BGIOSGA011703

From RiceWiki
Revision as of 09:36, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA011703| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA011703, complete gene.| tag = OS03G01...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA011703

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA011703, complete gene.

LocusTag

OS03G0114000

Ensembl Transcript ID

BGIOSGA011703-TA

Ensembl Protein ID

BGIOSGA011703-PA

Length

5881

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:1014690..1020570

Sequence Coding Region

1014690..1014867,1015713..1016029,1016102..1016273,1016353..1016426,1016498..1016675
,1016757..1016866,1016962..1017061,1017143..1017229,1017343..1017519
,1017685..1017958,1018039..1018200,1018288..1018503,1018582..1018619
,1018777..1018940,1019052..1019177,1019253..1019378,1019480..1019533
,1019627..1019689,1019762..1019824,1019917..1019979,1020070..1020570

Genome Context

<gbrowseImage1> name=IndicaChromosome03:1014690..1020570 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:1014690..1020570 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGACTTCTCGTGGACCACGGGCTGGGAGAAGGCGGCCGCCGACGACGATGAGGCGGAGTCGGCGCCCGCGCCCGCACCGCCGGCCCCTTCGCCGCAGGAGGCGGCGGAGTCCATGATCCTGGTGCCCGGGCCACGCGTGGTTCTGTCCGGGCTGATGCGGGGCGACTGCCGTGCAGATGACTCTGTTCTGTTCATTAATGCCGGTGGCAGTGCAACTGAAGGTTGTGAACCCTCTTCAAAGCTTTCTGAGGATTCTTTCTTTGAAGGAGGGGATGCAATAGAGACATCTGAGGATATAGTTGAAGGTGGTGACTATCCTTCACTTTACCACTCAGCTCGATATGGAAATTTCAGCTACAAAATCGATGGTCTTGCTCCTGGAGACTATTTCTTAGATCTGCATTTTGCTGAGATAGTGAACACTTATGGGCCAAAAGGAATTAGAGCATTTGATGTACTTGTGCAAGAAGAAAAGGCAAACACACTGACTCATATTTTGTCTGAACTTGATGTGTACGCGGTGGTTGGAGGTAACAGACCCCTTCAGGTGCGTGATATTAGAGTGACAGTTGAGAGTGACGGTGCCATTGTCATAAACTTCAAAGGAGTAAGGGGAAGTCCCATGGTTTGTGGCATCTGTATTCGAAAAAGGGTAGCAATGGCAGTGACAGACATGGTTACAGAAGGGAATGTCTTATGCAAAAGATGTTCAGCTCATACAGGGAATTCACCTTTACAGACCAGGACAAGTAAATTAGTCTCAAAGTATGAGAAACAGATTGAGGAGCTAACCAACCAGTGCAACATGAAGTCTGATGAATGTTATATGGCGTGGTCTTCAGTGGAATCTACCAATCAGGAGCTTGAGAGACTTAAGATAGAGCTTCATCAGAAGGTCATGCAAAGTGATAATATTGAACAAGTCGTTGATAGACAAGCTGATCAACTGAGAAGTGTTTCCCAGAAGTATGAAAATGCCAAGAAATTATGGGCAGCTGCCATATCTAACTTGGAAAATAAAATCAAGGCTATGAAACAAGAGCAAACACTGTTATCTCTTGAAGCACATGACTGTGCAAACGCTGTTCCTGATCTGAGTAAGATGATAGGAGCTGTTCAAACATTAGTTGCACAGTGTGAAGATCTTAAACTGAAGTACTATGAAGAGATGGCCAAGAGAAAGAAACTTCATAATATTGTTGAGGAGACCAAAGGAAATATCAGGGTTTTCTGTCGTTGCCGCCCATTAAGTAAAGATGAGACATCATCAGGTTACAAATGTGCAGTGGATTTTGATGGAGCAAAAGATGGAGACATTGCTATTGTGAACGGTGGAGCAGCTAAGAAGACATTCAAGTTTGACAGAGTCTACATGCCGACAGACAATCAAGCTGATGTGTATGCCGATGCATCTCCACTGGTTACTTCGGTCTTGGATGGCTACAATGTGTGCATATTTGCGTACGGACAAACAGGAACAGGGAAGACTTTTACCATGGAAGGAACTGAGAGGAACAGGGGAGTAAATTATAGAACTCTGGAGGAGTTGTTCAAAATCGCAGAAGAGAGAAAAGAGACTGTCACATACAGCATTTCTGTCAGCGTGCTTGAGGTCTACAATGAGCAAATCAGAGACCTGCTTGCATCATCCCCTTCGTCTAAGAAGTTGGAAATCAAACAGGCAAGTGAAGGGTCCCATCATGTCCCTGGCATTGTGGAGGCCAAAGTTGAGAACATCAAGGAGGTTTGGGATGTCTTGCAAGCTGGAAGCAATGCAAGGGCTGTAGGATCAAACAATGTGAATGAGCACAGCAGTCGCTCCCACTGTATGCTTTGCATCATGGTGAGAGCGGAGAACCTGATGAATGGAGAATGTACAAGAAGTAAGCTTTGGCTTGTAGATTTGGCTGGAAGTGAACGATTAGCTAAGACCGATGTGCAAGGTGAAAGGCTTAAGGAAGCACAAAACATTAACAGATCACTTTCTGCTTTGGGTGATGTGATTTCAGCTCTTGCAACGAAAAATTCCCACATTCCCTACAGGAATTCAAAGTTGACGCACTTGCTGCAAGATTCTCTAGGAGGGGACTCAAAAGCTTTAATGTTTGTGCAAATTAGCCCATCCAACAACGATGTGTCAGAAACTTTGAGCTCATTGAACTTTGCAAGTCGTGTTCGTCGTATAGAATTGGGTCCAGCAAAGAAGCAGGTTGACACTGCAGAACTTCAAAAGGTCAAACAGATGCTTGAAAGGGCTAAACAGGATATCAGACTTAAGGATGATTCCTTGAGAAAGCTGGAAGATAACTGCCAAAATCTAGAGAACAAAGCCAAAGGGAAAGAACAATTCTACAAAAATTTACAAGAAAAGGTAAAAGAGCTTGAAAGCCAGCTGGATTCTAAGATGCATTCTCAAATTACATCAGAGAAACAGCAGAATGAGCTTTTTGGGAAACTCAAGGAGAAAGAAGAAATGTGTACTACCCTTCAGCAGAAGATAGCGGAGGAATCAGAGCATAAACTTAGACTCCAGCAGCAATCAGAATCTGAGATAAAGGAGCTGGAGCTCAAGTTGAAGGAACAAGAACACCATCGATCAGTTGCAGAATCTAAGATAAAGGAGCTGGAGCTCAAGTTGAAGGAACAAGAACACCATCGATCAGTTGCAGAATCTAAGGCAATGGAAATAGGACAGGAGCTCCTGGAAACACAGAGAACAGAGGCTATGCTTCAGATCAAGCCAAGAGATCTTGAGAATAACTTGCAAGAAAGGACAACACTTCAGGACACAAACATGATACTTGACTCGACCAACTGTATGAGAGTTGCTAGTACTCCTGGAGAGGCAAAGGCGCACCTCTTGACAAGAGAGGAAGCAATGAGCGAGAAGGAGCAGCACATTCTGAGAAGCTCAGATTCTATGAACAAGAAAGTCACCAACAATTCTTCCATTGTTGGGGCTCCAGAAGTTGTCAATGAGAAGAAGAGGAAAGGAGATGCAAGGAATTCATCGATTGGTGGGGAATTGGAGAACCAGCCTGTTGGAAGCCAGAATGCTTCAAGGAAGAGGAGCCTGCAAGGTGAGCCAAGGCTGAAGAGAAAATCGACCGAGCCGCTGAAGAACCCAGGACGGGTGACGGCAACTTCAAAGACGGCCGCTGCCACACACAAGACGGGTCCTGTTACCAGAGCCACAAGGCAGCAACCAGCCGTGAACAAGACGAGAGGTTGGGTCAGGTAG</cdnaseq>

