BGIOSGA011725

From RiceWiki
Revision as of 09:36, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA011725| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA011725, complete gene.| tag = OsI_097...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA011725

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA011725, complete gene.

LocusTag

OsI_09750

Ensembl Transcript ID

BGIOSGA011725-TA

Ensembl Protein ID

BGIOSGA011725-PA

Length

3730

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:1210991..1214720

Sequence Coding Region

1210991..1211062,1211753..1211937,1212213..1212333,1213733..1213906,1214045..1214208
,1214305..1214392,1214486..1214539,1214631..1214720

Genome Context

<gbrowseImage1> name=IndicaChromosome03:1210991..1214720 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:1210991..1214720 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGGCGGAGAGGAAGGACGTGGGCATTCTCGCCATGGACATCTACTTCCCGCCCACCTGCGTGCTCCAGTACGAGAAGGAGGAGAAGATTGGGGAGGGCACGTACGGGGTGGTGTACAGGGCGCGGGACAAGGTCACCAACGAGACGATCGCGCTCAAGAAGATCCGGCTTGAGCAGGAGGATGAGGGCGTCCCCTCCACCGCAATCCGCGAGATCTCGCTCCTCAAGGAGATGCATCACGGCAACATCGTCAGGTTACACGATGTTATCCACAGTGAGAAGCGCATATATCTTGTCTTTGAGTATCTGGATCTGGACCTAAAGAAGTTCATGGACTCTTGTCCAGAGTTTGCGAAAAACCCCACTTTAATTAAGTCATATCTCTATCAGATACTCCGCGGCGTTGCTTACTGTCATTCTCATAGAGTTCTTCATCGAGATTTGAAACCTCAGAATTTATTGATAGATCGGCGTACTAATGCACTGAAGCTTGCAGACTTTGGTTTAGCCAGGGCATTTGGAATTCCTGTCCGCACGTTTACTCACGAGGTTGTAACCTTGTGGTATAGAGCTCCAGAGATCCTTCTTGGATCAAGGCAGTATTCTACACCAGTTGATATGTGGTCAGTTGGTTGTATCTTTGCAGAAATGGTGAACCAGAAACCACTGTTCCCTGGTGATTCTGAGATTGATGAATTATTTAAGATATTCAGGGTACTAGGAACTCCAAATGAACAAAGTTGGCCAGGAGTTAGCTCATTACCTGACTACAAGTCTGCTTTCCCCAAGTGGCAGGCACAGGATCTTGCAACTATTGTCCCTACTCTTGACCCTGCTGGTTTGGACCTTCTCTCTAAAATGCTTCGGTACGAGCCAAACAAAAGGATCACAGCTAGACAGGCTCTTGAGCATGAATACTTCAAGGACCTTGAGATGGTACAATGA</cdnaseq>

Protein Sequence

<aaseq>MAAERKDVGILAMDIYFPPTCVLQYEKEEKIGEGTYGVVYRARDKVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMHHGNIVRLHDVIHSEKRIYLVFEYLDLDLKKFMDSCPEFAKNPTLIKSYLYQILRGVAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRQYSTPVDMWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRVLGTPNEQSWPGVSSLPDYKSAFPKWQAQDLATIVPTLDPAGLDLLSKMLRYEPNKRITARQALEHEYFKDLEMVQ</aaseq>

