BGIOSGA011709

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Revision as of 09:36, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA011709| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA011709, complete gene.| tag = OS03G01...")
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Gene Name

BGIOSGA011709

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA011709, complete gene.

LocusTag

OS03G0115400

Ensembl Transcript ID

BGIOSGA011709-TA

Ensembl Protein ID

BGIOSGA011709-PA

Length

3815

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:1096391..1100205

Sequence Coding Region

1096391..1097554,1097647..1097737,1097828..1097985,1098082..1098133,1099275..1099354
,1099442..1099535,1099613..1100205

Genome Context

<gbrowseImage1> name=IndicaChromosome03:1096391..1100205 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:1096391..1100205 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGCGGCCCCGCTTCGAGGAGGATGACGAGGATGAGTTCTTTGACTCGAGGGAGGTCATGTCGCCGGCGTCCGTCTCTTCTCCGGCGAGCTCCGGGCGCTACGACGGCCCCATGCTCGAGGTGTGGGCCACCGACCCGTGCAGCGTCCATGAGCGCCGTCAGAGGTTCATCAAGTCCTTGGGCCTCTCGGATTCGAGCCCCTCCGCCGGCGGCGGCGGCGACCGGCCCGACGAGGAGCCGTGCTCGAGGTCCAGTGCCGCAGAAGAGATCCTCCCGTGCAGCCCCACCGTCGAGCTGGTCTCAGCCGTCCCCAGTTTTGCGTGCAGAGGCGAGGAGCCGGGAGCGTCAGGCGGCGGCGGCGGCGCGGAGGTGTTGGATTGTGTATTCAAGAACTTGGACGATGGTACAGTGTTTGTCGTCGATGAGATGGGAAAAGATGGGAGTTTCAGGAGCCTCAGGGACAGGCGATCCAACCGGACAGTTACTGCAGCGGAATTCGAACGGACCTACGGCTCGTCCCCATTCATCTGTGAGCTGATGCGGCGGGTGGATGATTCGGATGAGTCCTCTGCTGTGGAGAAGGCTCTGGTCAGGGGAAGGAGAAGGAGGAGGAGATTTGGATGGCTGCGCAGGCTCGGCATCCGTGGCTGCGTCGTCGATGTGGAGGAGGACGATGAGACGAATTCAACATCCTCGAGTTCTTGTCGGAGTTGCTCTGGGAAGGTTGATAGGGTCAAGGTGAGGCATTACAAGAAGAGGTCAAAGGAATTGTCCGCGGTGTACAGGGGCCAAGACATCAAGGCGCACGAAGGCGCAATTGTGACCATGAAGTTTAGCTCTGATGGACAGTATCTGGCCACTGGAGGTGAGGATGGGGTTGTGCGTGTGTGGCGGGTGGTGGAGGGGGAGAGGCCCAATGAACTTGACTTTGCCGAGGATGATCCTTCATGCGTGTTCTTCACAGTCAATGAAAACTCCGAATTGGCCCCTGTCAACTCCAGTGAAGGGAGTAAGAGCAAGCACTACAAGAACTCAAAGGTGTCGACAGATCCAGCCTGTGTTGTGATCCCTCATAGGACCTTTGCATTATCCCAGGAGCCTGTGCATGAATTCTATGGACATGATGATGCGATCTTGGATCTTTCATGGTCAAAAAATAGGGACTTACTTTCTTCATCCATGGATAAAACTGTACGATTGTGGCAGGTTGGGTGCAATAGTTGCCTGAAGGTTTTCTCCCATACTAACTACGTAACATGTGTGCAGTTTCATCCTACCAGTGACAATTATTTTATCAGTGGTTGTATCGACGGATTGGTTCGCATTTGGGATGTTCGTAGATGCCAAGTCGTGGACTGGGCTGATACCAAAGAGATAATCACTGCAGTTTGTTACCGCCCTGATGGAAAGGCCGCAGTGGTTGGGACCATAACAGGGAATTGTCGCCACTACGATGCATCAGAAAATCACCTGGAGCTGGAATCTCAAGTCGCTCTCAATGGAAGAAAGAAATCTCCACTTAAAAGAATAATCGGTTTCCAGTACTGCCCATCTGATCCAAAGAAATTGATGGTAACATCTGGCGACTCGCAAGTCCGTATTCTTGATGGGCTTCACGTAATTTCCAACTACAAAGGATTGCGAAGTTCAAGTCAAGTTGCTGCATCATTCACACCAGATGGAGATCACATTATATCTGCTAGTGATGATTCCAGTATCTACATGTGGAACTATGCAAACCAAATAGCTCCCGTCACAAACCATGTGAAGACTGTATGGTCAAATGAGCACTTTTCCTGCCATGATGTGGCCATTGCGATACCATGGAATGCCTCTCAGACAAGGAATTCTATTTCACTGGCTTGCAGTATCACTTCTTCACGGCAAGAAGTCTTGGATGAGTTCCACAATGAACATGATAGCTCATCATGTTCTCATACTGAGGATTCCCCTGATGGTGATAGTCTGTACCAATTACCATCTGGAAATTTCACTCTTAGCAGTGCCTTCTTTGCGGAATCTGCTCCAAGGGGATCAGCGACATGGCCAGAGGAGCAGTTGCCATCAAATTCGACAACACAGTCTACCTTGAGGAAATCTCAGTACAAGTTCCTGAAGGCTTCTTGCCAGAATGCTGCTACGCACGCCTGGGGCCAGGTCATAGTGGCTGCAGGCTGGGATGGCTACATCAGATCCTTCCAGAACTATGGCTTACCTGTGCAAGTGTGA</cdnaseq>

