BGIOSGA011635

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Revision as of 09:34, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA011635| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA011635, complete gene.| tag = B1032F0...")
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Gene Name

BGIOSGA011635

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA011635, complete gene.

LocusTag

B1032F05.3

Ensembl Transcript ID

BGIOSGA011635-TA

Ensembl Protein ID

BGIOSGA011635-PA

Length

2220

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:47846..50065

Sequence Coding Region

50057..50065),complement(49796..49970,49422..49669),complement(48707..48788,47846..48558

Genome Context

<gbrowseImage1> name=IndicaChromosome03:47846..50065 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:47846..50065 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCCAAGTGGAGGTCGTGGATGCCGGCGACGCCAGCGGGTGGTTCCGGTGGCGGCGCTAACGACGGCGGAGGGGATGGAGAAGACAAGAAGAGCGGTGAGGTGGCGGAGGCGGTGATCAGCGTGCCGGTGCACTGCGACGGCTGCGCCCGGAAGCTGCGCCGCTCGGTGCAGCGTCTTGATGGTGTGGAGGAGGTGACCGTGGATTGCCGGACCAACACGGTGATCGTGAGGGGCCCCAAGGCAGCGGTGGACCCGGCTGGGATTGTGGAGGTCTTGGACAGGAGGACCGGGAAGAAGGCCCTGCTTTTGAGCTCGTTGCCGTCGGCCAACCTGAAGCCACCGCTGTCACCGGAGAAGAGGAGTTCTGAGACGGCGAAGAAAGATGCTGCAGAGCAGGACATGGGCAAAGAGATGTCAGAAGAGGACATGGAAATGGTAGTGGTGATGAGGATAGACCTGCACTGTGAGGCATGCTGCGAGGAGATCAAACGGAGGATACTCAAGATTAAAGGAGTGGAGGAAGTTACGCCGCATATGAAATCGTCCCAGGTGATGGTGAGAGGAAAGGTTGAGCCAGCAACCCTAGTAGGGCTCATCCACAAGTGGACAGGAAGGAGAGCCGCCATTTTCAGGGCAGAACCACAGCATCCGCTGCCCCCACCATCTGAGTCTCCGCCAAAGGTCGACGATGACAACGAGCCTCCAAAGGTAGCCGGAAGTACTGAGCCGGCCGAGGAGGAGGAGACAAAGCAAGGAGGAGACCCATCACCATCAGACGATGCGCAGGAGAAGAAGGAAGGGGAGGAAGCAGATCAGATGAAGGATCAGAAAGAAGAGCCGGAAGAGAAGGAGAAGAAGGAAGAACCAGATGAGAAGAACGAAGGAGGCGAAGCTGATGACCTGAAGCCCCTAACGGAGGACGACGCAAGCTACAATGGCGTCGCGGAGGAGAGCCACAGCACGAAGGATCACCTGTTCAGAGTTGCTCTCCCGAGATCAGTTGTCGCGGTTGCGCCGCCGGAGAGTGAGAAGATGGCCATGAACAGCCTCTGCTACAGCTACTACTACTACCCGGCATATCCGTATCCGTGTCATCAGTATTATCAATATCCGCAGCAGAACATATACGCCGCTGGTAATTATCCTGCAATGTATGGGTACTATCCACATCATGTGCCAGAGGACTTCAGTGACGCGAACCAAAATGTATGTACCGTCATGTAG</cdnaseq>

Protein Sequence

<aaseq>MAKWRSWMPATPAGGSGGGANDGGGDGEDKKSGEVAEAVISVPVHCDGCARKLRRSVQRLDGVEEVTVDCRTNTVIVRGPKAAVDPAGIVEVLDRRTGKKALLLSSLPSANLKPPLSPEKRSSETAKKDAAEQDMGKEMSEEDMEMVVVMRIDLHCEACCEEIKRRILKIKGVEEVTPHMKSSQVMVRGKVEPATLVGLIHKWTGRRAAIFRAEPQHPLPPPSESPPKVDDDNEPPKVAGSTEPAEEEETKQGGDPSPSDDAQEKKEGEEADQMKDQKEEPEEKEKKEEPDEKNEGGEADDLKPLTEDDASYNGVAEESHSTKDHLFRVALPRSVVAVAPPESEKMAMNSLCYSYYYYPAYPYPCHQYYQYPQQNIYAAGNYPAMYGYYPHHVPEDFSDANQNVCTVM</aaseq>

