BGIOSGA011641

From RiceWiki
Revision as of 09:34, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA011641| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA011641, complete gene.| tag = OsI_095...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA011641

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA011641, complete gene.

LocusTag

OsI_09599

Ensembl Transcript ID

BGIOSGA011641-TA

Ensembl Protein ID

BGIOSGA011641-PA

Length

1938

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:261879..263816

Sequence Coding Region

261879..262665,262773..263379,263478..263545,263641..263703,263788..263816

Genome Context

<gbrowseImage1> name=IndicaChromosome03:261879..263816 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:261879..263816 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGCCGCCGCCGCCCAGGAACACCTCTCCCCCCACCTCCGCCTCCAACAACAGCAGCAGCAGCAGCAGCAAGGCCAAGAAGAAGGCGGTCACCCCCGCCCAGGTCGCCTTCCTTGTCGAGCGCTACCTCGCCGACAACGGCTTCTCCGCCTCCCTCGCCGCCTTCCGAACCGACGCCGCCCACCTCTTCACCAAGGCCGCCCCCGTCCCCCCCAAGGGCCTCCTCCCCCTCTCCGACATCCTCCACGACTACGTCGCCCTCAAGGAGGCCCGCCTCGCCGTCGACTCTGCAATGCACGCAATGCACAACCTCGTCTCGGCATACTACCCCCATCATCCTCCTCCCCCCGCGCCGGCGCCCTCCTCACCCACGCAGTTCTTCGCCGCCTCATCACCTCCAGGTTTGCTCTGCACCCCACCTGCTCGACGATTTGTCTTGCCGCGCTCCCCGACATCTGCCAGTGCTAGGAGTAAGGAGAATACCGTTCAATTGTTGCCTAATAGAGTAGTATATATGCTTGTTGTGTTGCTGCAGCCGTCCCCTGCTGGTGCTGGTGCTGTTGCTGGGTATGCTTCGCCAATCATACGCTACACGCAGACATCCTCCTCAGTTGTTGTCCACAACTCCAGCACATCAGAGGCCAACGCCATGTCCACACCAGCTCAGGCGCCAGCCGCAGCGCCTATCTCGTTCCCTGCCAAGAAGAGGAAGGCGGCGACTACAAAGTCTGCTGCAAAGTCCAAGAAAACCTGCATCGCGCCAACTATCAGCTCGCATCCAAAAGGTAAAACTGTGGCCTCTCAATTGTCGCTTGATAACTCAGAACGACATTCAGCCATGGCTAAGCTCCCTGTGCAAGGCTCATCTGTTGCAAAAAGCTTATTCAATCCTCTCCAACCTCAAGTCCATTCTTCTCCATGCACACCTCAACAAAACAATCCCATCGTTGCTTATCAAACAGAAAGGGCATCATCCTCCGTGGTTGCTAATGCTCATACCCAACAGGAGGTTGCTTCTTCTCAATGCTCAATGGTTTCTTCCAAGACTCTTATCGTCAGTCCTCTCAAAGGTGCTGCATATTATGCTGTTGAGAGAAGTTACCATGTCAGCTCCCCCTTGAAACCAAGCTCCCACAAATCATCCAAAAGGGAGCATGTCAAAGGGAAGCTGGATTTTGGTACTTGTGATGATAGGCCATGTTCAAATGAAGCGATTTGCGAAGAAGCCTCTACCTCCTCTGATGTCGAGAAGCAAGATGATTTTGACATCGACTTCACAAACCTAGACATATTTGATGGCGATTTTTCATTCTCTGAGCTTCTAGTTGACCTTGATCTTGACTCTGAAGGCGTTCATTGCCTCAACCCTCCCACCAATGCTGAAGTTCAAAGATTGGAGGGTGTAGCAGATCCTATGAAGGCAATGGCAGAAGATCCCACGGAGGATATCAATTCACAAGGAGCAGCATCAGCAGTCACTTGTGTTAGAGCTATAACTAAGAGGATAAAGATTGTTAGCCCTGTGAAGGGTCGTGCAGCCGCAGCTCCTTAG</cdnaseq>

Protein Sequence

<aaseq>MAPPPPRNTSPPTSASNNSSSSSSKAKKKAVTPAQVAFLVERYLADNGFSASLAAFRTDAAHLFTKAAPVPPKGLLPLSDILHDYVALKEARLAVDSAMHAMHNLVSAYYPHHPPPPAPAPSSPTQFFAASSPPGLLCTPPARRFVLPRSPTSASARSKENTVQLLPNRVVYMLVVLLQPSPAGAGAVAGYASPIIRYTQTSSSVVVHNSSTSEANAMSTPAQAPAAAPISFPAKKRKAATTKSAAKSKKTCIAPTISSHPKGKTVASQLSLDNSERHSAMAKLPVQGSSVAKSLFNPLQPQVHSSPCTPQQNNPIVAYQTERASSSVVANAHTQQEVASSQCSMVSSKTLIVSPLKGAAYYAVERSYHVSSPLKPSSHKSSKREHVKGKLDFGTCDDRPCSNEAICEEASTSSDVEKQDDFDIDFTNLDIFDGDFSFSELLVDLDLDSEGVHCLNPPTNAEVQRLEGVADPMKAMAEDPTEDINSQGAASAVTCVRAITKRIKIVSPVKGRAAAAP</aaseq>