Protein Sequence

<aaseq>MARPRFEEDDEDEFFDSREVMSPASVSSPASSGRYDGPMLEVWATDPCSVHERRQRFIKSLGLSDSSPSAGGGGDRPDEEPCSRSSAAEEILPCSPTVELVSAVPSFACRGEEPGASGGGGGAEVLDCVFKNLDDGTVFVVDEMGKDGSFRSLRDRRSNRTVTAAEFERTYGSSPFICELMRRVDDSDESSAVEKALVRGRRRRRRFGWLRRLGIRGCVVDVEEDDETNSTSSSSCRSCSGKVDRVKVRHYKKRSKELSAVYRGQDIKAHEGAIVTMKFSSDGQYLATGGEDGVVRVWRVVEGERPNELDFAEDDPSCVFFTVNENSELAPVNSSEGSKSKHYKNSKVSTDPACVVIPHRTFALSQEPVHEFYGHDDAILDLSWSKNRDLLSSSMDKTVRLWQVGCNSCLKVFSHTNYVTCVQFHPTSDNYFISGCIDGLVRIWDVRRCQVVDWADTKEIITAVCYRPDGKAAVVGTITGNCRHYDASENHLELESQVALNGRKKSPLKRIIGFQYCPSDPKKLMVTSGDSQVRILDGLHVISNYKGLRSSSQVAASFTPDGDHIISASDDSSIYMWNYANQIAPVTNHVKTVWSNEHFSCHDVAIAIPWNASQTRNSISLACSITSSRQEVLDEFHNEHDSSSCSHTEDSPDGDSLYQLPSGNFTLSSAFFAESAPRGSATWPEEQLPSNSTTQSTLRKSQYKFLKASCQNAATHAWGQVIVAAGWDGYIRSFQNYGLPVQV</aaseq>

Gene Sequence

<dnaseqindica>1..1164#1257..1347#1438..1595#1692..1743#2885..2964#3052..3145#3223..3815#ATGGCGCGGCCCCGCTTCGAGGAGGATGACGAGGATGAGTTCTTTGACTCGAGGGAGGTCATGTCGCCGGCGTCCGTCTCTTCTCCGGCGAGCTCCGGGCGCTACGACGGCCCCATGCTCGAGGTGTGGGCCACCGACCCGTGCAGCGTCCATGAGCGCCGTCAGAGGTTCATCAAGTCCTTGGGCCTCTCGGATTCGAGCCCCTCCGCCGGCGGCGGCGGCGACCGGCCCGACGAGGAGCCGTGCTCGAGGTCCAGTGCCGCAGAAGAGATCCTCCCGTGCAGCCCCACCGTCGAGCTGGTCTCAGCCGTCCCCAGTTTTGCGTGCAGAGGCGAGGAGCCGGGAGCGTCAGGCGGCGGCGGCGGCGCGGAGGTGTTGGATTGTGTATTCAAGAACTTGGACGATGGTACAGTGTTTGTCGTCGATGAGATGGGAAAAGATGGGAGTTTCAGGAGCCTCAGGGACAGGCGATCCAACCGGACAGTTACTGCAGCGGAATTCGAACGGACCTACGGCTCGTCCCCATTCATCTGTGAGCTGATGCGGCGGGTGGATGATTCGGATGAGTCCTCTGCTGTGGAGAAGGCTCTGGTCAGGGGAAGGAGAAGGAGGAGGAGATTTGGATGGCTGCGCAGGCTCGGCATCCGTGGCTGCGTCGTCGATGTGGAGGAGGACGATGAGACGAATTCAACATCCTCGAGTTCTTGTCGGAGTTGCTCTGGGAAGGTTGATAGGGTCAAGGTGAGGCATTACAAGAAGAGGTCAAAGGAATTGTCCGCGGTGTACAGGGGCCAAGACATCAAGGCGCACGAAGGCGCAATTGTGACCATGAAGTTTAGCTCTGATGGACAGTATCTGGCCACTGGAGGTGAGGATGGGGTTGTGCGTGTGTGGCGGGTGGTGGAGGGGGAGAGGCCCAATGAACTTGACTTTGCCGAGGATGATCCTTCATGCGTGTTCTTCACAGTCAATGAAAACTCCGAATTGGCCCCTGTCAACTCCAGTGAAGGGAGTAAGAGCAAGCACTACAAGAACTCAAAGGTGTCGACAGATCCAGCCTGTGTTGTGATCCCTCATAGGACCTTTGCATTATCCCAGGAGCCTGTGCATGAATTCTATGGACATGATGATGCGATCTTGGATCTTTCATGGTCAAAAAATAGGGTTAGTTGTCATTGAACAAGGTTTTTCCATGTATCTGCAGTATCTTTTAATTGTCACATGGTCATCTAACTTCACTCGCCTTCTTTTTGCAGGACTTACTTTCTTCATCCATGGATAAAACTGTACGATTGTGGCAGGTTGGGTGCAATAGTTGCCTGAAGGTTTTCTCCCATACTAACTACGGTAAACCCTTTCCCCCGCTAAGTACAAGATTTAGCACATACCTCTTCCCAGCGTCTGATGCCGACATTCTGATTTTTGTCTATTATGCAGTAACATGTGTGCAGTTTCATCCTACCAGTGACAATTATTTTATCAGTGGTTGTATCGACGGATTGGTTCGCATTTGGGATGTTCGTAGATGCCAAGTCGTGGACTGGGCTGATACCAAAGAGATAATCACTGCAGTTTGTTACCGCCCTGATGGAAAGGTTTGTTCAACTGTTCTTTAAGTGTTTTTACCCAAGCGGCCATTTTCTGATTTTACTTAAATAGTTAAACATGTTTATTCTGCTGGCTTTATTCAGGCCGCAGTGGTTGGGACCATAACAGGGAATTGTCGCCACTACGATGCATCAGGTAATCATGCAATCATGAGCACACTCTATGTATGGCGCTTGTTATTGGCAGGCTAATGATTTTGGAAATAGTAGCTTCAATGAATCAACATCCTTGTTTGTTAATAGGTCAATATCGTTTGCTTTCATGACGACATCCTAGATGTATATGCAAATTGCTAATGATAGAAATGTCTTGTTTTGTCCCTGGTATGAGAATAGAGACAGCAGAATTGTTGTTATCCTCTAATTGCTTCTTTTGATCCTGTCTAAACTGTATGTGTGTATAGATTGCAGTTTACTACATGATGGAAAGATAGGTCATTTTATGAGATGATAGTGTTGCATTTATTTCCACCAAGTAGTACTGTCCACGAGACTTTTCTCCAGCTGGTTTTTATGCTACGATTTTCTTAAAAAAAATTGATCTCTGCCAAACTATCTTTTTGACCAATCACTGGTTGGACTCATTTTGTCCTGATGAATCAACAAAACTATGTCATCAATGGAGATGATATAGGAACCATTTTTTTTTTTTTGCGGGGAGATGATATAGGAACTTAGGAAACGGTACTATTGCATTTTGGTGATGAACAGGCAACATGTGCTAATATGCTATTTTCATAGCAAGGTCATGCATGTTGATGGTAGACAACAATTCTATTTTTCATTGGATAAGAACAGATAAGATTGAAATAGAAAAACATATATTTTCTTGGTTTATGTTTTGAAGCTAAGGTGCATATCCTGTATTGGCTGCAGAAGCCAAGTGTACTACCCTTGTTTGGGTATGCTGAAAGTATTGTTGGGGAAATTTAGGTCTATGATTCATGAGGTCCTTAATGGTTATAACCATTTCCTGCTTATAGATCTTGCAAAACACATAGCACTGGAAACTTGTTGCCTCATGCTTCAGTCAAGATTCAAATTAATGTTCCGTACATCGGGAAACAGCAAGCCAGTAAATACGATATTCAAAAGTCTGTTGTAATAGTTGTTGATTTGTAACAGTAGCTTAAATCCGCTTTGTTTAATTCAGACCAGGAACTTTAACTTCTTTGACTTGTGTTCTTTTAAAACATTTTCAAGTATGCTCAACGAAAATATGCTACTAGTATGTTTCTGATTCATTTGTTTTTTTCTAACTTTAATACTTTTTGCAGAAAATCACCTGGAGCTGGAATCTCAAGTCGCTCTCAATGGAAGAAAGAAATCTCCACTTAAAAGAATAATCGGTTTCCAGGTACCTTTTCTTATATTGCACGTTCTAATCTATTTTTTTGTCACATTTAATTCTTACAAAAGCAAATTTTCCTACATGCATTACCAGTACTGCCCATCTGATCCAAAGAAATTGATGGTAACATCTGGCGACTCGCAAGTCCGTATTCTTGATGGGCTTCACGTAATTTCCAACTACAAAGGTACTGACACCCTCTTCTAAGATCACTTTCAAAAGTATTTGTGACCCTTAGTTTACATGTCTATTTTCCATTCTCAGGATTGCGAAGTTCAAGTCAAGTTGCTGCATCATTCACACCAGATGGAGATCACATTATATCTGCTAGTGATGATTCCAGTATCTACATGTGGAACTATGCAAACCAAATAGCTCCCGTCACAAACCATGTGAAGACTGTATGGTCAAATGAGCACTTTTCCTGCCATGATGTGGCCATTGCGATACCATGGAATGCCTCTCAGACAAGGAATTCTATTTCACTGGCTTGCAGTATCACTTCTTCACGGCAAGAAGTCTTGGATGAGTTCCACAATGAACATGATAGCTCATCATGTTCTCATACTGAGGATTCCCCTGATGGTGATAGTCTGTACCAATTACCATCTGGAAATTTCACTCTTAGCAGTGCCTTCTTTGCGGAATCTGCTCCAAGGGGATCAGCGACATGGCCAGAGGAGCAGTTGCCATCAAATTCGACAACACAGTCTACCTTGAGGAAATCTCAGTACAAGTTCCTGAAGGCTTCTTGCCAGAATGCTGCTACGCACGCCTGGGGCCAGGTCATAGTGGCTGCAGGCTGGGATGGCTACATCAGATCCTTCCAGAACTATGGCTTACCTGTGCAAGTGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA011709