Protein Sequence

<aaseq>MDFSWTTGWEKAAADDDEAESAPAPAPPAPSPQEAAESMILVPGPRVVLSGLMRGDCRADDSVLFINAGGSATEGCEPSSKLSEDSFFEGGDAIETSEDIVEGGDYPSLYHSARYGNFSYKIDGLAPGDYFLDLHFAEIVNTYGPKGIRAFDVLVQEEKANTLTHILSELDVYAVVGGNRPLQVRDIRVTVESDGAIVINFKGVRGSPMVCGICIRKRVAMAVTDMVTEGNVLCKRCSAHTGNSPLQTRTSKLVSKYEKQIEELTNQCNMKSDECYMAWSSVESTNQELERLKIELHQKVMQSDNIEQVVDRQADQLRSVSQKYENAKKLWAAAISNLENKIKAMKQEQTLLSLEAHDCANAVPDLSKMIGAVQTLVAQCEDLKLKYYEEMAKRKKLHNIVEETKGNIRVFCRCRPLSKDETSSGYKCAVDFDGAKDGDIAIVNGGAAKKTFKFDRVYMPTDNQADVYADASPLVTSVLDGYNVCIFAYGQTGTGKTFTMEGTERNRGVNYRTLEELFKIAEERKETVTYSISVSVLEVYNEQIRDLLASSPSSKKLEIKQASEGSHHVPGIVEAKVENIKEVWDVLQAGSNARAVGSNNVNEHSSRSHCMLCIMVRAENLMNGECTRSKLWLVDLAGSERLAKTDVQGERLKEAQNINRSLSALGDVISALATKNSHIPYRNSKLTHLLQDSLGGDSKALMFVQISPSNNDVSETLSSLNFASRVRRIELGPAKKQVDTAELQKVKQMLERAKQDIRLKDDSLRKLEDNCQNLENKAKGKEQFYKNLQEKVKELESQLDSKMHSQITSEKQQNELFGKLKEKEEMCTTLQQKIAEESEHKLRLQQQSESEIKELELKLKEQEHHRSVAESKIKELELKLKEQEHHRSVAESKAMEIGQELLETQRTEAMLQIKPRDLENNLQERTTLQDTNMILDSTNCMRVASTPGEAKAHLLTREEAMSEKEQHILRSSDSMNKKVTNNSSIVGAPEVVNEKKRKGDARNSSIGGELENQPVGSQNASRKRSLQGEPRLKRKSTEPLKNPGRVTATSKTAAATHKTGPVTRATRQQPAVNKTRGWVR</aaseq>

