BGIOSGA011650

From RiceWiki
Revision as of 09:35, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA011650| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA011650, complete gene.| tag = OS03G01...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA011650

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA011650, complete gene.

LocusTag

OS03G0101100

Ensembl Transcript ID

BGIOSGA011650-TA

Ensembl Protein ID

BGIOSGA011650-PA

Length

3707

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:348892..352598

Sequence Coding Region

348892..348985,349102..349162,349312..349363,349491..349511,349599..349652
,350077..350127,350285..350347,350985..351050,351127..351165
,351430..351552,352188..352280,352374..352598

Genome Context

<gbrowseImage1> name=IndicaChromosome03:348892..352598 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:348892..352598 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCCGCTTATTCCCTCGTCTTCGTCTTCGTCGGCGTCGCCGTCTTCGTCCTCGCGCCACCAGCCTCCGCCGTGCCCTTCATCGTCCTGCACGGGATCGGAGACCAGTGCGCCAACCATGGTGTCGCCAAGTTCACCCGCCTTCTCGCCGACTGTGAAATCGGAAGTGGAACATGGGACTCTTGGTTAATGCCTCTTCAGAAACAGGCTGATATTGTTTGCAGTAAGGTAAAAGAAATGAAGGAACTCTCCAATGGTTACAATATAGTTGGTCTTTCACAGGGGAACCTGATTGGTCGAGCAGTTGTTGAGTTTTGTGATGATGGGCCACCGGTCAAGAATTTCATTTCACTCGGTGGCCCTCATGCTGGTACTGCTTCAGTGCCACTTTGTGGTTCTGGTATTTTTTGCATTCTTGCTGATTCCCTGATTAAAATGGAGATCTACTCAGACTATGTCCAGGCACATCTTGCACCTAGTGGTTACATGAAAATCCCAACTGATATTTCAGATTATTTAAAGGGTTGTAGATTTCTTCCAAAGCTTAACAATGAGTTACCAGGTGAAAGAAATGCCACCTACAAGGAAAGGTTTAGCAGCTTAGAGAATTTGGTATTAATCATGTTTCAGGATGACGCTGTCTTGATACCTCGGGAAACAGCATGGTTTGGTTACTATCCAGATGGAGGTTTCGATCCTGTCCTGCCCCCTCAGAAGACAAAGCTGTACATGGAGGACTGGATTGGTCTCAAGACGCTGGATGATGAGGGGAGAGTGAAATTCGTGTCCGTGCCAGGGGGGCACCTGGGTATTTCCAAGACTGACATGATGAAGTACATCGTGCCCTACTTGAAGGGAAAGGACAATGGAAAGGCTTGGATTGCTGCGACTTGGCGTGCCATCACCAACACCATCGGTGGGGAAGCGTTTGTGCTCAACTAG</cdnaseq>

Protein Sequence

<aaseq>MAAYSLVFVFVGVAVFVLAPPASAVPFIVLHGIGDQCANHGVAKFTRLLADCEIGSGTWDSWLMPLQKQADIVCSKVKEMKELSNGYNIVGLSQGNLIGRAVVEFCDDGPPVKNFISLGGPHAGTASVPLCGSGIFCILADSLIKMEIYSDYVQAHLAPSGYMKIPTDISDYLKGCRFLPKLNNELPGERNATYKERFSSLENLVLIMFQDDAVLIPRETAWFGYYPDGGFDPVLPPQKTKLYMEDWIGLKTLDDEGRVKFVSVPGGHLGISKTDMMKYIVPYLKGKDNGKAWIAATWRAITNTIGGEAFVLN</aaseq>

Gene Sequence

<dnaseqindica>1..94#211..271#421..472#600..620#708..761#1186..1236#1394..1456#2094..2159#2236..2274#2539..2661#3297..3389#3483..3707#ATGGCCGCTTATTCCCTCGTCTTCGTCTTCGTCGGCGTCGCCGTCTTCGTCCTCGCGCCACCAGCCTCCGCCGTGCCCTTCATCGTCCTGCACGGTTAGACTCAGTCACCCCGTCCGTCCCTTGGCTTCCAACACCTACTATTATGATGGAGTACTTCGGTTTGACAAGTAGCAGCTACTGATACTCCTCCTGCCGTGCCGTGCGTGCAGGGATCGGAGACCAGTGCGCCAACCATGGTGTCGCCAAGTTCACCCGCCTTCTCGCCGACTGGTCCGCCTCCCATGGCTACTGCCTGTACTACTACACTACACTACATCTCTCTTTCTTTCTTTTTCAGTTTCCTTCCCTTCTCAATTAGATTAATTAATTAATTAATTAATTACTTGTGCTACTGCCTGCTAATGATGGAAAACGCATAGTGAAATCGGAAGTGGAACATGGGACTCTTGGTTAATGCCTCTTCAGAAACAGGTCCACTACTTGACTTCTTCAATCTAGCTAGCCTAGGAATCTTGTTTACCTACTAGTACCAGTAATAAAAACAACTCTTTCTATATTCTTTCCACATAGTACTAATTTCTCCCTCATGTCTCAACAGGCTGATATTGTTTGCAGTAAGGTGATTCAACTTTCCCTTTTGGATAATACCTTCCTACGCTATGATGATGTATGTATCATCACTGGATTGTACCCTTTTCTTTTCCAGGTAAAAGAAATGAAGGAACTCTCCAATGGTTACAATATAGTTGGTCTTTCACAGGTATACTCTTGCACTGCTGTCTGTATTGTTTATGGTTCGCGCCACTTCCTTTTACCAACTGCAATGCTATGCAGCTGTTTTTTTTCCACCTGCTGTATATTCTCTAAGAACAGAGCACTAGTTACTCAAAACATTACAGGAAGAAAAATGATTCCATATCAATCGTTAATCTAATTTGCTCTCTGTTTTTGTATGCTCATTTTAATTCTCATTTCTATCACAAATTTGTTCAGGAAAAATGCTACACTTTTCATGTGACTAGTGGATTAGTTTGTTATAAGTCGTTGGTTATTACTGCCTCCAGGCACAAGTTAGTGACATATTGGGCATTGCATCTGTCCCCACTCCAAAAAGCAACTTCAGTCACTAACTTCTGTTTTAATGTATTCTCAAAACCTAGTAACCCCTTGTATCATATCCACAGGGGAACCTGATTGGTCGAGCAGTTGTTGAGTTTTGTGATGATGGGCCACCGGTGAGTTGTCCTTTCTGGGTACAAAGAACAGTTTTTTTTTTAGGTGTGTGTGTTTTTTAGGGGGTGTCCCCCTCTTGACTCCTTTTCTGCCCTCCTACCTTGAATCTACCATGTACTTGACGTTACAATGCTCTTCAATCTCGTGGTGCTTCAACAGGTCAAGAATTTCATTTCACTCGGTGGCCCTCATGCTGGTACTGCTTCAGTGCCACTTTGTGGTGTAAGTTCATCTCATTGTTTCCAAGTGATACCTAGTTTGTGATGAAAAGTTAAAATTTAATAATCCAAGATTGTGCATGGATCTTCTCAGATGACACATACACTCATTATCTATTAAAAGTACTTGGTACTGACAAGGTAGACTAACAACATCAGTATGTGGCATCTCTTATTTACCTGAATGCTATGACTGGTGAAATTCCACCATCACCACATCACAAATAATGTATGCCAACCTATATATATGGACATATATCCATCCACATGTTTGCTCCAAAATGGAAAGTTATTAGCATTGGTGGTGTGTAGGGATGGTAATGTGCATTTAGTCCATTTTTCCAATCTGATGCAGGCTTGCAGAGCTTGAAAACTGGTACTAGATCAGATATATCGTTTTTAGCATTTAGGTAACTCAACTTGATTCTTGAGGGACTTGGCATGATTAGGAGATATGATTGGTCACACAATGGGTGAGCTGCTAGGATCTTTAAGATTATGCCAAACCTTGTAATATTGTTACTGTTGTAAAGAATGTGAACTCTGCCTGGTTACAGTTATTTCACAAGAATACATGTGTGGTACCTTGATGTTAATTTTACTGCAGCTACCTATAATAGCTCATCTTTGTTTATTTGCAGTCTGGTATTTTTTGCATTCTTGCTGATTCCCTGATTAAAATGGAGATCTACTCAGACTATGTCCAGGTTCGTGTAGTCATTTGCACTTGAAAATACTTAGGTGGATTTTTTGTGGAATAATTTATTGAATGGTGAATTGCAGGCACATCTTGCACCTAGTGGTTACATGAAAATCCCAACTGTGAGTTTTTTATGACTTGAATTCTTTTTTGTCATCACCCTGAAGACATAATGCTTTTTATGTTGCTTGGTTGAAATTTTAATTTGATTTTTCAATTATTGCCTTGTAGTTACAAACTATCAGAAAAAAAATTATAAGTTAGTAAAATGATGAAAACACCGATCTTTCTTCAAGGCATGATAATTACTGGAAATAGAATTTGATGTGTATTTATGTTAATGTTTCGATTAACTGAAGTTTGCATAACCTTCCTATGCTTTTCAGGATATTTCAGATTATTTAAAGGGTTGTAGATTTCTTCCAAAGCTTAACAATGAGTTACCAGGTGAAAGAAATGCCACCTACAAGGAAAGGTTTAGCAGCTTAGAGAATTTGGTATTAATCATGGTAAGTTTAATATAGTCCAAGGTTGTATTTTGATTATGTTCATGTTCAACCTCCAAGACTGTTGGTAGCATCGGTTTATAAGCGTCAACAATTGTGTTCCTTAACTCCTTGGTATCTACTTAGGTTTATCCGATTTCTACTTGTATAGCGCCCTGACTGTTCTAGAATTCTGGAGCATATCACCAGGGTATAGTTGTATGGACCCATCAGCAGTACCCTGGTGGCAATAAGATAAGTTGGGTAGATTGTTGGCCGATGCTGATCCCCTGCTAACCTGTTTGCTACCTCTGTTCCATGGCTAAACTTGCTTCATATGTGGAGCTGGAGCTCATGCAGCAAGCCAGCAACTTGGAGTTGTTCATCATTGTGGTGTCACCGCATGTGTTGACCATTAGTTCTATATTAGATTAAGTTAATAAAATCTAATGAGTTTATGATATTATAACAGTGCTTTCGAAGAGAAATCTACACATAATATTTCATTTTAAACTAAGCATTTGGGAAATTATTGATGGTCCAATTTTTAAGAGTTTGACTAAATCTTGTCCTAAATGTAAAATATTTATGACCAGAGGGGGGTAATTTATTACTCATTAGTCTGCCTTTAGTGTGTTTATCCATTGTTTAATGTTTAGTTTCAGGATGACGCTGTCTTGATACCTCGGGAAACAGCATGGTTTGGTTACTATCCAGATGGAGGTTTCGATCCTGTCCTGCCCCCTCAGAAGGTTGAGCCTTGCATTGCATGTAGTGCAAATGGAATGAAGTAAATCCTCTGGCCTTAACATTGGTAGCAACATGTCCTGGTGTTGTGGTTGCAGACAAAGCTGTACATGGAGGACTGGATTGGTCTCAAGACGCTGGATGATGAGGGGAGAGTGAAATTCGTGTCCGTGCCAGGGGGGCACCTGGGTATTTCCAAGACTGACATGATGAAGTACATCGTGCCCTACTTGAAGGGAAAGGACAATGGAAAGGCTTGGATTGCTGCGACTTGGCGTGCCATCACCAACACCATCGGTGGGGAAGCGTTTGTGCTCAACTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA011650