKKLYLSVLRKELQTLLTFTGGLSRHQSLQNIVIQLRKASSHPYLFSGIEPEPYVEGEHLVQASGKLVMLDLILKKLHEVGHRVLLFAQMTQTLDILQDFLELRQYTYERLDGSVRAEERFAAIKSFSSQPTKGVVRDDNQSGAFVFMISTRAGGVGLNLIGADTVIFYEQDWNPQADKQALQRAHRIGQLNNVIMRRAERKLKLSHSVIGEEDATYGKGKYVENEASDMRSIIFGLHLFDTSDTTAETMNDDTASETIKEETMLKLKSMSEKVVLMRSHEPSEKDERAFEINPNMTDNSGAVVTRVSDSVNVDPDFNEAAYLSWLEKFKESSHSKENTRAELERQRIAPEESS</aaseq>

Gene Sequence

<dnaseqindica>1..196#498..590#687..853#938..1063#1797..1977#2522..2657#2729..2846#3218..3307#3764..3871#3959..4159#4333..4416#4547..5032#ATGGCGCCGCCACAAATGTATGAGCGCCGCCTCCTCGCCGCCGCCTCCCTCCTCCTCTCCGCCGATGCGCAGGGCCAACCACCCCACGCCGCCGCCCAACTCGGAGTCGGAGTCACGGCCGAGCTCAAGCCGCACCAGGTCGATGGCGTCGCGTGGCTCATCCGCCGCTACCAACTCGGCGTCAACGTCCTGCTCGGTATGTAATGTACGATGCATCCTCCCTCCTAGCTAGGGTTCCCCAACTCACTCATCTCCCACGCATGGAATGCAGGTGACGAGGTCGGTCTCCATTTTCTTTTCCTTCCCCGCCGCGCCGAGCTTCTTCAATACTCCATGTGCCTGCTCATGAATACGAGGAGGATCGACTCCGTCTTGTTCTATGCTGTTTCACCTCACCTTATTTCATCAAACACTTTTCCGCACCACCATTTTTCGTTACTGTTAATAATGTGTAATCAAGCTCATGTCATGTGACTGCTGTTTTTTCTTATGTCGGACGGACCATGGCCAGATGGGACTTGGCAAGACCCTCCAAGCAATCTCTTTGTTGAGCTACCTCAAGATCCACTCCATCTCACCTGGACCATTTTGTGTGTACCGCACCTACCCATTTGGGATCTCCTTAGTATCTTGTTGCTTTCTTACAGTTTGGGTTTTGACATCATTGACCCTGGCTATGCTTGCAGTGGTCTTATGTCCTCTAAGTGTCACCGATGGCTGGCTCTCGGAATTCAATAAATTTTGTCCTTCTTTGAGGGTTATCCAGTATGTTGGTGATAAGTTGCACCGTCGTGATCTCCGGAGAATGATGTTTCAGGATGTCCAAAAATCTTCATCGTCATCTCATTCCACTGTATGCTTTCTCCCAACTTCTTCTTTTACTTACTCTTATACCTTACTCAAAATTGCTGACACCAACTTCTTTTGCATGCAATAGGAGTTACCGTTTGATGTCATGATGACAACCTATGACATAGCCTTAATGGACCAAGAATTTCTTTCACAAATTCCTTGGCACTATGTTGTCATTGATGAGGCCCAACGTCTTAAAAACCCATCCAGCGTATGTAAAGCCTTTTTATTCACGTAAATACAATCATAGTCATTCTTTTTATTGGATTTGTGCAATAAAAATAGTTCATATTTAGTTCCTGGCAGCTGCCTTACACGGTTACACCTTGTACTTTTAAACCGGTCATTTTATCCCTTGTACGTTCAAAACCGGATCAAATCAGGTCCAAAGCTGACAGAAGGTGCTTTTCTGCAGACTTGGCTTCCTTTGTGGCAAGTGTGCTAATCTGGCGGGTTATCACCCACATATGCAGATTTTAGTCACAGAAGATCCAACTGACGATTAAATTTGGGTTAAAATGAAAATTAATGCCTTGATCCACTTAGCTGTTTTGTGCTTCGTGCAAACAGAGGTGCTGAGTGAGAAATTGATCTGGTTTTGAAAATACAGGGGATAAAATAAACATATTCAAAATACATGGGAGTAAACAAACTCCAAATTAGAGGGACCAAAAATGTGGATTTTTCATCTGCTTAAGATTTCTTTTGTAGTGCTGCCGTCATCATCTCTCTGCACTCATTGGTAGCACTGTACTATAAACTACAAGTGATGCATGTATTGCTGGTTTAGCTTTCAGTTTTATTGTACAATGATGGAAGTCTACAATTCCCGTTTCTGTAAAATCCTTATTTTCAAGTGGCTGGAGGGTAAATTTACTGAGTACATAATCTTGGCAGAACATTTGTAGTGTCCAACTTATTTACTAGGTTCTGTGTTTTCCCAGGTACTGTATAATGTCCTTGAGCAACGCTTTATCATGCCAAGACGTCTGCTACTAACGGGCACCCCTATCCAGAATAACCTTTCTGAACTATGGGCATTGATGCACTTTTGCATGCCCTCGATTTTTGGTACCCTGGATCAATTTCTTTCTACTTTCAAGCAATCAGGTGATTCATTGACAGGTATTGCTTTAAATGTAAAGGGATTCATTTTTAGCTGTAGTGTGTTACTGCGTTGCTTGATGCCAACAATGCCTTTTATGCTGGCTGTGAGCACTTTGTGCTTGTGCACCATCAATTCTGGTGATTTGGTGTTAGGAAGTCTCTTCCTTTGCTAGGACTTTCATAATCTCTTCTTGCTTTATGTTGTATGATATTTTCATAGGTACATTCCATAAAAAAAAACTTTCTTTTAGAAAGGAGGCCTGGGGCCAAAAATACTTTCGTAGGTACATTGTAGTTACTGGTTTTTAGATGTTATAAAACCCAACAAATATTAATAATTAGTTGGTTAGAGAAACATAAATTTGATTATTAACTCAGTGCATAACGGTTGGCAACTGGCAACCAAAATTCTTTGTGCTTTTCCAAATGTTTCTTTCTTGAGACCAATTTTTCCACACCAACTAATTCACTGCTCAATTTTGTGAGTGCCTTTCTGTTTTTTGACACTGCATTAATATGTCACAATTAAAGAATTTGAGTACCTTGTTTGATTTCTCAACAGGTGGCGAAACTAATAAAACGGACAAACAGTTTAAGATCCTTAAACATGTACTGAGAGCATTTATGCTGAGACGAACTAAAGCTTTACTAATTCAAAGCGGAATTTTGGCATTGCCTTCATTAACTGAGTTAACAGTGTATGATCCTATCCTTCCCACCTTGCATTTCTTATCCTCTTTATTTTATCAACTTCATGTGATCTTTACAGGATGGTACCTCTGACACCCTTACAGAAGAAACTATACTTGTCAGTATTGAGAAAAGAGCTGCAAACACTACTTACATTTACTGGAGGATTGTCCCGCCACCAGTCTCTGCAAAACATCGTAATGGATCAGTTTTTGTAGTCATACTGTATTAAAGCGCTTGTAGCAAAGAGAGTATTTTATTGAGAAACAAGTCATTTATCTTTTTTATAATGAGAAGCAAGTCATTTGGCATGCCCATCATACTTCATGGTTTCTTTATGCCATCTACATTCTATTATTTCACATACTGTAAGGATTTCTTTTTAGCACAAGAGTTAGGGTTTCACAAGTTTATGAATCATACCAGAGTGCTGTGATGTATGTTTCTTTGGTTAAGTTATGGTTTGTTGATATCTCATACTTTAAATCTGGGATCAATCAATAAGAACTGATAATTAAGAGCTCTTTACAAACTTAAGTTTCATCACTGTTCTTTTGATTCTCCTCAGGTTATACAACTGCGAAAAGCTTCTAGTCATCCATATCTATTCAGTGGCATTGAACCTGAGCCTTATGTGGAAGGGGAGCATTTGGTTCAGGTTAGTTATGCCCATTGTTAAATGTAATGCTAATAGCCTGCTTAGTTATAGCCTAGAATGTTGAACTACAGTGTGTCTCCATGACTTGAATATGTTATGCCTGCAAGTTTTGTGGCCTAAATGGGAGAACGAAAAATGAATGCATGAATCGGGTGTTTGATTTTTAAGCCATTTTCTTTTGAGTCTGAAAGCTGGCCAAAAGTGGTTCGAACTTGGACTTGAAGCAATAGGTATGGGTGCTGTGCTGTGGAGTCTGTGTATTGCATTGCCCGCTGTCTCTATGTTGTCAAAACATATTTGACGCGACATCGCTCTTCAGTTTCTTTTATCTCTTCCCTCATGATATATCTTGTATTGACAAATGAAATATTCTGCAAGCTTGAAGTTTAGTAAGGAACTTTTGGAGGGACTGTACAGATCTATTCATTAAATATATTTATTGTAATGTTTATTCAGGCTAGTGGAAAGCTTGTCATGCTAGATCTCATTCTTAAGAAGCTCCATGAAGTAGGCCATCGAGTTCTGCTATTTGCTCAGATGACTCAAACACTGGACATTCTTCAGGTTTTGTTTCTCCCCAGCTCTGCTAGCATAAATTTCCTTATAGTCTCTTGTACTGTTTATTATGATTTTGCATCATCCGTTCAACAGGACTTCTTAGAATTGCGTCAGTACACCTATGAACGTCTGGATGGTTCAGTGCGTGCTGAGGAACGGTTTGCAGCAATAAAAAGTTTCAGCTCTCAACCTACCAAGGGTGTTGTCAGAGATGATAATCAGAGTGGAGCTTTTGTTTTCATGATATCAACTAGAGCAGGGGGTGTTGGCCTTAATCTCATTGGTGCTGATACTGTGAGTCTGAATCAATGAGACCATAATGAATATCCTCTTGACTAAGAAATCAAGTGATGTTTTTCTTTATTTTGATGTGTTTTTAGTACCAGGCAAACAGTTCTGTATGGATGAATAATGAACCTATCTTTCTTCTAATTACTTAATCTTTTGTCCACCATTTTGTAGCGCAGGTTATTTTTTATGAGCAAGATTGGAATCCTCAAGCTGACAAACAGGCCTTGCAGCGTGCACACCGCATTGGACAGTTAAATAATGTATTATCAATAAATTTGGTATCACAACGCACAATTGAAGAGGTCAAGACTAACTTACTACCTGAGCCTTTACTTCTACGATTAAGTTCCTTCTGAGTTTTGTTTTAGCCCTTTTCCAAATTGAATTCAGGTCATCATGCGAAGAGCAGAAAGAAAACTTAAGCTTAGCCACAGCGTTATTGGAGAGGAGGATGCAACTTATGGGAAGGGGAAATATGTAGAAAATGAAGCTAGCGACATGCGCTCGATTATATTTGGCTTACACCTATTTGATACTTCAGATACGACTGCAGAGACAATGAATGATGACACAGCTTCGGAGACTATCAAAGAAGAGACTATGTTGAAGCTGAAATCAATGTCTGAAAAAGTAGTGTTGATGCGTAGTCATGAACCTTCAGAAAAGGATGAACGGGCATTCGAAATCAATCCAAATATGACAGACAACAGTGGGGCTGTTGTTACGAGGGTATCTGATTCCGTTAATGTTGATCCGGATTTTAATGAAGCCGCATACTTATCCTGGCTTGAGAAGTTTAAAGAGTCTTCGCATTCTAAGGAAAATACCAGAGCTGAACTAGAAAGGCAAAGAATAGCACCTGAAGAAAGTTCCTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA011625

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA011625&oldid=56448"