Gene Sequence

<dnaseqindica>1..178#1024..1340#1413..1584#1664..1737#1809..1986#2068..2177#2273..2372#2454..2540#2654..2830#2996..3269#3350..3511#3599..3814#3893..3930#4088..4251#4363..4488#4564..4689#4791..4844#4938..5000#5073..5135#5228..5290#5381..5881#ATGGACTTCTCGTGGACCACGGGCTGGGAGAAGGCGGCCGCCGACGACGATGAGGCGGAGTCGGCGCCCGCGCCCGCACCGCCGGCCCCTTCGCCGCAGGAGGCGGCGGAGTCCATGATCCTGGTGCCCGGGCCACGCGTGGTTCTGTCCGGGCTGATGCGGGGCGACTGCCGTGCAGGTGGTTTTTTCCCCCTTTGGTTTGTGATTAGATTTCCAGGGTGCAGATCTTGTGCTTAGGTTTCTCTCAACTCCGCGTGGGGGTTCTTGGGATATGAGCGTATAGGATGGTCGAATTAGAGTACTCGATTTGGCTCGGGCAGAAAACCCTAGAAAGTATGCTTCCAAATTTGCTCTTATTTTTTCTTGTGTGTGTGCACGTGTGCGTGTGGAGGAGGAAATTTAGGAGGCTGGATGTGCCCAGATTTGGGATTTTCTGGTGTGTTACCTGTGTTGGTATCAAAGTTGCAATCCCAATTTTGAGGCCTTCAGGTGTTGTGCTGTGCTAGGAGCTTAATAAGGTTCTCCATGTAACAGGAATCAGCTATGTGTGGAATCATTCACATAATGCTCTAGTTTTTGTGCGTCGATTTAGGCTCTTTGGAGTATATTTGAATATTTGATAGAGTACTGTTTCTCTGCTTAAAATTGTGGGTTCTTCATTGACTTGATTCTCTGCCATGTTAGCCTATTTTCAAGTGGATCAGTGTGCTGGCCACATTTGATACTCTCAGAGTGAATGAATAATACATCATGTAGTACTAAAGTCATGGGCATTGGATTGGTTGAAGAAAATAAGATTGTTTCTATGTCAGAGTACAAGGTTGCATCGACTGTGGTGCTGTAGTAATATCAAGTAGAAGGGGCTTCGATAGCCATCATCAGTCATGTGCTTTCAAAATGGATATTTCATAATCTTGAATTCTAAATTGAAAATTGGAAGTACCTTGTCGAAATGTTAATTGGTCATGTCATCGTAGTTCCACAGTGCTTCTTATTATCCTTCTTGTGCCTGTGATGAAACAGATGACTCTGTTCTGTTCATTAATGCCGGTGGCAGTGCAACTGAAGGTTGTGAACCCTCTTCAAAGCTTTCTGAGGATTCTTTCTTTGAAGGAGGGGATGCAATAGAGACATCTGAGGATATAGTTGAAGGTGGTGACTATCCTTCACTTTACCACTCAGCTCGATATGGAAATTTCAGCTACAAAATCGATGGTCTTGCTCCTGGAGACTATTTCTTAGATCTGCATTTTGCTGAGATAGTGAACACTTATGGGCCAAAAGGAATTAGAGCATTTGATGTACTTGTGCAAGAAGAAAAGGCAAACACACTGACTCATGTGACTCTTAGTTTTGTATCACGATTTATTTTCATGTCTAGCTAAACAATTTGACTTTTGATTGATGTGCAGATTTTGTCTGAACTTGATGTGTACGCGGTGGTTGGAGGTAACAGACCCCTTCAGGTGCGTGATATTAGAGTGACAGTTGAGAGTGACGGTGCCATTGTCATAAACTTCAAAGGAGTAAGGGGAAGTCCCATGGTTTGTGGCATCTGTATTCGAAAAAGGGTAGCAATGGCAGGTAAGACATTGATATTAGATGCAACTTGCTCCTTCAAGGTCTAATTTTCAGCATGATAACCTTAATCATGAACTTGCAGTGACAGACATGGTTACAGAAGGGAATGTCTTATGCAAAAGATGTTCAGCTCATACAGGGAATTCACCTTTACAGGTCAGTATTTTCACAAACAGTTACAGAATCATATTTGGTGTAATACTGATACATATCAATCTACAATGCAGACCAGGACAAGTAAATTAGTCTCAAAGTATGAGAAACAGATTGAGGAGCTAACCAACCAGTGCAACATGAAGTCTGATGAATGTTATATGGCGTGGTCTTCAGTGGAATCTACCAATCAGGAGCTTGAGAGACTTAAGATAGAGCTTCATCAGAAGGTCATGCAAAGTGATAATATTGGTATGAACTAAGCTATCAGGATAATCAACTTTGTTTCCTAAATGTTTATATATGCTCACCGCTGTTCTACATTCCTGACAGAACAAGTCGTTGATAGACAAGCTGATCAACTGAGAAGTGTTTCCCAGAAGTATGAAAATGCCAAGAAATTATGGGCAGCTGCCATATCTAACTTGGAAAATAAAATCAAGGTAAAAGCAGATTTACTGTCTGCAATGCTACAACAAGAATTGATAAATACAATACGTGCCAAGTTTTACTGATTATATCACTTATTAATTTTCAGGCTATGAAACAAGAGCAAACACTGTTATCTCTTGAAGCACATGACTGTGCAAACGCTGTTCCTGATCTGAGTAAGATGATAGGAGCTGTTCAAACATTAGGTAATATCCATCAGTTGCATTGTTGTAAAGGTTTCAGAGCATTTAATGAAAAAGTTTGTAAGCATTTTTTTTCTGCTGCAGTTGCACAGTGTGAAGATCTTAAACTGAAGTACTATGAAGAGATGGCCAAGAGAAAGAAACTTCATAATATTGTTGAGGAGACCAAAGGTGCCTGCCTCTTCTGATCTTCTCCTCTGTATTATGGTGCTTTCACATTTTTTTTCTAGTCTGCCATATATAATTATTTTCTTTCTACTGACTGGCTGTACATGCCATTCCAGGAAATATCAGGGTTTTCTGTCGTTGCCGCCCATTAAGTAAAGATGAGACATCATCAGGTTACAAATGTGCAGTGGATTTTGATGGAGCAAAAGATGGAGACATTGCTATTGTGAACGGTGGAGCAGCTAAGAAGACATTCAAGTTTGACAGAGTCTACATGCCGACAGACAATCAAGGTATTTCTAACTATGCTGGAGTTTCTATTGGGCCTCTTTGTCCTTTACAGTTCTTGTGTTTTTTTAGACATGAAAGATCAAAATGGTAGCTCTATAATGTGCAGCTAGTAATTAAAGCAATGGTGCATTATAACATCTAATCTGTAAATTTCCAATAATGTGCAGCTGATGTGTATGCCGATGCATCTCCACTGGTTACTTCGGTCTTGGATGGCTACAATGTGTGCATATTTGCGTACGGACAAACAGGAACAGGGAAGACTTTTACCATGGAAGGAACTGAGAGGAACAGGGGAGTAAATTATAGAACTCTGGAGGAGTTGTTCAAAATCGCAGAAGAGAGAAAAGAGACTGTCACATACAGCATTTCTGTCAGCGTGCTTGAGGTCTACAATGAGCAAATCAGAGACCTGCTTGCATCATCCCCTTCGTCTAAGAAGTATGACCGTTTCTTTTAGGATCTGTGCTGGGTTCCATAATATTGCCATCCTGTGATAACTTGTAATCTTGGTATTTTAGGTTGGAAATCAAACAGGCAAGTGAAGGGTCCCATCATGTCCCTGGCATTGTGGAGGCCAAAGTTGAGAACATCAAGGAGGTTTGGGATGTCTTGCAAGCTGGAAGCAATGCAAGGGCTGTAGGATCAAACAATGTGAATGAGCACAGCAGTCGCTCCCACTGGTTGGTCAAAATTTTATTATTATTCTTTTCTTTTCCAGAGTACTTGCTTCTGGTCAAAATGTTTTGACCTTTATATCTGTACCTCAGTATGCTTTGCATCATGGTGAGAGCGGAGAACCTGATGAATGGAGAATGTACAAGAAGTAAGCTTTGGCTTGTAGATTTGGCTGGAAGTGAACGATTAGCTAAGACCGATGTGCAAGGTGAAAGGCTTAAGGAAGCACAAAACATTAACAGATCACTTTCTGCTTTGGGTGATGTGATTTCAGCTCTTGCAACGAAAAATTCCCACATTCCCTACAGGTTTGTGGTCTTCATAAAGGAATATTGTTTAACCCATCAGTTTATGTTTCTCACTGTTTATATTCCTTTTCTGGGCAGGAATTCAAAGTTGACGCACTTGCTGCAAGATTCTCTAGGTAACCTGACCTGTTCTTCTGGAAGAGAACCATCTTCATAATTTATCACTTCAATATTTCCAATCTTCTATGTATTTTTTGAGCAATTATCGTGTGTGTCTTTCACTTAGCTACATCATTAATTTGCTCTTTTGGTGCTTCTTCATACTGATAATAGGAGGGGACTCAAAAGCTTTAATGTTTGTGCAAATTAGCCCATCCAACAACGATGTGTCAGAAACTTTGAGCTCATTGAACTTTGCAAGTCGTGTTCGTCGTATAGAATTGGGTCCAGCAAAGAAGCAGGTTGACACTGCAGAACTTCAAAAGGTCAAACAGATGGTAAGTGTCAATAATACTGCCTTTCCTTTCAAGCTGGCTATCTGAACCTCCTTGAAACTGAGCCAATGACATAAACTCCTCCACACTTTTCCTTCTGTGAATGTATGCCAGCTTGAAAGGGCTAAACAGGATATCAGACTTAAGGATGATTCCTTGAGAAAGCTGGAAGATAACTGCCAAAATCTAGAGAACAAAGCCAAAGGGAAAGAACAATTCTACAAAAATTTACAAGAAAAGGTACATATAGTTCAGGGCAACACTTCAATCGTTGTTCTTCATATGTACTTGACTACATTTTTGTAATCGATATAGGTAAAAGAGCTTGAAAGCCAGCTGGATTCTAAGATGCATTCTCAAATTACATCAGAGAAACAGCAGAATGAGCTTTTTGGGAAACTCAAGGAGAAAGAAGAAATGTGTACTACCCTTCAGCAGAAGGTATTGATCAAAAGTGGTTATTACTGTTGCCTGTTAGTAGCTACTGTAGTGCACAGGGTACTAAACTCTAGACATATACCCATTCTTTTTTTATTTTCCAGATAGCGGAGGAATCAGAGCATAAACTTAGACTCCAGCAGCAATCAGAATCTGAGGTTGCAGTTCAAATTTAACATTAAACTGTTAGTGGCTATTAATTGAAAAGGTCCAGGTTTGGATTGGCTTTATTGTTATATTATTATTTTCAGATAAAGGAGCTGGAGCTCAAGTTGAAGGAACAAGAACACCATCGATCAGTTGCAGAATCTAAGGTGATTTGTAACATGTGGCTAGTGTCTCTGACCCTAATATACATAGCTTTATTGTTATATTATTATTTTCAGATAAAGGAGCTGGAGCTCAAGTTGAAGGAACAAGAACACCATCGATCAGTTGCAGAATCTAAGGTGATTTGTAACATGTGGCTAGTGTCTCTGACCCTAATATACATATTTCCTAACCTACCTGACACTTGTATCATCCTGAATTTTTTTTGTAGGCAATGGAAATAGGACAGGAGCTCCTGGAAACACAGAGAACAGAGGCTATGCTTCAGATCAAGGTAAGCTCTTTTCTCAGAACTGCTACATTGTGCCCATTCTTACAGTAAAGGGGTGAAAATAATGTGGACTTTAACCTCTCCACATTTCAGCCAAGAGATCTTGAGAATAACTTGCAAGAAAGGACAACACTTCAGGACACAAACATGATACTTGACTCGACCAACTGTATGAGAGTTGCTAGTACTCCTGGAGAGGCAAAGGCGCACCTCTTGACAAGAGAGGAAGCAATGAGCGAGAAGGAGCAGCACATTCTGAGAAGCTCAGATTCTATGAACAAGAAAGTCACCAACAATTCTTCCATTGTTGGGGCTCCAGAAGTTGTCAATGAGAAGAAGAGGAAAGGAGATGCAAGGAATTCATCGATTGGTGGGGAATTGGAGAACCAGCCTGTTGGAAGCCAGAATGCTTCAAGGAAGAGGAGCCTGCAAGGTGAGCCAAGGCTGAAGAGAAAATCGACCGAGCCGCTGAAGAACCCAGGACGGGTGACGGCAACTTCAAAGACGGCCGCTGCCACACACAAGACGGGTCCTGTTACCAGAGCCACAAGGCAGCAACCAGCCGTGAACAAGACGAGAGGTTGGGTCAGGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA011703