Gene Sequence

<dnaseqindica>1..9#96..270#397..644#1278..1359#1508..2220#ATGGCCAAGGTATACGCACGCACGGCTTGAATTGGCTAGTAATTAATTTTGCAGCAAGCATGCATTTGTCACCGGCGATCTATCGATGCATGCAGTGGAGGTCGTGGATGCCGGCGACGCCAGCGGGTGGTTCCGGTGGCGGCGCTAACGACGGCGGAGGGGATGGAGAAGACAAGAAGAGCGGTGAGGTGGCGGAGGCGGTGATCAGCGTGCCGGTGCACTGCGACGGCTGCGCCCGGAAGCTGCGCCGCTCGGTGCAGCGTCTTGATGGTAATTAATTAAATTAGGCATTCTTTCCTTTCAACATATATATACTTGCTGTTTGATTTGCTGAATCATTTGATTACGTACGCTCATGCATGTATGGTGTTTGTTGTGTCGTCGTCGTCGGTGAAGGTGTGGAGGAGGTGACCGTGGATTGCCGGACCAACACGGTGATCGTGAGGGGCCCCAAGGCAGCGGTGGACCCGGCTGGGATTGTGGAGGTCTTGGACAGGAGGACCGGGAAGAAGGCCCTGCTTTTGAGCTCGTTGCCGTCGGCCAACCTGAAGCCACCGCTGTCACCGGAGAAGAGGAGTTCTGAGACGGCGAAGAAAGATGCTGCAGAGCAGGACATGGGCAAAGAGATGTCAGAAGAGGACATGGTAATTGTAACCTCCCGTTACTGCTGCAAATAAATAGGGAAAGTGATTTCGTCCAACGAGGGGATATCCCCACTATTCATGCACGTCACCTAAATATTTATAAAAAAAATTCATCTTCTACAAGTTGTAATAAAAATAACAAATATATATGCGAATGTACGATAACTATTTTCAGTTTAATTTGTTTTTTTTTTCAACTTATAGGAGTTGAATTTGCTTTTGTATGTTTATGTAATGATATATTTCATATTAATCTATATTGTTATTTTTTAAAAAAAAATTAATAAATATTTAGATGATATGTAAACAACGAGATGTAAACAACGAGGGGATATCCTCTCAAGGATGAAAATCCATTACCCAAATAAATATTCTAATAACTAGTTAGGTAATTAGCATTCGATATAAGGTTTTACATTTCGGAATGTAACTTTTAATCTAAAATTTTGGAAACATCATACAAAATTAGAAATCTAAACATATTTTCGATGAATTAATTTGAACCAATTTTCAAACAAATTCAAAATATTTGGCTAGATCGATGCAATTTGTTCCTGCCAGGACCCACCGGTAAGTCCGAAATTTTACCCGTGCTAGCTTGTAGTAAAATTCGGAGAAATGATTGAATGCCAGGAAATGGTAGTGGTGATGAGGATAGACCTGCACTGTGAGGCATGCTGCGAGGAGATCAAACGGAGGATACTCAAGATTAAAGGTACTCCGTAGTAGTATATGTACTGTACATCTTAACTGTTAAGCAAGCAGTAGCTTTGCCAATTTAATTAATTGCAATTTAGATGAAACAGAGATAACAGCGCATGTTTTGACTGCACAATTGTGATCGAACTTCTTGCATTGGTCAGGAGTGGAGGAAGTTACGCCGCATATGAAATCGTCCCAGGTGATGGTGAGAGGAAAGGTTGAGCCAGCAACCCTAGTAGGGCTCATCCACAAGTGGACAGGAAGGAGAGCCGCCATTTTCAGGGCAGAACCACAGCATCCGCTGCCCCCACCATCTGAGTCTCCGCCAAAGGTCGACGATGACAACGAGCCTCCAAAGGTAGCCGGAAGTACTGAGCCGGCCGAGGAGGAGGAGACAAAGCAAGGAGGAGACCCATCACCATCAGACGATGCGCAGGAGAAGAAGGAAGGGGAGGAAGCAGATCAGATGAAGGATCAGAAAGAAGAGCCGGAAGAGAAGGAGAAGAAGGAAGAACCAGATGAGAAGAACGAAGGAGGCGAAGCTGATGACCTGAAGCCCCTAACGGAGGACGACGCAAGCTACAATGGCGTCGCGGAGGAGAGCCACAGCACGAAGGATCACCTGTTCAGAGTTGCTCTCCCGAGATCAGTTGTCGCGGTTGCGCCGCCGGAGAGTGAGAAGATGGCCATGAACAGCCTCTGCTACAGCTACTACTACTACCCGGCATATCCGTATCCGTGTCATCAGTATTATCAATATCCGCAGCAGAACATATACGCCGCTGGTAATTATCCTGCAATGTATGGGTACTATCCACATCATGTGCCAGAGGACTTCAGTGACGCGAACCAAAATGTATGTACCGTCATGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA011635