BGIOSGA011712

From RiceWiki
Revision as of 09:36, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA011712| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA011712, complete gene.| tag = OS03G01...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA011712

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA011712, complete gene.

LocusTag

OS03G0116000

Ensembl Transcript ID

BGIOSGA011712-TA

Ensembl Protein ID

BGIOSGA011712-PA

Length

3540

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:1138623..1142162

Sequence Coding Region

1138623..1139092,1139191..1139299,1139652..1139696,1139960..1140025,1140483..1140541
,1140747..1140822,1140946..1141077,1141167..1141274,1141800..1141854
,1141942..1142162

Genome Context

<gbrowseImage1> name=IndicaChromosome03:1138623..1142162 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:1138623..1142162 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCTTTCTCCGCGCGGAGGAGCCTCGCTTCCGGCCTCTCCCGCCACCTCTCCCGCCGTCTCCACCCCTCCGTCTCCCACCTCCTCCCCTCCCACCACGATGACCACTCCGAGAACCCCTCGCCCCCCGCCCAACCTCCGCCTCTCCCCTCCGCGCTTCGCTCGCCGTCGAGATCTCAGGCGCTCGGCCTCCCCCTCCCCTTCGGCCTCCTCCACGCGTCCCGCCGCAGCCTCTCCACCTCGCCCCGCTCCAACGACGAGCTCGATGCCTCCGCGGAGGTCCTCTCTGACGCCGCATCTTCGGTCTCCGTCCCGGCGGACGTCCTCGCGGACGCCGCGGCGTCTGTACCCGTCTCCGCCCCGGCGCCGTTCCCCGGGGAGGTGGCCGCGGCGGCCGCCGACTCGTTTGCACCGGTCGCCGCCCTGCAGCACCTCATCGACGGCGTCCATTCCTTGACGGGGCTGAACTGGTGGGCTTGTATTGCGCTCACGTCACTGTTGATCCGGACGCTAACTGTCCCACTGCTGCTGAACCAGATGAAGGCTACGGTGAAGCTAAATGTAAAGACTGACTCACCAGCAATGCGGCCAGAAATTGAAGCCATTAATTTGGAGATGCGAACTATATCTTCAACTCGCGTTGCTGGTAATGAAAAATCCAGCACACGAGTAACAGATGAAGGAAGCATGTCAACTGATCCTCAGTCAATGCTAGAGGGGAAAAGGAAATTGGGCGAGCTATTTCTAAGGCATGGCGTAACTCCACTGACACCATTGAAGGGTCTATTCATCCAAGCACCTATATTCATGAGCTTTTTCTTTGCCATATCAAACATGGTTGAGAAAGTTCCTTCTTTCAAAGGAGGCGGGATATATTGGTTTACTGATTTGACAACTCCTGATGAGCTTTTAATTCTCCCAATGTTGACATCGCTTACTTTCTTGGTTACGGTAGAGTTAAATATGCAAGATGGCATGGAAGGAAATCCTATGTTGAAGACGATGAAGAATTTCTCTAGAGTAATGGCTGTTTTGACTATTCCATTTACGATGAGCTTTCCCAAGGCAATTTTCTTTTACTGGGTCACATCGAACTTGTTCTCTCTTGGGTATGGTTTTGTTCTTCGGAAGCCAGCTGTGAGGAGTTTCTTAGATCTTCCTCCCATCGAAACTCAGTTTGCTCCGGCTCAACAGCCGACCTTCAACCTTTTTGGTGCATCCAAGTCAGTACCTGCAGCAGGTTCTTCTATTGCAGAATCAGATCGATCAAGTTCTGTTCTAAGCCAGCGGTTCAGCGATCTTGAAAACAGAGCTAAATCAAGACGTGAATCCCAAGATTAA</cdnaseq>

