Os12g0407100

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Revision as of 10:28, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0407100| Description = Conserved hypothetical protein| Version = NM_001189985.1 GI:297729100 GeneID:9266278| Length = 3413 bp| Definition ...")
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Gene Name

Os12g0407100

Description

Conserved hypothetical protein

Version

NM_001189985.1 GI:297729100 GeneID:9266278

Length

3413 bp

Definition

Oryza sativa Japonica Group Os12g0407100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:12453800..12457212

Sequence Coding Region

12453847..12454443

Expression

GEO Profiles:Os12g0407100

Genome Context

<gbrowseImage1> name=NC_008405:12453800..12457212 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:12453800..12457212 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>tctctccctctcacgcgggacgcggcgccaccacaatcgccgctgccctcgactgccgccgctccgccgtcgtcgcatccgtcatctcgccgccaccgatccccgcgccaccgccgtcaccgccgccctcggctgccgccgctccgccgttgtcgcatccgtcgtctccccgccaccgatccccgccgccggctcgccctcaaccgatccccatcaccgtcgtcacatccgtcgccctcaaccgatccccatcgccgtcgtcgtccaggattcacgtcgccgccgacgccttccgcgccgagctattcctcgctgccaccgatccccgccgatggctcgcccgatccccatcgccgccgtcgcgccgccggctcgcccgatccccatcgccgccgtcgcgccgctggctcgccctcgccagcgtctccccgcaggtcagtctcgtgccccgccgccactcgcatctcctcaccctcgcgattcccaaccctaaccatcgtctccccgccccgaaggtctccggcgccgccaccccccccaaacaaccggcgccgccaccgatccccgcccgccggaagccctcccgtcgccaggtag</cdnaseq>

Protein Sequence

<aaseq>SLPLTRDAAPPQSPLPSTAAAPPSSHPSSRRHRSPRHRRHRRPR LPPLRRCRIRRLPATDPRRRLALNRSPSPSSHPSPSTDPHRRRRPGFTSPPTPSAPSY SSLPPIPADGSPDPHRRRRAAGSPDPHRRRRAAGSPSPASPRRSVSCPAATRISSPSR FPTLTIVSPPRRSPAPPPPPNNRRRHRSPPAGSPPVAR</aaseq>