Gene Sequence

<dnaseqindica>1..72#763..947#1223..1343#2743..2916#3055..3218#3315..3402#3496..3549#3641..3730#ATGGCGGCGGAGAGGAAGGACGTGGGCATTCTCGCCATGGACATCTACTTCCCGCCCACCTGCGTGCTCCAGGTCAGCCACCAATCGATCTCATCTCCCGATTCTTCCCTACTGATCAACCTCGTCGATCGTATCATATTTCTCCCACTACAATCCGTGTTTTTCTTTTACAAATTTAGTCCCATGTTTTCAACTTTTCATAACTTGCAACACGAGTGCAATCAAAACAAGATTTGGAGGAAGAGGAATCCTTCAAATATTTTTAGAAGAAAACATGAGCGTATTGAGAATTGAACACATTATTTCAAGTTAAAACCACACACCTCTTATCACTCAAACAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGAAGCAGTGCAAGGCAATCGAGTTGGGAGTGAGGACCAGCGAGCAACCAGCCCCCCGCCCCCAATGGCGGCAGCAGCCGCAGCAGCAGCTTTGCCCACCGCTGCCGCTTTTGCCCACCTCTCCTCCGATTAATCCCCTCCCCTCCTCTTCCTCCCACTTCTCCGCCTGCTCTTCCTCCCCTCGCCGACCTTACCTACTCGCGCCGCCGCCGTCGCATTGGGCGGCAAACGGAGGGGGGGTTAACCCTGATGGAGCAGGTGAGCGCCTCGAGCGATCTGATTCGATTTCTGTTCTTGGGGGACTAGGGGGTTTTGATCCTGCAAACCTTTGCTTGTTTTTGTGGCTGTGTGTGCGGCGGGGGCGGGGCGCAGTACGAGAAGGAGGAGAAGATTGGGGAGGGCACGTACGGGGTGGTGTACAGGGCGCGGGACAAGGTCACCAACGAGACGATCGCGCTCAAGAAGATCCGGCTTGAGCAGGAGGATGAGGGCGTCCCCTCCACCGCAATCCGCGAGATCTCGCTCCTCAAGGAGATGCATCACGGCAACATCGTCAGGTCCTCTCTATTAACACTCTGTTGTTGTTAGGACTTTGGATTGACTAAGTCATCACGGACTGATTGATTGGTTGGCTGATTGATTGACTGATTGATTGATGTGGGCAATACATTGAGCTAGCATTTGCCTTTATGCAACAGTAGCTAGGCCTGATTTTAGGACCATTAATCATACATTGATCATAGTTGTGTGCAGTGTAGTAATAATGCTGTTACTTTGGCAGCGAGATGATTTGCATTGTTGGTTTGCTGAGAAACTCTATCACTGCGTGCAGGTTACACGATGTTATCCACAGTGAGAAGCGCATATATCTTGTCTTTGAGTATCTGGATCTGGACCTAAAGAAGTTCATGGACTCTTGTCCAGAGTTTGCGAAAAACCCCACTTTAATTAAGGTGAGTGGCCCTAAATGCAAAAATATGTTGTCATGACTCACTTCTATTATTTTCTGCATATGGTTGAACTCGAAATGTTGGCTTGAGCATTATTGATCAATGGTTTGTTATACATCTTATAACTTGGAAACAATGTGAAGGTGGTATAAGTAACCTTACTAAAGAATTACTCTTGGCTGCATAGACCAAAATGTTAGTCTAGTATATTCTCATTTCATCTGAAAGAATTCAGCACTAGTGTCATTCAAGATTTTGGTGCAAAGATGTATGTGGAACCCGCAGTACATCTTATGCTCTCCATATTTGGTTTATGGACTGTTGACTTGTTCTGTCGTGGTGTTCCATATCATAGGAGGAAGGTGCCCGGTTTGTCATTCCACTAGAGCAATACTTAGCATAAACCAGAATGCACAATTTGGGAAATAGGACCCATGTGTATGTTACTTCATGCGCTCTTCATGTTTGGACTGTTGCTCTGTGACTACCATGATTTTTTAGGAAAAATGTGCATGTGCTCTTTGGACATATATGTGCCTACGTGCATTTTAAAAAACTTTAGAGATGCAATGGACTGACATTGTTTGGGTAAGGTTGGGCTTTTCATATTCTCATACACCTATCAGTAACATGATAGGACCAGTTCCTAAGCAAATTGTTTTATAGTACTTCTGTGCTCTTCTGAGGGCATAGCTAGTAGCCATCATGGATTATCTCCCCTAAATAAAGAGATGCGTTGTAAAGCAATTTTTGCTCCACAGTAAATCCTGTAGACCGTAAATAAAATATATCTTCACTGTTAGTGGGGCTTCTCTGTGGCCAAAAATGTCTGGCAGCGTGGCACCACCACCACCAGCTCAGTACTGCATGTTCCCCATATAGGAATCATTGCTGCCATGCTTGTTTTTGGGTAACTATTCAGAATTTACTGCACAAAGAACTGGCACTCTATTTCCTTCTACTATCTTTTTTGGGTCAGAACTATCAATTCTGACAGTCAAGTTTGGGACCTTGGGTCAAAGTGGTCTCAACTCATCCTGTATTTTCTTTTCCTCATTAGCATCGCATATACTTTGAATCTTTGCCCATAAGGTATTGGAAGTCATGATGAAATTCGCTTAAATATGTAATGTGGCAACATGTTTTTATCCTTTGAATAGTGTAGCTTAGTAGTATGAAGTTGAAGCAGCCTTACTTGATCGGAGTGGCTGCCTTATACAGTGAAACAAAGTAAAGATTGGCATGATTGGAAGCTTTCATGCTTTTCTTCATTATTGTGTCTACATTCTTGTTCATGCGAAAAATATGTGTCTACATTCCTGTTGCATTCATGCTTGACCAGAAAGTGTATTAGTTTATTGTGGTTGCATCTTGGAATGTGACTGTTTTCTTCTTTCTCCAGTCATATCTCTATCAGATACTCCGCGGCGTTGCTTACTGTCATTCTCATAGAGTTCTTCATCGAGATTTGAAACCTCAGAATTTATTGATAGATCGGCGTACTAATGCACTGAAGCTTGCAGACTTTGGTTTAGCCAGGGCATTTGGAATTCCTGTCCGCACGTTTACTCACGAGGTACTATAGATTTGTGTTCAACATTTTGGTTTCTTCATAAAGTACATTTTTTTTCGTCATAAAGTTCATTTTTCATTTACCTTTTCTATACACTAGCACATTAACTCACAATGGATGTCTATGGGAAGTATTTTTCAGGTTGTAACCTTGTGGTATAGAGCTCCAGAGATCCTTCTTGGATCAAGGCAGTATTCTACACCAGTTGATATGTGGTCAGTTGGTTGTATCTTTGCAGAAATGGTGAACCAGAAACCACTGTTCCCTGGTGATTCTGAGATTGATGAATTATTTAAGATATTCAGGTTCTATTATTGTACTGAGATTACCTTTTTTTGTTCTGTTAATTGTGTTTTTGCCAACTCTATGATTTATGTGTTGTGTTCTGGTTACTTTTGAAGGGTACTAGGAACTCCAAATGAACAAAGTTGGCCAGGAGTTAGCTCATTACCTGACTACAAGTCTGCTTTCCCCAAGTGGCAGGCACAGGTATGACAAAACAGCATAAAGATTTTATTAGGCGGGTGAACTGCATCCATATACTGTGCCACTAATATTCCTTGACTGAAATCTTCATCCCAGGATCTTGCAACTATTGTCCCTACTCTTGACCCTGCTGGTTTGGACCTTCTCTCTGTAAGTCGAACACCACTCACCTTTGTTCATTAGCATGTCATAATATACCCCAAAAAAAAAGTATCCCATCCTTGTCTCGTTTCACTGTCAGAAAATGCTTCGGTACGAGCCAAACAAAAGGATCACAGCTAGACAGGCTCTTGAGCATGAATACTTCAAGGACCTTGAGATGGTACAATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA011725