BGIOSGA011729

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Revision as of 09:36, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA011729| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA011729, complete gene.| tag = OJ1263H...")
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Gene Name

BGIOSGA011729

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA011729, complete gene.

LocusTag

OJ1263H11.4

Ensembl Transcript ID

BGIOSGA011729-TA

Ensembl Protein ID

BGIOSGA011729-PA

Length

5804

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:1228887..1234690

Sequence Coding Region

1228887..1228958,1230284..1230390,1230831..1230930,1231680..1231786,1232089..1232221
,1232307..1232450,1232769..1232927,1233045..1233118,1233204..1233279
,1233655..1233710,1233830..1233917,1234003..1234143,1234236..1234385
,1234499..1234690

Genome Context

<gbrowseImage1> name=IndicaChromosome03:1228887..1234690 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:1228887..1234690 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGGCGGAGAGGAAGGACGTGGGCATTCTCGCCATGGACATCTACTTCCCGCCCACCTGCGTGCTCCAGGACGAGCTGGAGAATCATGATGGCGTGAGCAAAGGGAAGTACACCATTGGGCTTGGACAGGATAGCATGGCCTTTTGCACTGAAGTGGAAGATGTTATTTCCATGAGCATCGCAGCGGGGAGAACCAGCCACGTGCGCCTGGGCCACCTCCGCGCATTCGGTGAACTGGAGCAGAGAGCAAAGAAGAGTTCAGAGTTGCGATTCCAAGACGAGCTGGAGAATCATGATGGCGTGAGCAAAGGGAAGTACACCATTGGGCTTGGACAGGATAGCATGGCCTTTTGCACTGAAGTGGAAGATGTTATTTCCATGAGCTTGACAGTAGTGAAGTCACTCCTGGAAAACTATAAGATTGATCCAAAATGTATTGGACGTTTGGAAGTTGGCAGTGAAACAGTAATAGACAAGAGCAAGTCTATAAAAACATGGCTGATGCAAATATTTGAGGAATGCGGTAATACTGACATTGAAGGAGTTGACTCCTCAAATGCATGCTACGGTGGAACAGCTGCTTTATTTAATTGTGTTAATTGGGTCGAGAGCAACTCATGGGATGGACGTTATGGGCTTGTTGTTTGCACAGACAGCGCGGTTTACGCTGAAGGTCCGGCTCGTCCAACCGGTGGTGCAGCTGCTATTGCAATGTTGATTGGACCAAATGCTCCAGTTTCTTTCGAAAGCAAGTATAGAGGATCTCATATGGCACATGTCTATGACTTTTACAAGCCTGATCTTGCTAGTGAATACCCGGTGGTCGATGGAAAGCTATCACAGACATGCTATCTCATGGCATTAGATTCCTGCTACAATGTCTTCTGCAAAAAGTATGAAAAGCTTGAGGGAAAGCAATTTTCTATTCATGATGCAGACTATTTTGTATTTCACTCCCCGTACAACAAGCTTGTGCAGAAGAGCTTTGCACGCCTATACTACAACGATTTTCTGAGAAAATGCAGCACGGTGGAAGATGGATCAAGAGAAAAACTGGAGCCTTATTCAGGTTTGTCATCCGAGGAAAGCTACCAGAGTAGAGAACTTGAAAAGGCTTCTCAGCAAGTTGCGAAGCACCTCTATGATTCAAAGGTTCAACCAACTACATTAATCCCGAAACAAGTCGGGAATATGTACACAGCGTCTCTATATGCTGCTTTGGCATCAGTGATGCATAACAAAAATGAAACTCTGGCAGGCCAAAGGATTGTCATGTTCTCATACGGCAGTGGCTTGACATCAACAATGTTCTCTTTCAAGATCAATGAAGGCCAGCATCCATTCATCCTATCAAACATTGCAGGCATACTGGATGTCTCCAAGAAACTGGAGTCCAGGCATGTGGTTGCGCCGGAGAAGTTCGTGGCGGCGCTGAAGCTGATGGAGCACCGGTACGGCGCCAAGGATTTCACGACGAGCCAGGACACGAGCCTGCTCGCTCCAGGCACCTACTACCTCACCCACGTCGACTCCATGTACAGGAGGTTCTACGCCGTCAAAGGTCAAGCCGTCACCGAAGTGTCCAATGGCCATTGA</cdnaseq>