Gene Sequence

<dnaseqindica>48..644#tcctctccgccccctctttctcgctctcacgcgccgccgcaccctaatctctccctctcacgcgggacgcggcgccaccacaatcgccgctgccctcgactgccgccgctccgccgtcgtcgcatccgtcatctcgccgccaccgatccccgcgccaccgccgtcaccgccgccctcggctgccgccgctccgccgttgtcgcatccgtcgtctccccgccaccgatccccgccgccggctcgccctcaaccgatccccatcaccgtcgtcacatccgtcgccctcaaccgatccccatcgccgtcgtcgtccaggattcacgtcgccgccgacgccttccgcgccgagctattcctcgctgccaccgatccccgccgatggctcgcccgatccccatcgccgccgtcgcgccgccggctcgcccgatccccatcgccgccgtcgcgccgctggctcgccctcgccagcgtctccccgcaggtcagtctcgtgccccgccgccactcgcatctcctcaccctcgcgattcccaaccctaaccatcgtctccccgccccgaaggtctccggcgccgccaccccccccaaacaaccggcgccgccaccgatccccgcccgccggaagccctcccgtcgccaggtagaagatgatgaaattgaagtgttgtcaagttcctccaaggtgtttgtttttctcatggttaaagtgtagtacaaactgtgcaaataaaatcaatgttttcatcccgttcatatccatgactacaaattattaggacttgatctagcctgagatagccaatgatcgattcatttttttctttccaagttgtgctaatgtatatatgtttagaattacatgccatttgggttcacattgttcagaattatctaatctttctgtcattagagtagctggactggttgctccaacagttaaagctggtgcttgacgttggtataggttcttggtttaggaaatttgtgtgctgaatttttagctttggttgtttgcccttgacaaaccacggcatgactaggtatctcattgagcttgtctcggatcacagtagaattgtgttttcccaatttggttctgtcacattcaaaaaatagaagatagttcagtctattgaatgcaccatggagttgatagtgaactgtactagattaggagttttctatgacttcgtttggttgataataagtgattcttcccttttggaataaatacaaatcaacctagcatcttcttgtacatgggtataacagtgtgacaataaaatattctccttcccgaatcattcacagttactgcatataacaaattctactgctccgaaattagagcaatattggcaaaaattacagcaatgcacacttcaggaaaatattatagcataattgtcctgcttcagttattaatgggcgaaatttatttatgaacaatctttcttcagtggcctgtttgttgatgacctgggaaccaattttcttgccagaaactctatactatagttttgcaaggtagcataaggaaaaatttagaagcttcacatactggatggatttttttagtagttagcattttggttattggcagtcaaattttttttagtagaatggtaggaggatgggcttatatttggcacaattaattattcagaagatgttgtctcaatcttccattttactctactaaacttattccatatgttttcttaaatgttaaatacttaaaatgggactgcagtgggtctctgatggttgcttgatagccataaggaaaagagagacaaaaataatgaattcatgcagaggtttcagtcaattgcaaataatatgagattggtcgacttaaaattgaggatggtgtgatatgacgagcctctggtgatatgatcattttcctttttcatgtcaggattgacatctttggattgcataccagaattttccatgttcttcagctcgcaataattcatcttcaggtaatatgatggtagtctaggtttttagatgatttgcagcaaggagtgaaaataaattgatcagcactgcaacattgatatttcttatggtttgtcgctttagcaaccactctccttatttgcaagctcatgatgtgttgtaagatctagagttgtctagcgaaatcaaacctaacctcccccagtttactgttcgatgtggctgctacaattcttttactaaaagtatgtcaatttatttgttctatatcaggcttgtgtcgaggagaaagggaagcgaggaaaatttgtaggtgaagaaattgacagattgcaatgggcaccagttgtgctggtaattttcttgaaacctgacactataatttcaggttacactcttaatccaagccacaacaaatgtgagtggttttatatgttgaccatctgttatgagctctagaattttttttcatactgcacaggaatggatatcatgcttaatgaatactactgtgctgcagttttcctttctgttttggtgaatttagtaccatatatgcagcaggtcgtgatcagtttttgctacttttgcttgcagtcggtggaactgaacctggctctttctattcagatacagcggttcctgcgtgatcaatatctcaaatctcaatgaagataggcagattgctattccaggttggttctctgaatgtgtgcaagtttgcaatttgtatatcattggctgtatacggttgatataaatttgcagatcactggctgtatatggttgattacttgatatgagggtaactgggaaatccgtgataaggtgtgaaacatcccttttgatgcatttctgtagcactattgaagtaccaaggagtttttgtggccatatttatttatcaccattcaatgaataataactcttcctaatcagcgctaaattttttaacaaaatctgtaacagaattgttctgatttgaaacttagtaatctggtgtgatgcatattatatactaatgtaatgctgctggcggcgtgatgcccactcagtgtaggagttggagggtgtaggactggggttcgcattgccaatgagaggaggaagaccgcctccaagagccttgtccccatcctgtacatggccgtgatgatcgttgacatcgaccaggatctcttcagggtaagtagaacgacactaaaattaggattaacatttctaaacaccatgttatttcagaaattgattagttggaatcttgtattcattttgctagcctaagtgcctactgcctaacttaatggaaatatattggaaaagtttctccatggcagatcgaggctgctatttcctgtagatttaggtttcgctgtaaatactgaacaattgatgcaattttctatttgtattgagtacttgggtggttctttctatcaacc</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0407100, RefSeq:Os12g0407100