Protein Sequence

<aaseq>MAFSARRSLASGLSRHLSRRLHPSVSHLLPSHHDDHSENPSPPAQPPPLPSALRSPSRSQALGLPLPFGLLHASRRSLSTSPRSNDELDASAEVLSDAASSVSVPADVLADAAASVPVSAPAPFPGEVAAAAADSFAPVAALQHLIDGVHSLTGLNWWACIALTSLLIRTLTVPLLLNQMKATVKLNVKTDSPAMRPEIEAINLEMRTISSTRVAGNEKSSTRVTDEGSMSTDPQSMLEGKRKLGELFLRHGVTPLTPLKGLFIQAPIFMSFFFAISNMVEKVPSFKGGGIYWFTDLTTPDELLILPMLTSLTFLVTVELNMQDGMEGNPMLKTMKNFSRVMAVLTIPFTMSFPKAIFFYWVTSNLFSLGYGFVLRKPAVRSFLDLPPIETQFAPAQQPTFNLFGASKSVPAAGSSIAESDRSSSVLSQRFSDLENRAKSRRESQD</aaseq>

Gene Sequence

<dnaseqindica>1..470#569..677#1030..1074#1338..1403#1861..1919#2125..2200#2324..2455#2545..2652#3178..3232#3320..3540#ATGGCTTTCTCCGCGCGGAGGAGCCTCGCTTCCGGCCTCTCCCGCCACCTCTCCCGCCGTCTCCACCCCTCCGTCTCCCACCTCCTCCCCTCCCACCACGATGACCACTCCGAGAACCCCTCGCCCCCCGCCCAACCTCCGCCTCTCCCCTCCGCGCTTCGCTCGCCGTCGAGATCTCAGGCGCTCGGCCTCCCCCTCCCCTTCGGCCTCCTCCACGCGTCCCGCCGCAGCCTCTCCACCTCGCCCCGCTCCAACGACGAGCTCGATGCCTCCGCGGAGGTCCTCTCTGACGCCGCATCTTCGGTCTCCGTCCCGGCGGACGTCCTCGCGGACGCCGCGGCGTCTGTACCCGTCTCCGCCCCGGCGCCGTTCCCCGGGGAGGTGGCCGCGGCGGCCGCCGACTCGTTTGCACCGGTCGCCGCCCTGCAGCACCTCATCGACGGCGTCCATTCCTTGACGGGGCTGAACTGGTAACCTCGTCGTGGCTGTCTAACTAAGCTTCAAAAAATTTGATCGAGATAACCTCTGTGTGAACTGAATTTTGTTTGATGCATTGATAATTGTGTAGGTGGGCTTGTATTGCGCTCACGTCACTGTTGATCCGGACGCTAACTGTCCCACTGCTGCTGAACCAGATGAAGGCTACGGTGAAGCTAAATGTAAAGACTGACTCACCAGTGTGCATGTTAGCTACCAGTAGATTCTATCAACAGTCAAATAATTTATTATATGCATGTTTGGTTTGCTGCCATGGTATTACATCAGAGATGCAAATTTGTTAAAGTCGATAAGTTTGAAAACTTGAGAGTGGCTGTTGAACACGTTGGGTTCTCAATTCTGCACAATTTCTAGAGCACAGATCCTGTTTTATGATCCTACAACGATGTACGAACTTAGTTAGTTACTTGCTTTGGCTGGACGCTTTATCTTATTAACTTAATCACTTATAATGTGTCTATAAGTCTTGTTGGGTTTTTATTGCAAGATCATTAGTTGTATTTCCTCAGTTGGAATTCTTATATCATGCAGGCAATGCGGCCAGAAATTGAAGCCATTAATTTGGAGATGCGAACTGTAAGCCTTTATTTCTATTCAGTTAAATATTCATTTTGTATGTTATACCTTGAACATGCTATTTGTATCTCTAATGTGGTAAACCATAGTACTGTGTGGTTTTGAAGGCAAAGAAAGGTCAAATGCTTTTGTAGCAAGTAGCTACGTTAGTTATCTTCTATCATCTAGCTAGACATAATCAGGGCCATGAACACTCTTCCACTATAGTCAAGTTTGTCTAAGCTGAGTTTCCAATACTAAGTACACTAATAATCCGTGTTTAGATATCTTCAACTCGCGTTGCTGGTAATGAAAAATCCAGCACACGAGTAACAGATGAAGGAAGCATGGTTAGTAGGCTAGGTTTTTGGTCCATTTCTTTAAAGTGCATTTTTCATAGGAAGTGTAGTAATGTCCTAAAATGCCGCATTATCTATTTGAAACCATGTAGTAGAGGATCAAACCGCCACAGAAGTGACGAGCTTTTAAATGTTTTGCTCTCCACTGGAGAGTCGCCTTGGTCATGTGGGCAATGATTTTGCTTGGCAGCGCAAGTTTTTTTGAGCTTTACCAAATACTTGCTGTTGGTAGGTGAGCATATGCTATTTGGCCAGTTGCTTTATCTAGCAGCCAGCAGGGTAACCAAGCATGCCTTTAATGAAAGGAAAGAAAACACATATTTGTGTATTGGACAACACTGATCCCATATCAATAGCTTTTTTGCAGAAGCCTTAATTCTAAACTTTTCAAAAGACTACTTAAATAACTATTAACTAATGATATAATCAATCCCGTTTACTTTTTCAGTCAACTGATCCTCAGTCAATGCTAGAGGGGAAAAGGAAATTGGGCGAGCTATTTCTAAGGTATATGTTCACTTGTTCATTTTTGTTCACTTATGATCTGGAAGTGCCTCTTCTTTTCTTGTTTTTGCCTCTTAGCACATACTTTTTTAACATTTACATGTCTCGCTGAACTTGAGTTTGCCACTGCAATATAACCTAACCACTTCTGTATTCACTTAGTAGTCGTGAAATATCTTTTTTTAAAAAAATTCATGGCTGTCTTCAGGCATGGCGTAACTCCACTGACACCATTGAAGGGTCTATTCATCCAAGCACCTATATTCATGAGCTTTTTCTTTGCCGTAAGTTTGCACCACTTCCTTATTACTTCTAAACTAGTAATGCCACACTGTGTTCCACCTTGCAATAACATTTACCTGATGTTTAACTTCTAGCATTTGTTCTGTACTCTGTTCCAATTTCAGATATCAAACATGGTTGAGAAAGTTCCTTCTTTCAAAGGAGGCGGGATATATTGGTTTACTGATTTGACAACTCCTGATGAGCTTTTAATTCTCCCAATGTTGACATCGCTTACTTTCTTGGTTACGGTAGAGGTATGATGTAGGTCACCATTTTGGCAAACACAATTCATGCATCTTATGTTATTGTATAGTCAGTTACGAAACTATGTTGCGGTTTTCAGTTAAATATGCAAGATGGCATGGAAGGAAATCCTATGTTGAAGACGATGAAGAATTTCTCTAGAGTAATGGCTGTTTTGACTATTCCATTTACGATGAGCTTTCCCAAGGTATGAACTATCAAGTACTCAGAATCTAAGTTTACATAATTCATATACTGTGGGAAAATTTACGAGAAAACTAGGAGTTTGGAGATACTCAAAACTACATTGCATGTCTCAAGAGAAAAGCTTGAACTTTAACTTAAAACACCCCAAGAACCAACTAACCAAGATGATTTCACCATCAGTCGGGCAAAAGTTTGACGAAGTGAGGTTCGATCAACAGAGATATCAAAATTTTAGTTTATATCTTAGTACGAGTGAGGAATACAGTCGCTATAAAACTACACTAGATAGGCAGTAGAATGAAAACTGAGCAGCTAGGTTTTACTGTTTAGCAAGTACTGCATAGCTTGTATTGCTAAGGACAGTCAGGGTTCCGCACTTGTCCTTATAGTTGCTTTTGCTAAGGGGCTTTTTTTGGTCTGCCTATTTAGATCTTTCATAAGTGCCGTCTTTTGTGACAAATTGATGCATGGTGTTAATATTAACACAAAGAAATCGATGGTATTCAGCTTCTCGTTTCTTCTGCAGGCAATTTTCTTTTACTGGGTCACATCGAACTTGTTCTCTCTTGGGTATGGTTTTGGTAAGTCATTTATCATGCTTCAGACCTCTGGCAACCTCCATTTTTTTTGTGATCCTAACGTGCAAATATTTTTTTTATTTGGTTCAGTTCTTCGGAAGCCAGCTGTGAGGAGTTTCTTAGATCTTCCTCCCATCGAAACTCAGTTTGCTCCGGCTCAACAGCCGACCTTCAACCTTTTTGGTGCATCCAAGTCAGTACCTGCAGCAGGTTCTTCTATTGCAGAATCAGATCGATCAAGTTCTGTTCTAAGCCAGCGGTTCAGCGATCTTGAAAACAGAGCTAAATCAAGACGTGAATCCCAAGATTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA011712