Protein Sequence

<aaseq>MAAERKDVGILAMDIYFPPTCVLQDELENHDGVSKGKYTIGLGQDSMAFCTEVEDVISMSIAAGRTSHVRLGHLRAFGELEQRAKKSSELRFQDELENHDGVSKGKYTIGLGQDSMAFCTEVEDVISMSLTVVKSLLENYKIDPKCIGRLEVGSETVIDKSKSIKTWLMQIFEECGNTDIEGVDSSNACYGGTAALFNCVNWVESNSWDGRYGLVVCTDSAVYAEGPARPTGGAAAIAMLIGPNAPVSFESKYRGSHMAHVYDFYKPDLASEYPVVDGKLSQTCYLMALDSCYNVFCKKYEKLEGKQFSIHDADYFVFHSPYNKLVQKSFARLYYNDFLRKCSTVEDGSREKLEPYSGLSSEESYQSRELEKASQQVAKHLYDSKVQPTTLIPKQVGNMYTASLYAALASVMHNKNETLAGQRIVMFSYGSGLTSTMFSFKINEGQHPFILSNIAGILDVSKKLESRHVVAPEKFVAALKLMEHRYGAKDFTTSQDTSLLAPGTYYLTHVDSMYRRFYAVKGQAVTEVSNGH</aaseq>

