BGIOSGA011701

From RiceWiki
Revision as of 09:36, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA011701| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA011701, complete gene.| tag = OS03G01...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA011701

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA011701, complete gene.

LocusTag

OS03G0113800

Ensembl Transcript ID

BGIOSGA011701-TA

Ensembl Protein ID

BGIOSGA011701-PA

Length

5406

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:1000232..1005637

Sequence Coding Region

1000232..1000515,1001563..1001682,1001777..1001846,1002026..1002136,1002361..1002444
,1003044..1003094,1003258..1003287,1003388..1003450,1003556..1003621
,1003722..1003838,1004278..1004313,1004709..1004828,1004966..1005136
,1005527..1005637

Genome Context

<gbrowseImage1> name=IndicaChromosome03:1000232..1005637 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:1000232..1005637 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGGATTCCGCGCGGCCGACGCCCGCTGACTCCGGGGAGCTCCCCAACGGCGCGGGGATGGCGGAGGATGCGGTGGTGGCGCCCGACGCGGCGGAGGCTCCGGAGGAGGGGGAGGAATCGGGAATTGCGAACGATTCGGAGACGAACGCGGCTCTGGGCGCAGAGGCCGCACCCCTCGCGGCCGCTCACCATGCGGGAGCTGCTTGGGGAGCTCAAGGACAGCGGGGAGCCCTCGTCGGGGAGATCCACGCTTTCGGAGGGCAATGGGATCGGATCTGCCGCCAGGACAGCCTACAGTTCTCATCCCATCATGATGTTGCCATGGACTTGATAAATAGTGTCACTGGAGTTGACGAGGAAGGTCGTTCTCGTCAACGCATTCTTTCCTTTGCTGCCAAAAGATATGTTAGTGCCATCGAAAGAAATCCGGAAGATCCAGATGCATACTATAATTGGGCCCTAGTCCTCCAGGAAAGTGCAGATAATGTGGATCCTGATTCTAGTTCTTCAAAAGATTCATTACTCGAGGAGGCTTGCAAAAAGTACGCTGAAGCTACACGACTCTGCCCAACGCTATATGATGCATATTACAACTGGGCTATTGCTATTGCTGATCGAGCCAAAATGCGTGGACGTACCAAAGAGGCTGAAGAACTCTGGAAGCAGGCTATAATGAATTATGACAAGGCAGTCCAGTTAAATTGGAACAGCCCCCAGGCCCTCAACAACTGGGGTTTGGGACTACAGGAGCTGAGCGCAATTGTTCCAGCCCGAGATAAACAAACAATCATAAAAACAGCTATAAGCAAGTTTCGATCTGCAATCCAGTTGCAATTTGATTTCCACCGGGCTATTTACAATCTTGGAACTGTCCTGTATGGGTTAGCAGAGGATACAATGAGGTCTGCAGGTCCAGATGTCTCTCCAAATGACTTGTACAGTCAGTCCGCCATTTATGTCGCAGCTGCTCATGCATTGAAGCCAAATTATTCAGTTTATCGCAGTGCTCTACGTCTGGTTCGATCAATGCTACCTTTACCATATCTAAAAGCTGGGTATCTAACTGCTCCTCCAGCAGACAACACCATTGCACCACATAAACATTGGGAAAGGTCAGAATTTGTCTTAAACCATGAGGGACTCCAGCAGGTCGATGCCTCTGAAAGCCCTTCTAGCAAACCCCTTGGACATATGGGGAGAAGCAAAAAATATATTAAAGTAGCTGTTGAAGATATCGTTTCAGTGTCTGCATGCTCCGATCTAACACTGCCACCTGGTGCTGGCCTTTGTATAGAAACAATTCACGGGCCTTTGTTCTTGGTTGCTGATACCTGGGAGTCTCTTGATGGTTGGTTAGATGCTATACGCCTAGTGTACACCATATTTGCACGAGGAAAAAGTGATGTATTGGCAGGTATCATTACTGGTTGA</cdnaseq>