Gene Sequence

<dnaseqindica>1..787#895..1501#1600..1667#1763..1825#1910..1938#ATGGCGCCGCCGCCGCCCAGGAACACCTCTCCCCCCACCTCCGCCTCCAACAACAGCAGCAGCAGCAGCAGCAAGGCCAAGAAGAAGGCGGTCACCCCCGCCCAGGTCGCCTTCCTTGTCGAGCGCTACCTCGCCGACAACGGCTTCTCCGCCTCCCTCGCCGCCTTCCGAACCGACGCCGCCCACCTCTTCACCAAGGCCGCCCCCGTCCCCCCCAAGGGCCTCCTCCCCCTCTCCGACATCCTCCACGACTACGTCGCCCTCAAGGAGGCCCGCCTCGCCGTCGACTCTGCAATGCACGCAATGCACAACCTCGTCTCGGCATACTACCCCCATCATCCTCCTCCCCCCGCGCCGGCGCCCTCCTCACCCACGCAGTTCTTCGCCGCCTCATCACCTCCAGGTTTGCTCTGCACCCCACCTGCTCGACGATTTGTCTTGCCGCGCTCCCCGACATCTGCCAGTGCTAGGAGTAAGGAGAATACCGTTCAATTGTTGCCTAATAGAGTAGTATATATGCTTGTTGTGTTGCTGCAGCCGTCCCCTGCTGGTGCTGGTGCTGTTGCTGGGTATGCTTCGCCAATCATACGCTACACGCAGACATCCTCCTCAGTTGTTGTCCACAACTCCAGCACATCAGAGGCCAACGCCATGTCCACACCAGCTCAGGCGCCAGCCGCAGCGCCTATCTCGTTCCCTGCCAAGAAGAGGAAGGCGGCGACTACAAAGTCTGCTGCAAAGTCCAAGAAAACCTGCATCGCGCCAACTATCAGCTCGCATCCAAAAGGTAAGTATCATCTTAACAAGGTTTGGACAAGAATTAGCAATAGGCTCTTGATTCCTGCTGTAACATTGCAAATATTGCTTGCTTACCACGTTCCAATCTAATCCCAGGTAAAACTGTGGCCTCTCAATTGTCGCTTGATAACTCAGAACGACATTCAGCCATGGCTAAGCTCCCTGTGCAAGGCTCATCTGTTGCAAAAAGCTTATTCAATCCTCTCCAACCTCAAGTCCATTCTTCTCCATGCACACCTCAACAAAACAATCCCATCGTTGCTTATCAAACAGAAAGGGCATCATCCTCCGTGGTTGCTAATGCTCATACCCAACAGGAGGTTGCTTCTTCTCAATGCTCAATGGTTTCTTCCAAGACTCTTATCGTCAGTCCTCTCAAAGGTGCTGCATATTATGCTGTTGAGAGAAGTTACCATGTCAGCTCCCCCTTGAAACCAAGCTCCCACAAATCATCCAAAAGGGAGCATGTCAAAGGGAAGCTGGATTTTGGTACTTGTGATGATAGGCCATGTTCAAATGAAGCGATTTGCGAAGAAGCCTCTACCTCCTCTGATGTCGAGAAGCAAGATGATTTTGACATCGACTTCACAAACCTAGACATATTTGATGGCGATTTTTCATTCTCTGAGCTTCTAGTTGACCTTGATCTTGACTCTGAAGGCGTTCATTGCCTCAACCCTCCCACCAATGCTGAAGTTCAAAGGTATGTGATAATGCTGCCTTTTGTTGTCGTGTGATGTATGTCCCTGGTGAAACTACAGATGCTAAGTGGTTCTGCCGTGTGCATCTGAATGAATACAGATTGGAGGGTGTAGCAGATCCTATGAAGGCAATGGCAGAAGATCCCACGGAGGATATCAATTCACAAGGTTCAGGGCTAACACTAATAATATCCTGCAGGCTGCAGCGTTATCATCCTATTTTTCCTAACATATGCTTTCTTTCTTGATGCCTAAATCGGCAGGAGCAGCATCAGCAGTCACTTGTGTTAGAGCTATAACTAAGAGGATAAAGATTGTTAGCCCTGGTATGAGTCTTCGCTTGGAGCTTGTGTCATGTTCGCAAACGCTCGAGAGATGTTTTTAACATGGTGTTGGTTGTTTGCTTGCAGTGAAGGGTCGTGCAGCCGCAGCTCCTTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA011641