Gene Sequence

<dnaseqindica>1..72#1398..1504#1945..2044#2794..2900#3203..3335#3421..3564#3883..4041#4159..4232#4318..4393#4769..4824#4944..5031#5117..5257#5350..5499#5613..5804#ATGGCGGCGGAGAGGAAGGACGTGGGCATTCTCGCCATGGACATCTACTTCCCGCCCACCTGCGTGCTCCAGGTCAGCCACCAATCGATCTCATCTCCCGATTCTTCCCTACTGATCAACCCTCGTCGATCGTATCATATTTCTCCCACTACAATCCGTGTTTTTCTTTTACAAATTTAGTCCCATGTTTTCAACTTTTCATAACTTGCAAACACGAGTGCAATCAAAACAAGATTTGGAGGAAGAGGAATCCTTCAAATATTTTTGGAAGAAAACATGAGCGTATTGAGAATTGAACACATTATTTCAAGTTAAAACCACACACCTCTTATCACTCAAACAGAGTGCAATCGCAATCTAGTCAGATCTTTTGCCTTTGGATAACCCTTTCCGTTTTCTCGTTTGTTCGGGAGATCGAGTAAAAAAACACACACACCCTTTGCGTGACTTTCTCTGCGTAACTGTGGTGGAATCACGGTTGGTGAGAGGTTTACTTTACTACCGGTTTCCGGTGAAGATTTTCCAGCTTTCCACCCCCTTCTTCGCCAGCATCGCAGCGGGGAGAACCAGCCACGTGCGCCTGGGCCACCTCCGCGCATTCGGTGAACTGGAGCAGAGAGCAAAGAAGAGTTCAGAGTTGCGATTCCAAGTTTACTCCATGGTTGGACTATCCGTGAAAAAAAAAATGAAAGAAGCAACTAAAAAATAATTTACCAGTAAAACTTTTATAACTTTGGTCTCAGTGGTTTAAAAGCCAATGCTAAAATATCAAATATAAACCGCGATGGAAAAAAATATATATCAAAATCAACTTTAAAATTAAGTCAGCAAATATATGATTGCTGTAGTGAGTACTAATCGTGCTACTCGTTGTAGCTTACGTTACCATTTAGGAGTATAGTACAGGGGAGATTAAAGCTGCCGTTTTCAGGGAGGCGTGATTAATTGCTGACCGCTTACGTGTGGATGTTTGCACCTGCTTCTGCTTGAGTTGAGAGAAATTAATTAAAATGCTGTTCCGCGGGAGAATTTGCTGTGGAAGATGCCAATTGAAACAGCTTGGCACAGAATCAGTAGGGCCTTGACTCGTTTAAGATTGTGTTGACAATCGATCAAATCACTAGAACTAGATGGTGATGGCTTCCAAGACATGGCGGCTTACTATGCACATGTGTACATTGAATTGGGTGCTGATAAAATGGTTTATGTTCTTCTGCCGACGACCGGGATATGTCGGGACCTTTTCTTTATGGTAGTAGTTCTGTCAGTGATATAACTTGTACAGAGTGGTTGTGTGTTGGCAATATCTCAATGCTGTACATCATGTCGATATTAATAATCTTTATTTCGTGTTTCACCTAGTATTAGATTGCAAATGCATGTGATGTTTGCTACAGGACGAGCTGGAGAATCATGATGGCGTGAGCAAAGGGAAGTACACCATTGGGCTTGGACAGGATAGCATGGCCTTTTGCACTGAAGTGGAAGATGTTATTTCCATGAGGTATGCCTATTCCTATGTAGAAAACGCACCATTGGTGTGGTAGAGTTGTGTGTCCTACCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGCAATCAAAACAAGATTTGGAGGAAGAGGAATCCTTCAAATATTTTTGGAAGAAAACATGAGCGTATTGATAATTGAACACATTATCTCGAGTTAAAACCACACACCTCTTATCACTCAAACAGAGTGCAATCGCAATCTAGTCAGATCTTTTGCCTTTGGATAACCCCTTTCCGTTTTCTCGTTTGTTCGGGAGATCGAGTAAAAAAACAAACACACCCTTTGCGTGACTTTCTCTGCGTACTGTGGTGGAATCACGGTGGTGAGAGGTTTACTTTACTGCCGGTTTCCGGTGAAGATTTTCCAGCTTTCCACCCCCTTCTTCGCCAGCATCGCAGCGGGGAGAACCAGCCACGTGCGCCTGGGCCACCTCCGCGCATTCGGTGAACTGGAGCAGAGAGCAAAGAAGAGTTCAGAGTTGCGATTCCAAGTTTACTCCATGGCTGGACTATCCGTGAAAAAAAAATGAAAGAAGCGAGCTAAAAAATAATTTACCAGTAAAACTTTTATAACTTTGGTCTCAGTGGTTTAAAAGCCAATGCTAAAATATCAAATATAAACCGCGATGGAAAAAAATATATATCAAAATCAACTTTAAAATTAAGTCAGCAAATATATGATTGCTGTAGTGAGTACTAATCGTGCTACTCGTTGTAGCTTACGTTACCATTTAGGAGTATAGTACAGGGGAGATTAAAGCTGCCGTTTTCAGGGAGGCGTGATTAATTGCTGACCGCTTACGTGTGGAATGTTTGCACCTGCTTCTGCTTGAGTTGAGAGAAATTAATTAAAATGCTGTTCCGCGGGAGAATTTGCTGTGGAAGATGCCAATTGAAACAGCTTGGCACAGAATCAGTAGGGCCTTGACTCGTTTAAGATTGTGTTGACAATCTATCAAATCACTAGAACTAGATGGTGATGGCTTCCAAGACATGGCGGCTTACTATGCACATGTGTACATTGAATTGGGTGCTGATAAAATGGTTTATGTTCTTCTGCCGACGACCGGGATATGTCGGGACCTTTTCTTTATGGTAGTAGTTCTGTCAGTGATATAACTTGTACAGAGTGGTTGTGTGTTGGCAATATCTCAATGCTGTACATCATGTCGATATTAATAATCTTTATTTCGTGTTTCACCTAGTATTAGATTGCAAATGCATGTGATGTTTGCTACAGGACGAGCTGGAGAATCATGATGGCGTGAGCAAAGGGAAGTACACCATTGGGCTTGGACAGGATAGCATGGCCTTTTGCACTGAAGTGGAAGATGTTATTTCCATGAGGTATGCCTATTCCTATGTAGAAAAGCACCATTGGTGTGGTAGAGTTGTGTGTCCTACCAGGCTCAAATCCTATTCCTATGCATTTTCAGAGAACATGTGCAACATAGTATTTGTGATTCTGAAGACAAATGTGACCCTCAAGTGTCCTATCCGTGCCCTATAAAGTCAAACAGTGATAAACTATGCTAGATCCTTAGCCAAGGATTTTATGTTGAAATTTTAATTTCAGGAATAAAGACATTAATCTCCATTATTCATTTATCCCTTTTTTATGCATTTAATTGATCAAGAGTTTAACGCAGCTTGACAGTAGTGAAGTCACTCCTGGAAAACTATAAGATTGATCCAAAATGTATTGGACGTTTGGAAGTTGGCAGTGAAACAGTAATAGACAAGAGCAAGTCTATAAAAACATGGCTGATGCAAATATTTGAGGTTTGTACCTTTCAGCAGAACATAGGAGTACATATTATGGTTTATGTGCTTTCATAAGGCTTATGACAACTTTGTTTAAATGCAGGAATGCGGTAATACTGACATTGAAGGAGTTGACTCCTCAAATGCATGCTACGGTGGAACAGCTGCTTTATTTAATTGTGTTAATTGGGTCGAGAGCAACTCATGGGATGGACGTTATGGGCTTGTTGTTTGCACAGACAGCGCGGTATGTACAACTCCAGTGTTAATTGGGAATACTTTTCCTTTCATGTACTCAATTTCGTACTGTACAGATTACCAGTGTACAACTCCATTTCTTTTCCTGGGTTACTGATGATGGCTATATGAGTACATGTATTCATATATATCACGTCCTTGTTTTTCTCATTTTTTTTCTTAGTTTCTGTTATTGACCACCACCACAAATCCACAAGTGTTTTTCCTTAAGTACTGAAGGCAAGCATAATATAGGTTTGCTACTATGGTTCTCATGCTTACATTTTGCATCCAATATTAATTCTATAGCTGACATTTGTCTCTTTAGGTTTACGCTGAAGGTCCGGCTCGTCCAACCGGTGGTGCAGCTGCTATTGCAATGTTGATTGGACCAAATGCTCCAGTTTCTTTCGAAAGCAAGTATAGAGGATCTCATATGGCACATGTCTATGACTTTTACAAGCCTGATCTTGCTAGTGAATACCCGGTCTGCCTCTGGCCCACACAATTCTTACACCTCAAACCCAAGTTCGGATTAGCACATAGAGAACTAGCTTGAAATAAACTGGAATTGATTTATTCATGGCATCTGCAATTTGTTCAGGTGGTCGATGGAAAGCTATCACAGACATGCTATCTCATGGCATTAGATTCCTGCTACAATGTCTTCTGCAAAAAGTAAGCTGTATTCCATATTGCTTTAACACATTAGTCAAGCTGAGCCTGTTGATTGAATCAGAACCCACTGGTTTTCATCTTTCAGGTATGAAAAGCTTGAGGGAAAGCAATTTTCTATTCATGATGCAGACTATTTTGTATTTCACTCCCCGTACAACAAGGTACCATAAAAATCTCATATCATGTACCTTAGTAGTATCTTGGTGGTATAGTGGATTACAGCCACAATTGTGCAGACACTTGATATTCACACTTATTTAAGGCATCTTATTCACTGAAAGAAATAGGCATCTTATTTAAAAAACTTTTCAAATAAATAGAACTCGAGGTTCCCGACATGAGTAGTGAGTAGAATATATGCATATTTAGACTGATTCTTGATTGCATACTGTCACATGACATGGATATGCTGATCTTACCAGTCTGCACTTCGATCTTGGTTAGGAGTCGCATGCTCGCATAACTTACCTTGCCCTTTTGATATGTTGATGTAATTTTCAGAACTTATTTTTTTCCTTTTTCATTGTTTTCTGCAGCTTGTGCAGAAGAGCTTTGCACGCCTATACTACAACGATTTTCTGAGAAAATGCAGGTTGGCCGGTCATGCTTAGCATATTAGGATATAGGAAGACAGTTGACTGGAGTAATATTGTTCAGTTTTTAGTAGTTAACTAGAACTAACTATAACGATTTTTTATGCCTGTTAATTAGCACGGTGGAAGATGGATCAAGAGAAAAACTGGAGCCTTATTCAGGTTTGTCATCCGAGGAAAGCTACCAGAGTAGAGAACTTGAAAAGGTGCGAATATTTCTGCTTGGTCATACCATCTGGTTCTGGACTTCTAATAAGCTGCGTGGTTCTGATACTAACTTTCAATATGCAGGCTTCTCAGCAAGTTGCGAAGCACCTCTATGATTCAAAGGTTCAACCAACTACATTAATCCCGAAACAAGTCGGGAATATGTACACAGCGTCTCTATATGCTGCTTTGGCATCAGTGATGCATAACAAAAATGAAACTCTGGTAAAAAAGGAAAAGAACACTTAGCCTTGTCTTCATTGTATTTTCATGTGATAAGATTACCACTTCTCACCCTCCCCTTTTGACATGTCCAGGCAGGCCAAAGGATTGTCATGTTCTCATACGGCAGTGGCTTGACATCAACAATGTTCTCTTTCAAGATCAATGAAGGCCAGCATCCATTCATCCTATCAAACATTGCAGGCATACTGGATGTCTCCAAGAAACTGGAGTCCAGGCATGTGGTAAGTGCAGCTGCTGACCACTGCTTCATCTTGTTGACTGAAAACCTGAAACTAGTAGCTTGACATGAACGGATGAACCTGAATTCCTGATCAACAAATGCTTTGGGCCGCAGGTTGCGCCGGAGAAGTTCGTGGCGGCGCTGAAGCTGATGGAGCACCGGTACGGCGCCAAGGATTTCACGACGAGCCAGGACACGAGCCTGCTCGCTCCAGGCACCTACTACCTCACCCACGTCGACTCCATGTACAGGAGGTTCTACGCCGTCAAAGGTCAAGCCGTCACCGAAGTGTCCAATGGCCATTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA011729

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA011729&oldid=56552"