Protein Sequence

<aaseq>MEDSARPTPADSGELPNGAGMAEDAVVAPDAAEAPEEGEESGIANDSETNAALGAEAAPLAAAHHAGAAWGAQGQRGALVGEIHAFGGQWDRICRQDSLQFSSHHDVAMDLINSVTGVDEEGRSRQRILSFAAKRYVSAIERNPEDPDAYYNWALVLQESADNVDPDSSSSKDSLLEEACKKYAEATRLCPTLYDAYYNWAIAIADRAKMRGRTKEAEELWKQAIMNYDKAVQLNWNSPQALNNWGLGLQELSAIVPARDKQTIIKTAISKFRSAIQLQFDFHRAIYNLGTVLYGLAEDTMRSAGPDVSPNDLYSQSAIYVAAAHALKPNYSVYRSALRLVRSMLPLPYLKAGYLTAPPADNTIAPHKHWERSEFVLNHEGLQQVDASESPSSKPLGHMGRSKKYIKVAVEDIVSVSACSDLTLPPGAGLCIETIHGPLFLVADTWESLDGWLDAIRLVYTIFARGKSDVLAGIITG</aaseq>

Gene Sequence

<dnaseqindica>1..284#1332..1451#1546..1615#1795..1905#2130..2213#2813..2863#3027..3056#3157..3219#3325..3390#3491..3607#4047..4082#4478..4597#4735..4905#5296..5406#ATGGAGGATTCCGCGCGGCCGACGCCCGCTGACTCCGGGGAGCTCCCCAACGGCGCGGGGATGGCGGAGGATGCGGTGGTGGCGCCCGACGCGGCGGAGGCTCCGGAGGAGGGGGAGGAATCGGGAATTGCGAACGATTCGGAGACGAACGCGGCTCTGGGCGCAGAGGCCGCACCCCTCGCGGCCGCTCACCATGCGGGAGCTGCTTGGGGAGCTCAAGGACAGCGGGGAGCCCTCGTCGGGGAGATCCACGCTTTCGGAGGGCAATGGGATCGGATCTGCCGGTGCGGAGCGCGCCAGGTCAGTTTCTATGCTCTCGCTTTGGGTTTCTACGAAGCTATTCGGATCTCGGGACTCGGGGGGGGGGGGGGGGGGGAAGAAGCCATTGGAGCTGTGCAGCTGCGTCTCAGCTTTCGCTGCTTGCTCAGCTGTACACCTTCCCTCAGATCTGCCATTTGCGTGAACTGCGTGGTGGTACATTTCGATAGTTTTTTTCGTCGAATTGTTTAGTGCTTGACATTTCGTAGGAAGGCGCTGGTGATCTGATTGGTTAGTGGCTTTGCTCGTCCTAATGGCTTCTAGATATGTCTGAGATTGCGTCAGTTATATTATTTTTCGAGCCAATTCAAGTCCCACGTAGTCTCTTCCAGGGGTTGTAATGCCGTATTCCTACTTCACCCCGTACCGATGAACTAGCTTACTGATCGTGTGAAGTTTTCAAGTTGCTACGTGCGGATCCATTTTTTAGGATGTGGCTAAAATAACATGCTGAATCAGATGACTGTTATTATTAGTCATTCAGCACTCTGATTTTTTTTAGCAAACCTAACATATCGTGGATGCTTGCATAGTGCAATAGTTGTGTCTGGTATGCAGGAAGGGGGAAAAAAACTAGTAAATTGTACCGTGCTTAGCTTCCCAATCGGATTCAGGGCTTGAGCACTAAAGGCTGTCTTGTCCTGTTTAACATTGGCTGTCGCGACAGTGCTAAACTCTGGAAAAACCATCTGGATTTCCCCCTGACCTGTACATGACAAATATTCCTACCAACTATATCCTAAGAGCCTGGTTTGTACTTAAATGTAAACACTTGCAGTTATCTAGTCAATAAATGTTTCATTTCAACAAGTCACCACCATGCAGTTTCGTGGGTTTTCATTATCAATATTATTATTTATATGATTATATCAACACTATTTTATTTGTTAGAATTGTTTTTTCTATTACCACTGATGAGATCGTAGATAGATTTTTTAATCCTCAATTCTCCAAATTATCTCGAAACTAGCTACCATGTTACGAATCGCAGCACTTTCTTTGGTCCATTTCAGCCAGGACAGCCTACAGTTCTCATCCCATCATGATGTTGCCATGGACTTGATAAATAGTGTCACTGGAGTTGACGAGGAAGGTCGTTCTCGTCAACGCATTCTTTCCTTTGCTGCCAAAAGGTTATTGTTTGTCTGACTTGATTAACTTAATCCTGTGCTGACGTTATGAACTTATAATTAGTTCACGATTGTGCTTTAAACATATGTTCTGCAGATATGTTAGTGCCATCGAAAGAAATCCGGAAGATCCAGATGCATACTATAATTGGGCCCTAGTCCTCCAGGTAGAACTGTGTTCCTTATAGAAGTACGTAACAGCTGTTGTGTTGATTGAATAGAACGCTGCATTACTTCATTCTGTTCCTTAAACCATGTAGACAAAACAGAATTGCTGATAAAAAGAATGTAGAAGGGTTCTGCAATACTAATATCTTGTAATTCTAATCACTAGTTATAATTTCAGGAAAGTGCAGATAATGTGGATCCTGATTCTAGTTCTTCAAAAGATTCATTACTCGAGGAGGCTTGCAAAAAGTACGCTGAAGCTACACGACTCTGCCCAACGCTATATGATGTAGGTTTGTTTATTGTAATTTCACTACTATGAGTTGCTAGACTGGATTAGAGATTATATTTTGTTTTTCCATAAAGCACTGTGCCAAATGGCCCAAATTGGTACTCTATGGGCACTCTGAGAATTCTTAATTTTGACTAAGCTGTCATTTGTGAATAATTTTCTGCTTGAGAATAATTTGTTTGACCAAACTTACACCTCATTCCTCTCTTTAATCATTTTAGGCATATTACAACTGGGCTATTGCTATTGCTGATCGAGCCAAAATGCGTGGACGTACCAAAGAGGCTGAAGAACTCTGGAAGCAGGTCATAAACAATGTTAATAGTTGCGCATGTATTTCACAAAGACTAATCTTTCTTTCTTTTGCTAGTATCCAAAGGAAAATTGCTTTCTAATCTTTTCTGCACTTCTAGAATTTAATTTCTCATAAAGTGATTCAATTCCCAATATGCAATAGTTACATTGTTAAGCTTGTGAAAATTGAACAATTTGAATTGCAAACCCAAATGTGAGCTGATGAAATAGGAATATGCCTGCATTTGTTGAAGTGTTTTGGTTCAAGTATGGTTTGTAAAATGGTTGTCTTCTTTTGCTGTCATTGACATGTAAACTAGTAATACTGTCCACGGTAAATAGTGGGCGTGCAATTCTTAGCACTCTAGCAGCACTGAACCAAACATAATATCTGATTTCTTTTTCTATCATTGTTCCTTTTGGTTAGATAGTATATTTTATTGAGAGTAAGGATTTATTATAATTTGGTTAGCCTGACTTACATTTACTTTGGAAAAAATGCCTTGAAGTTATTTACTTGAATTTTATGGATAATACTTTATTATATTGTTTTCAACTTGTTGGGGATCATGTCTTACTAATTGATCGTTTCTGTCTATTTCTTCTACAGGCTATAATGAATTATGACAAGGCAGTCCAGTTAAATTGGAACAGCCCCCAGGTTAGGATGGTCTCAATTGGCTGATTTAATGGGCAAGATAACTAATACTCAATTGAACGTTTGTTAGACCTTTGCATCCAAATCCCATTATCTTGTGTGCTTGCCTTTTATTTTTCATCAATCATCATTTTGATTGATTTCATTTGTCACTATTCTACTGCAGGCCCTCAACAACTGGGGTTTGGGACTACAGGTACATGACTTTGTGACTTTGTTACTTATGTCTGACTTAACATATCTTCGTAATCACACTGATTTTCATTCATTGTCAATATTATTATCTTATAATGTAGGAGCTGAGCGCAATTGTTCCAGCCCGAGATAAACAAACAATCATAAAAACAGCTATAAGCAAGGTAGTTATATGGTACCTCCTAATTATGTCAGGGAAATTACTTCTGAGCAAATGTATCTACAAGAAAATTCTGAAACTCAAAACCTGTATTTTTTTTCTGTTGCAGTTTCGATCTGCAATCCAGTTGCAATTTGATTTCCACCGGGCTATTTACAATCTTGGAACTGTCCTGGTATGTTTTTTTACAGCACTTTGTCAATATTCGTACATGCTAGCTGACTGCATTTTTTGCTAACAACAATTCACCAACTTTCATATATTTGATGTCACAGTATGGGTTAGCAGAGGATACAATGAGGTCTGCAGGTCCAGATGTCTCTCCAAATGACTTGTACAGTCAGTCCGCCATTTATGTCGCAGCTGCTCATGCATTGAAGCCAAATTATTCAGTATGTGTTTTTCCTCTCTTTGACTACTCTGCCTTTAAATTTCCTTATTGGGATGCGCTGGAAGGTAGAGATGTGAAAACAAAGCAAGAAGAGTTTCATAGTCAGTCAGTCATTGTATTCTTCCTGCTTAACTGAAGTCACTGAAGTGATATTTTAATTCAACAAATACGATTCAGTATTGTAGAAACGTTTGTTAATTCAGCAATATTTTTCTCTTTCCTGTATGTATATTCTGCTAGCTTTCAGCAGTTTGTGGGTTTTGATATTATCTTATAGTAGCATTTCCATGTTACTTGGATGAGTGAACTGACTATTTTGGCAGAGTTAGCATTTTATGCCTCGCATCATGACGTGGTTATAAGCTTGAAATTCCATAGGACATTTCATGAATCTTTAGGCGTTATGTAGATGTACTGAAATGTTGTTGTGGATAATGCAGGTTTATCGCAGTGCTCTACGTCTGGTTCGATCAATGGTATGTTAGCATGCTCTATGCTTTCAGTATTTCTTTGTTTGAAGTTTGTCTTTAAGCAATTCATCTCCTGTATTGGACTTCGTTTTTTAAATGTAATTGGTTTTTTTATTGAGTACAAATGATGATTCACAAGGAAACAAAATCGTATATTGAAATGCACCGGAACAATTAATATGATCGAGAAAATTAGGGTAAAGATTGTGAACTTGTGTGTCCTCAGTGTTTAAGTGATATGTATATATGTCCTAGTTTTATCACTAGCTTGGTTTTTTATCATTTTTATTTTATCTCGTTTTGAATTTTCAGCAACTATTCAATTATTCATACACCAGGTAATCTGCATGTCTTAAATTATTCTGTGGTTGGCATACTTATTGTTATGCTATGCTTTGCAGCTACCTTTACCATATCTAAAAGCTGGGTATCTAACTGCTCCTCCAGCAGACAACACCATTGCACCACATAAACATTGGGAAAGGTCAGAATTTGTCTTAAACCATGAGGGACTCCAGCAGGTAAGTTCTTCTACTTTAACATGAGCATACTTCTAGAGTACCTGGAGTTTTCAGACGGTTTCTTTTAGCCGGAGATGTTTCTATCCATGTGCATTTCACCAGGATTTGAGTCTCATTATTTTTGTTGCAAATGTTAGGTCGATGCCTCTGAAAGCCCTTCTAGCAAACCCCTTGGACATATGGGGAGAAGCAAAAAATATATTAAAGTAGCTGTTGAAGATATCGTTTCAGTGTCTGCATGCTCCGATCTAACACTGCCACCTGGTGCTGGCCTTTGTATAGAAACAATTCACGGGCCTTTGTTCTTGGTAAGTACATACTCATTTGATGCTTGTTGTTCAGGAGTTAAGTTTACATGTAGGGCCTGTTTGGCACAGCTCCAACTTCTAAATATAACTCTAGAAGTTGAATCTGGAGTGGAGTTGTGGAGCTGCCTAAACTCAGCTCCACAACTTTAGTACATTTTGTGAGAGAGCTTCACCCAACTCCACTCCTAGTTTTGGTGGAGCTAAAACTGTTTGGCTGAGCTTCAGCTCCAGGAGGGGTGGAGTTGGAGCTGGAGCTGTGCCAAACAGGCCCGTACTGTACCGCCTTCTTGACATTTCAGGGCACTGTTTATTCTTGTTGCTCCTCCCTAGGCCCTCCCTCTGTCATTATCACCTCAATTCTCAGCCTGTGATTTTTAACTCGTTTTTCAGGTTGCTGATACCTGGGAGTCTCTTGATGGTTGGTTAGATGCTATACGCCTAGTGTACACCATATTTGCACGAGGAAAAAGTGATGTATTGGCAGGTATCATTACTGGTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA011701